RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 HSPA1LP34931 641 aa17.04■□□□□ 0.32
SPTAN1-220ENST00000630147 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
SPTAN1-220ENST00000630147 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
SPTAN1-220ENST00000630147 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
SPTAN1-220ENST00000630147 TNRQ92752 1358 aa17.02■□□□□ 0.31
SPTAN1-220ENST00000630147 KIF3BO15066 747 aa17.01■□□□□ 0.31
SPTAN1-220ENST00000630147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17■□□□□ 0.31
SPTAN1-220ENST00000630147 KDM5DQ9BY66 1539 aa16.99■□□□□ 0.31
SPTAN1-220ENST00000630147 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
SPTAN1-220ENST00000630147 DHX29Q7Z478 1369 aaKnown RBP16.98■□□□□ 0.31
SPTAN1-220ENST00000630147 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
SPTAN1-220ENST00000630147 PZPP20742 1482 aa16.97■□□□□ 0.31
SPTAN1-220ENST00000630147 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
SPTAN1-220ENST00000630147 CPS1P31327 1500 aa16.96■□□□□ 0.31
SPTAN1-220ENST00000630147 CCDC141Q6ZP82 1450 aa16.96■□□□□ 0.31
SPTAN1-220ENST00000630147 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.3
SPTAN1-220ENST00000630147 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
SPTAN1-220ENST00000630147 STRCP1A6NGW2 1772 aa16.94■□□□□ 0.3
SPTAN1-220ENST00000630147 CEP162Q5TB80 1403 aa16.94■□□□□ 0.3
SPTAN1-220ENST00000630147 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
SPTAN1-220ENST00000630147 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
SPTAN1-220ENST00000630147 ALKQ9UM73 1620 aa16.93■□□□□ 0.3
SPTAN1-220ENST00000630147 TOM1O60784 492 aa16.93■□□□□ 0.3
SPTAN1-220ENST00000630147 IQGAP1P46940 1657 aa16.92■□□□□ 0.3
SPTAN1-220ENST00000630147 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
SPTAN1-220ENST00000630147 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
SPTAN1-220ENST00000630147 ANKLE2Q86XL3 938 aa16.91■□□□□ 0.3
SPTAN1-220ENST00000630147 MIA2Q96PC5 1412 aa16.89■□□□□ 0.29
SPTAN1-220ENST00000630147 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
SPTAN1-220ENST00000630147 FAM135AQ9P2D6 1515 aa16.89■□□□□ 0.29
SPTAN1-220ENST00000630147 CEP152O94986 1710 aa16.88■□□□□ 0.29
SPTAN1-220ENST00000630147 DEPDC5O75140 1603 aa16.88■□□□□ 0.29
SPTAN1-220ENST00000630147 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
SPTAN1-220ENST00000630147 THEMISQ8N1K5 641 aaPredicted RBP16.87■□□□□ 0.29
SPTAN1-220ENST00000630147 ABCC3O15438 1527 aa16.86■□□□□ 0.29
SPTAN1-220ENST00000630147 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
SPTAN1-220ENST00000630147 RNF17Q9BXT8 1623 aaKnown RBP16.85■□□□□ 0.29
SPTAN1-220ENST00000630147 MED14O60244 1454 aa16.85■□□□□ 0.29
SPTAN1-220ENST00000630147 LRRC7Q96NW7 1537 aa16.84■□□□□ 0.29
SPTAN1-220ENST00000630147 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.28
SPTAN1-220ENST00000630147 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
SPTAN1-220ENST00000630147 MROH1Q8NDA8 1641 aa16.82■□□□□ 0.28
SPTAN1-220ENST00000630147 ERVK-7P63135 1459 aa16.82■□□□□ 0.28
SPTAN1-220ENST00000630147 SYNMO15061 1565 aa16.81■□□□□ 0.28
SPTAN1-220ENST00000630147 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
SPTAN1-220ENST00000630147 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
SPTAN1-220ENST00000630147 XIRP1Q702N8 1843 aaKnown RBP16.79■□□□□ 0.28
SPTAN1-220ENST00000630147 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
SPTAN1-220ENST00000630147 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
SPTAN1-220ENST00000630147 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.28
SPTAN1-220ENST00000630147 LRRC9Q6ZRR7 1453 aa16.75■□□□□ 0.27
SPTAN1-220ENST00000630147 SCAF11Q99590 1463 aaKnown RBP16.75■□□□□ 0.27
SPTAN1-220ENST00000630147 LTKP29376 864 aa16.74■□□□□ 0.27
SPTAN1-220ENST00000630147 PIK3C2BO00750 1634 aa16.72■□□□□ 0.27
SPTAN1-220ENST00000630147 KANK4Q5T7N3 995 aaPredicted RBP16.72■□□□□ 0.27
SPTAN1-220ENST00000630147 TXNDC2Q86VQ3 553 aa16.71■□□□□ 0.27
SPTAN1-220ENST00000630147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.275e-7■□□□□ 9.3
SPTAN1-220ENST00000630147 RGS17Q9UGC6 210 aaPredicted RBP16.71■□□□□ 0.27
SPTAN1-220ENST00000630147 RBM33Q96EV2 1170 aaKnown RBP16.7■□□□□ 0.26
SPTAN1-220ENST00000630147 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
SPTAN1-220ENST00000630147 CROCC2H7BZ55 1655 aa16.69■□□□□ 0.26
SPTAN1-220ENST00000630147 VPS8Q8N3P4 1428 aa16.69■□□□□ 0.26
SPTAN1-220ENST00000630147 ARHGAP23Q9P227 1491 aa16.68■□□□□ 0.26
SPTAN1-220ENST00000630147 SLIT1O75093 1534 aa16.68■□□□□ 0.26
SPTAN1-220ENST00000630147 PRDM15P57071 1507 aaPredicted RBP16.68■□□□□ 0.26
SPTAN1-220ENST00000630147 MYOM3Q5VTT5 1437 aa16.68■□□□□ 0.26
SPTAN1-220ENST00000630147 RRP7BPQ9NSQ0 103 aa16.67■□□□□ 0.26
SPTAN1-220ENST00000630147 KIF15Q9NS87 1388 aa16.66■□□□□ 0.26
SPTAN1-220ENST00000630147 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
SPTAN1-220ENST00000630147 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
SPTAN1-220ENST00000630147 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
SPTAN1-220ENST00000630147 EID1Q9Y6B2 187 aa16.64■□□□□ 0.25
SPTAN1-220ENST00000630147 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
SPTAN1-220ENST00000630147 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
SPTAN1-220ENST00000630147 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
SPTAN1-220ENST00000630147 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
SPTAN1-220ENST00000630147 ABCC5O15440 1437 aa16.62■□□□□ 0.25
SPTAN1-220ENST00000630147 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
SPTAN1-220ENST00000630147 MAP3K1Q13233 1512 aa16.61■□□□□ 0.25
SPTAN1-220ENST00000630147 EFCAB6Q5THR3 1501 aa16.61■□□□□ 0.25
SPTAN1-220ENST00000630147 POTEAQ6S8J7 498 aa16.61■□□□□ 0.25
SPTAN1-220ENST00000630147 ARHGAP31Q2M1Z3 1444 aa16.61■□□□□ 0.25
SPTAN1-220ENST00000630147 ERBINQ96RT1 1412 aa16.61■□□□□ 0.25
SPTAN1-220ENST00000630147 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
SPTAN1-220ENST00000630147 BCANQ96GW7 911 aa16.58■□□□□ 0.24
SPTAN1-220ENST00000630147 DAPK1P53355 1430 aa16.58■□□□□ 0.24
SPTAN1-220ENST00000630147 MYO5BQ9ULV0 1848 aa16.57■□□□□ 0.24
SPTAN1-220ENST00000630147 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
SPTAN1-220ENST00000630147 KANK1Q14678 1352 aa16.57■□□□□ 0.24
SPTAN1-220ENST00000630147 IDI1Q13907 227 aa16.57■□□□□ 0.24
SPTAN1-220ENST00000630147 PROSER2Q86WR7 435 aaPredicted RBP16.57■□□□□ 0.24
SPTAN1-220ENST00000630147 PHLPP1O60346 1717 aa16.56■□□□□ 0.24
SPTAN1-220ENST00000630147 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
SPTAN1-220ENST00000630147 KCNA6P17658 529 aa16.55■□□□□ 0.24
SPTAN1-220ENST00000630147 TET3O43151 1660 aa16.55■□□□□ 0.24
SPTAN1-220ENST00000630147 KDM5AP29375 1690 aaKnown RBP16.54■□□□□ 0.24
SPTAN1-220ENST00000630147 NWD1Q149M9 1564 aa16.53■□□□□ 0.24
SPTAN1-220ENST00000630147 GCC2Q8IWJ2 1684 aa16.52■□□□□ 0.23
SPTAN1-220ENST00000630147 LMTK2Q8IWU2 1503 aa16.51■□□□□ 0.23
SPTAN1-220ENST00000630147 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms