RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
NEDD4L-238ENST00000635997 NISCHQ9Y2I1 1504 aa26.17■■□□□ 1.78
NEDD4L-238ENST00000635997 SUPT5HO00267 1087 aaKnown RBP24.56■■□□□ 1.52
NEDD4L-238ENST00000635997 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
NEDD4L-238ENST00000635997 ABCC9O60706 1549 aa23.93■■□□□ 1.42
NEDD4L-238ENST00000635997 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
NEDD4L-238ENST00000635997 PABPN1Q86U42 306 aaKnown RBP eCLIP23.45■■□□□ 1.341e-13■■□□□ 13
NEDD4L-238ENST00000635997 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
NEDD4L-238ENST00000635997 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
NEDD4L-238ENST00000635997 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.23
NEDD4L-238ENST00000635997 TRIM41Q8WV44 630 aa22.58■■□□□ 1.2
NEDD4L-238ENST00000635997 APLP2Q06481 763 aa22.57■■□□□ 1.2
NEDD4L-238ENST00000635997 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.17
NEDD4L-238ENST00000635997 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
NEDD4L-238ENST00000635997 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
NEDD4L-238ENST00000635997 FBLN2P98095 1184 aa22.24■■□□□ 1.15
NEDD4L-238ENST00000635997 PPARGC1BQ86YN6 1023 aaKnown RBP22.16■■□□□ 1.14
NEDD4L-238ENST00000635997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.13
NEDD4L-238ENST00000635997 HNRNPUL2Q1KMD3 747 aaKnown RBP22.08■■□□□ 1.13
NEDD4L-238ENST00000635997 MYT1LQ9UL68 1186 aa22.05■■□□□ 1.12
NEDD4L-238ENST00000635997 RB1CC1Q8TDY2 1594 aa22■■□□□ 1.11
NEDD4L-238ENST00000635997 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
NEDD4L-238ENST00000635997 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
NEDD4L-238ENST00000635997 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
NEDD4L-238ENST00000635997 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
NEDD4L-238ENST00000635997 PELP1Q8IZL8 1130 aaKnown RBP21.81■■□□□ 1.08
NEDD4L-238ENST00000635997 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
NEDD4L-238ENST00000635997 NACADO15069 1562 aa21.62■■□□□ 1.05
NEDD4L-238ENST00000635997 ITGAEP38570 1179 aa21.61■■□□□ 1.05
NEDD4L-238ENST00000635997 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
NEDD4L-238ENST00000635997 NPM1P06748 294 aaKnown RBP eCLIP21.52■■□□□ 1.04
NEDD4L-238ENST00000635997 HRCP23327 699 aa21.49■■□□□ 1.03
NEDD4L-238ENST00000635997 ZCCHC6Q5VYS8 1495 aaKnown RBP21.44■■□□□ 1.02
NEDD4L-238ENST00000635997 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
NEDD4L-238ENST00000635997 TRHP20396 242 aaPredicted RBP21.31■■□□□ 1
NEDD4L-238ENST00000635997 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
NEDD4L-238ENST00000635997 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
NEDD4L-238ENST00000635997 MYT1Q01538 1121 aa21.24■□□□□ 0.99
NEDD4L-238ENST00000635997 ARID3CA6NKF2 412 aa21.22■□□□□ 0.99
NEDD4L-238ENST00000635997 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
NEDD4L-238ENST00000635997 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
NEDD4L-238ENST00000635997 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
NEDD4L-238ENST00000635997 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
NEDD4L-238ENST00000635997 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.96
NEDD4L-238ENST00000635997 P3H3Q8IVL6 736 aa21.08■□□□□ 0.96
NEDD4L-238ENST00000635997 ESF1Q9H501 851 aaKnown RBP21.07■□□□□ 0.96
NEDD4L-238ENST00000635997 POLR3GLQ9BT43 218 aa21.06■□□□□ 0.96
NEDD4L-238ENST00000635997 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
NEDD4L-238ENST00000635997 CENPBP07199 599 aaPredicted RBP20.97■□□□□ 0.95
NEDD4L-238ENST00000635997 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
NEDD4L-238ENST00000635997 CSRNP3Q8WYN3 585 aa20.84■□□□□ 0.93
NEDD4L-238ENST00000635997 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
NEDD4L-238ENST00000635997 CDK11AQ9UQ88 783 aaPredicted RBP20.83■□□□□ 0.93
NEDD4L-238ENST00000635997 BCANQ96GW7 911 aa20.81■□□□□ 0.92
NEDD4L-238ENST00000635997 ZNF777Q9ULD5 760 aaPredicted RBP20.79■□□□□ 0.92
NEDD4L-238ENST00000635997 TRIM52Q96A61 297 aa20.75■□□□□ 0.91
NEDD4L-238ENST00000635997 KCNH8Q96L42 1107 aa20.75■□□□□ 0.91
NEDD4L-238ENST00000635997 NEUROD1Q13562 356 aa20.71■□□□□ 0.91
NEDD4L-238ENST00000635997 ARID4BQ4LE39 1312 aaPredicted RBP20.67■□□□□ 0.9
NEDD4L-238ENST00000635997 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
NEDD4L-238ENST00000635997 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
NEDD4L-238ENST00000635997 CYB5RLQ6IPT4 315 aa20.64■□□□□ 0.89
NEDD4L-238ENST00000635997 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.89
NEDD4L-238ENST00000635997 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.89
NEDD4L-238ENST00000635997 MYO15BQ96JP2 1530 aa20.62■□□□□ 0.89
NEDD4L-238ENST00000635997 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
NEDD4L-238ENST00000635997 NEFLP07196 543 aa20.6■□□□□ 0.89
NEDD4L-238ENST00000635997 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
NEDD4L-238ENST00000635997 STAG3Q9UJ98 1225 aa20.56■□□□□ 0.88
NEDD4L-238ENST00000635997 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
NEDD4L-238ENST00000635997 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
NEDD4L-238ENST00000635997 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
NEDD4L-238ENST00000635997 PLEKHD1A6NEE1 506 aa20.43■□□□□ 0.86
NEDD4L-238ENST00000635997 DIEXFQ68CQ4 756 aaKnown RBP20.41■□□□□ 0.86
NEDD4L-238ENST00000635997 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
NEDD4L-238ENST00000635997 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
NEDD4L-238ENST00000635997 CHGAP10645 457 aaKnown RBP20.38■□□□□ 0.85
NEDD4L-238ENST00000635997 GTF3C3Q9Y5Q9 886 aa20.37■□□□□ 0.85
NEDD4L-238ENST00000635997 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
NEDD4L-238ENST00000635997 ERICH6Q7L0X2 663 aa20.35■□□□□ 0.85
NEDD4L-238ENST00000635997 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
NEDD4L-238ENST00000635997 SOGA1O94964 1423 aa20.28■□□□□ 0.84
NEDD4L-238ENST00000635997 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
NEDD4L-238ENST00000635997 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
NEDD4L-238ENST00000635997 TSPY4P0CV99 314 aa20.26■□□□□ 0.83
NEDD4L-238ENST00000635997 TSPY10P0CW01 314 aa20.26■□□□□ 0.83
NEDD4L-238ENST00000635997 MLECQ14165 292 aa20.25■□□□□ 0.83
NEDD4L-238ENST00000635997 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
NEDD4L-238ENST00000635997 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
NEDD4L-238ENST00000635997 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
NEDD4L-238ENST00000635997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.839e-7■■□□□ 14
NEDD4L-238ENST00000635997 CUX2O14529 1486 aa20.17■□□□□ 0.82
NEDD4L-238ENST00000635997 ACIN1Q9UKV3 1341 aaKnown RBP20.17■□□□□ 0.82
NEDD4L-238ENST00000635997 CC2D2AQ9P2K1 1620 aa20.14■□□□□ 0.81
NEDD4L-238ENST00000635997 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
NEDD4L-238ENST00000635997 C14orf37Q86TY3 774 aa20.13■□□□□ 0.81
NEDD4L-238ENST00000635997 JPH4Q96JJ6 628 aa20.09■□□□□ 0.81
NEDD4L-238ENST00000635997 MTUS2Q5JR59 1369 aa20.07■□□□□ 0.8
NEDD4L-238ENST00000635997 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
NEDD4L-238ENST00000635997 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms