RNA–Protein interactions for RNA: ENST00000614239.1

LHX1-201, Transcript of LIM homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX1, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-201ENST00000614239 CEP170Q5SW79 1584 aa18.23■□□□□ 0.51
LHX1-201ENST00000614239 FGD1P98174 961 aa18.22■□□□□ 0.51
LHX1-201ENST00000614239 CRBNQ96SW2 442 aa18.22■□□□□ 0.51
LHX1-201ENST00000614239 PRDM10Q9NQV6 1147 aa18.22■□□□□ 0.51
LHX1-201ENST00000614239 SMG6Q86US8 1419 aaKnown RBP18.22■□□□□ 0.51
LHX1-201ENST00000614239 MAGI3Q5TCQ9 1506 aa18.22■□□□□ 0.51
LHX1-201ENST00000614239 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
LHX1-201ENST00000614239 BCL11BQ9C0K0 894 aaPredicted RBP18.21■□□□□ 0.51
LHX1-201ENST00000614239 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
LHX1-201ENST00000614239 HNRNPMP52272 730 aaKnown RBP eCLIP18.19■□□□□ 0.5
LHX1-201ENST00000614239 KIAA0556O60303 1618 aa18.19■□□□□ 0.5
LHX1-201ENST00000614239 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
LHX1-201ENST00000614239 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.5
LHX1-201ENST00000614239 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
LHX1-201ENST00000614239 CNTLNQ9NXG0 1405 aa18.18■□□□□ 0.5
LHX1-201ENST00000614239 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
LHX1-201ENST00000614239 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
LHX1-201ENST00000614239 EPRSP07814 1512 aaKnown RBP18.17■□□□□ 0.5
LHX1-201ENST00000614239 CLCN1P35523 988 aa18.17■□□□□ 0.5
LHX1-201ENST00000614239 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
LHX1-201ENST00000614239 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
LHX1-201ENST00000614239 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
LHX1-201ENST00000614239 BECN1Q14457 450 aa18.16■□□□□ 0.5
LHX1-201ENST00000614239 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
LHX1-201ENST00000614239 CDCA7LQ96GN5 454 aa18.14■□□□□ 0.49
LHX1-201ENST00000614239 ESPNB1AK53 854 aa18.14■□□□□ 0.49
LHX1-201ENST00000614239 KIAA1211Q6ZU35 1233 aa18.13■□□□□ 0.49
LHX1-201ENST00000614239 JPH4Q96JJ6 628 aa18.13■□□□□ 0.49
LHX1-201ENST00000614239 NUP160Q12769 1436 aa18.13■□□□□ 0.49
LHX1-201ENST00000614239 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
LHX1-201ENST00000614239 PTPN23Q9H3S7 1636 aa18.12■□□□□ 0.49
LHX1-201ENST00000614239 CCDC7Q96M83 1385 aa18.12■□□□□ 0.49
LHX1-201ENST00000614239 BBXQ8WY36 941 aaPredicted RBP18.12■□□□□ 0.49
LHX1-201ENST00000614239 PDCL3Q9H2J4 239 aa18.12■□□□□ 0.49
LHX1-201ENST00000614239 SUPT6HQ7KZ85 1726 aaKnown RBP18.12■□□□□ 0.49
LHX1-201ENST00000614239 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
LHX1-201ENST00000614239 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
LHX1-201ENST00000614239 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
LHX1-201ENST00000614239 NUP155O75694 1391 aa18.1■□□□□ 0.49
LHX1-201ENST00000614239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.49
LHX1-201ENST00000614239 NUP153P49790 1475 aaKnown RBP18.08■□□□□ 0.49
LHX1-201ENST00000614239 ARHGEF11O15085 1522 aa18.08■□□□□ 0.48
LHX1-201ENST00000614239 MAPK8IP2Q13387 824 aaPredicted RBP18.07■□□□□ 0.48
LHX1-201ENST00000614239 PLB1Q6P1J6 1458 aa18.06■□□□□ 0.48
LHX1-201ENST00000614239 C20orf194Q5TEA3 1177 aa18.06■□□□□ 0.48
LHX1-201ENST00000614239 RAPGEF6Q8TEU7 1601 aa18.06■□□□□ 0.48
LHX1-201ENST00000614239 KDM6BO15054 1643 aa18.04■□□□□ 0.48
LHX1-201ENST00000614239 CHMP4BQ9H444 224 aaKnown RBP18.04■□□□□ 0.48
LHX1-201ENST00000614239 UPF2Q9HAU5 1272 aaKnown RBP18.04■□□□□ 0.48
LHX1-201ENST00000614239 R3HCC1Q9Y3T6 440 aaKnown RBP18.04■□□□□ 0.48
LHX1-201ENST00000614239 RNF123Q5XPI4 1314 aa18.03■□□□□ 0.48
LHX1-201ENST00000614239 PDIA4P13667 645 aaKnown RBP18.03■□□□□ 0.48
LHX1-201ENST00000614239 ANP32BQ92688 251 aaKnown RBP18.03■□□□□ 0.48
LHX1-201ENST00000614239 USP47Q96K76 1375 aa18.02■□□□□ 0.48
LHX1-201ENST00000614239 TPM2P07951 284 aa18.02■□□□□ 0.47
LHX1-201ENST00000614239 MSNP26038 577 aaKnown RBP18.02■□□□□ 0.47
LHX1-201ENST00000614239 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.47
LHX1-201ENST00000614239 CALD1Q05682 793 aaKnown RBP18.01■□□□□ 0.47
LHX1-201ENST00000614239 PNISRQ8TF01 805 aaKnown RBP17.99■□□□□ 0.47
LHX1-201ENST00000614239 ANKRD30BQ9BXX2 1392 aa17.99■□□□□ 0.47
LHX1-201ENST00000614239 C8orf34Q49A92 452 aa17.99■□□□□ 0.47
LHX1-201ENST00000614239 TRAK2O60296 914 aa17.98■□□□□ 0.47
LHX1-201ENST00000614239 TNNT2P45379 298 aaPredicted RBP17.98■□□□□ 0.47
LHX1-201ENST00000614239 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
LHX1-201ENST00000614239 CHD1O14646 1710 aa17.98■□□□□ 0.47
LHX1-201ENST00000614239 ABCC5O15440 1437 aa17.98■□□□□ 0.47
LHX1-201ENST00000614239 DAPK1P53355 1430 aa17.98■□□□□ 0.47
LHX1-201ENST00000614239 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
LHX1-201ENST00000614239 MRE11P49959 708 aa17.97■□□□□ 0.47
LHX1-201ENST00000614239 GRPEL1Q9HAV7 217 aa17.97■□□□□ 0.47
LHX1-201ENST00000614239 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
LHX1-201ENST00000614239 PLCD3Q8N3E9 789 aa17.97■□□□□ 0.47
LHX1-201ENST00000614239 KTN1Q86UP2 1357 aaKnown RBP17.96■□□□□ 0.47
LHX1-201ENST00000614239 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
LHX1-201ENST00000614239 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
LHX1-201ENST00000614239 PRDM4Q9UKN5 801 aa17.94■□□□□ 0.46
LHX1-201ENST00000614239 VGLL3A8MV65 326 aa17.94■□□□□ 0.46
LHX1-201ENST00000614239 DENND4BO75064 1496 aaPredicted RBP17.92■□□□□ 0.46
LHX1-201ENST00000614239 ANKRD30AQ9BXX3 1397 aa17.92■□□□□ 0.46
LHX1-201ENST00000614239 MCM4P33991 863 aa17.91■□□□□ 0.46
LHX1-201ENST00000614239 SEC24BO95487 1268 aa17.91■□□□□ 0.46
LHX1-201ENST00000614239 NCLP19338 710 aaKnown RBP17.91■□□□□ 0.46
LHX1-201ENST00000614239 MIA2Q96PC5 1412 aa17.91■□□□□ 0.46
LHX1-201ENST00000614239 NAP1L2Q9ULW6 460 aaPredicted RBP17.91■□□□□ 0.46
LHX1-201ENST00000614239 ROCK2O75116 1388 aaKnown RBP17.91■□□□□ 0.46
LHX1-201ENST00000614239 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
LHX1-201ENST00000614239 CDK11BP21127 795 aaKnown RBP17.9■□□□□ 0.46
LHX1-201ENST00000614239 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.45
LHX1-201ENST00000614239 ABCA8O94911 1581 aa17.89■□□□□ 0.45
LHX1-201ENST00000614239 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
LHX1-201ENST00000614239 DNTTIP2Q5QJE6 756 aaKnown RBP17.89■□□□□ 0.45
LHX1-201ENST00000614239 NCOA1Q15788 1441 aa17.88■□□□□ 0.45
LHX1-201ENST00000614239 KIF14Q15058 1648 aa17.87■□□□□ 0.45
LHX1-201ENST00000614239 PTPRGP23470 1445 aa17.87■□□□□ 0.45
LHX1-201ENST00000614239 ANKRD50Q9ULJ7 1429 aa17.87■□□□□ 0.45
LHX1-201ENST00000614239 ATP10BO94823 1461 aa17.87■□□□□ 0.45
LHX1-201ENST00000614239 PAXIP1Q6ZW49 1069 aaPredicted RBP17.87■□□□□ 0.45
LHX1-201ENST00000614239 UQCRHLA0A096LP55 91 aa17.86■□□□□ 0.45
LHX1-201ENST00000614239 UQCRHP07919 91 aa17.86■□□□□ 0.45
LHX1-201ENST00000614239 ERCC6L2Q5T890 1561 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms