RNA–Protein interactions for RNA: ENST00000613953.4

TPI1-210, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-210ENST00000613953 KDM5DQ9BY66 1539 aa37.08■■■■□ 3.53
TPI1-210ENST00000613953 ZNF142P52746 1687 aaPredicted RBP37.07■■■■□ 3.52
TPI1-210ENST00000613953 CAMSAP1Q5T5Y3 1602 aa37.06■■■■□ 3.52
TPI1-210ENST00000613953 CEP170BQ9Y4F5 1589 aaPredicted RBP37.04■■■■□ 3.52
TPI1-210ENST00000613953 WASHC2CQ9Y4E1 1318 aa37■■■■□ 3.51
TPI1-210ENST00000613953 PZPP20742 1482 aa36.99■■■■□ 3.51
TPI1-210ENST00000613953 PLA2R1Q13018 1463 aa36.96■■■■□ 3.51
TPI1-210ENST00000613953 RNF17Q9BXT8 1623 aaKnown RBP36.96■■■■□ 3.51
TPI1-210ENST00000613953 PTPN23Q9H3S7 1636 aa36.94■■■■□ 3.5
TPI1-210ENST00000613953 EIF2AK4Q9P2K8 1649 aaKnown RBP36.94■■■■□ 3.5
TPI1-210ENST00000613953 A2ML1A8K2U0 1454 aa36.93■■■■□ 3.5
TPI1-210ENST00000613953 SHANK2Q9UPX8 1470 aa36.92■■■■□ 3.5
TPI1-210ENST00000613953 TNRQ92752 1358 aa36.91■■■■□ 3.5
TPI1-210ENST00000613953 FBXO31Q5XUX0 539 aaPredicted RBP36.91■■■■□ 3.5
TPI1-210ENST00000613953 FGD6Q6ZV73 1430 aa36.9■■■■□ 3.5
TPI1-210ENST00000613953 TCOF1Q13428 1488 aaKnown RBP36.9■■■■□ 3.5
TPI1-210ENST00000613953 ABCC5O15440 1437 aa36.89■■■■□ 3.5
TPI1-210ENST00000613953 NCKAP5LQ9HCH0 1330 aa36.89■■■■□ 3.5
TPI1-210ENST00000613953 CROCC2H7BZ55 1655 aa36.88■■■■□ 3.49
TPI1-210ENST00000613953 DUOX2Q9NRD8 1548 aa36.88■■■■□ 3.49
TPI1-210ENST00000613953 PKD2Q13563 968 aa36.87■■■■□ 3.49
TPI1-210ENST00000613953 DNMT1P26358 1616 aaKnown RBP36.86■■■■□ 3.49
TPI1-210ENST00000613953 ABCC3O15438 1527 aa36.86■■■■□ 3.49
TPI1-210ENST00000613953 ZC3H13Q5T200 1668 aaKnown RBP36.85■■■■□ 3.49
TPI1-210ENST00000613953 LTBP4Q8N2S1 1624 aa36.84■■■■□ 3.49
TPI1-210ENST00000613953 MROH1Q8NDA8 1641 aa36.83■■■■□ 3.49
TPI1-210ENST00000613953 KIF15Q9NS87 1388 aa36.83■■■■□ 3.49
TPI1-210ENST00000613953 DAPK1P53355 1430 aa36.83■■■■□ 3.49
TPI1-210ENST00000613953 NLRP1Q9C000 1473 aa36.78■■■■□ 3.48
TPI1-210ENST00000613953 ERBINQ96RT1 1412 aa36.78■■■■□ 3.48
TPI1-210ENST00000613953 RRP7BPQ9NSQ0 103 aa36.75■■■■□ 3.47
TPI1-210ENST00000613953 SPATA31D1Q6ZQQ2 1576 aa36.72■■■■□ 3.47
TPI1-210ENST00000613953 PRDM15P57071 1507 aaPredicted RBP36.71■■■■□ 3.47
TPI1-210ENST00000613953 IQSEC2Q5JU85 1478 aa36.7■■■■□ 3.47
TPI1-210ENST00000613953 ZNF335Q9H4Z2 1342 aaPredicted RBP36.69■■■■□ 3.46
TPI1-210ENST00000613953 ERVK-7P63135 1459 aa36.69■■■■□ 3.46
TPI1-210ENST00000613953 CEP152O94986 1710 aa36.68■■■■□ 3.46
TPI1-210ENST00000613953 UGGT1Q9NYU2 1555 aa36.67■■■■□ 3.46
TPI1-210ENST00000613953 ANKRD30AQ9BXX3 1397 aa36.66■■■■□ 3.46
TPI1-210ENST00000613953 POLR1AO95602 1720 aaPredicted RBP36.65■■■■□ 3.46
TPI1-210ENST00000613953 THEMISQ8N1K5 641 aaPredicted RBP36.65■■■■□ 3.46
TPI1-210ENST00000613953 NEURL4Q96JN8 1562 aa36.65■■■■□ 3.46
TPI1-210ENST00000613953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.64■■■■□ 3.464e-8■□□□□ 9.8
TPI1-210ENST00000613953 CHIC2Q9UKJ5 165 aa36.63■■■■□ 3.45
TPI1-210ENST00000613953 DEPDC5O75140 1603 aa36.63■■■■□ 3.45
TPI1-210ENST00000613953 ARHGAP31Q2M1Z3 1444 aa36.61■■■■□ 3.45
TPI1-210ENST00000613953 ADGRL2O95490 1459 aa36.58■■■■□ 3.45
TPI1-210ENST00000613953 ANKLE2Q86XL3 938 aa36.58■■■■□ 3.45
TPI1-210ENST00000613953 FAM50AQ14320 339 aaKnown RBP36.56■■■■□ 3.44
TPI1-210ENST00000613953 KANK1Q14678 1352 aa36.55■■■■□ 3.44
TPI1-210ENST00000613953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.55■■■■□ 3.44
TPI1-210ENST00000613953 MED14O60244 1454 aa36.52■■■■□ 3.44
TPI1-210ENST00000613953 VWDEQ8N2E2 1590 aa36.49■■■■□ 3.43
TPI1-210ENST00000613953 LMTK2Q8IWU2 1503 aa36.49■■■■□ 3.43
TPI1-210ENST00000613953 NPHP4O75161 1426 aaPredicted RBP36.48■■■■□ 3.43
TPI1-210ENST00000613953 UBR1Q8IWV7 1749 aa36.45■■■■□ 3.43
TPI1-210ENST00000613953 CFAP65Q6ZU64 1925 aaKnown RBP36.45■■■■□ 3.43
TPI1-210ENST00000613953 CPS1P31327 1500 aa36.42■■■■□ 3.42
TPI1-210ENST00000613953 IQGAP1P46940 1657 aa36.41■■■■□ 3.42
TPI1-210ENST00000613953 ANKRD50Q9ULJ7 1429 aa36.4■■■■□ 3.42
TPI1-210ENST00000613953 EFCAB6Q5THR3 1501 aa36.37■■■■□ 3.41
TPI1-210ENST00000613953 UBAP1LF5GYI3 381 aa36.37■■■■□ 3.41
TPI1-210ENST00000613953 SLIT1O75093 1534 aa36.35■■■■□ 3.41
TPI1-210ENST00000613953 ARHGAP23Q9P227 1491 aa36.35■■■■□ 3.41
TPI1-210ENST00000613953 SCAF11Q99590 1463 aaKnown RBP36.34■■■■□ 3.41
TPI1-210ENST00000613953 PIK3C2BO00750 1634 aa36.33■■■■□ 3.41
TPI1-210ENST00000613953 NOS1P29475 1434 aa36.3■■■■□ 3.4
TPI1-210ENST00000613953 SYNMO15061 1565 aa36.29■■■■□ 3.4
TPI1-210ENST00000613953 ROCK1Q13464 1354 aa36.28■■■■□ 3.4
TPI1-210ENST00000613953 LTKP29376 864 aa36.26■■■■□ 3.4
TPI1-210ENST00000613953 KDM5AP29375 1690 aaKnown RBP36.25■■■■□ 3.39
TPI1-210ENST00000613953 TXNDC2Q86VQ3 553 aa36.25■■■■□ 3.39
TPI1-210ENST00000613953 RPRD2Q5VT52 1461 aaKnown RBP36.25■■■■□ 3.39
TPI1-210ENST00000613953 TMEM2Q9UHN6 1383 aa36.25■■■■□ 3.39
TPI1-210ENST00000613953 IDI1Q13907 227 aa36.24■■■■□ 3.39
TPI1-210ENST00000613953 STAG3Q9UJ98 1225 aa36.23■■■■□ 3.39
TPI1-210ENST00000613953 UNC13BO14795 1591 aa36.22■■■■□ 3.39
TPI1-210ENST00000613953 EID1Q9Y6B2 187 aa36.22■■■■□ 3.39
TPI1-210ENST00000613953 PPARGC1BQ86YN6 1023 aaKnown RBP36.21■■■■□ 3.39
TPI1-210ENST00000613953 TET3O43151 1660 aa36.2■■■■□ 3.38
TPI1-210ENST00000613953 ADGRB3O60242 1522 aa36.17■■■■□ 3.38
TPI1-210ENST00000613953 STRCP1A6NGW2 1772 aa36.17■■■■□ 3.38
TPI1-210ENST00000613953 SLC52A1Q9NWF4 448 aa36.17■■■■□ 3.38
TPI1-210ENST00000613953 TOM1O60784 492 aa36.15■■■■□ 3.38
TPI1-210ENST00000613953 LRRC7Q96NW7 1537 aa36.14■■■■□ 3.38
TPI1-210ENST00000613953 GCC2Q8IWJ2 1684 aa36.12■■■■□ 3.37
TPI1-210ENST00000613953 ITGAEP38570 1179 aa36.11■■■■□ 3.37
TPI1-210ENST00000613953 DISP3Q9P2K9 1392 aa36.09■■■■□ 3.37
TPI1-210ENST00000613953 PIP4K2BP78356 416 aa36.07■■■■□ 3.37
TPI1-210ENST00000613953 IQGAP3Q86VI3 1631 aa36.07■■■■□ 3.36
TPI1-210ENST00000613953 SCAF1Q9H7N4 1312 aaKnown RBP36.07■■■■□ 3.36
TPI1-210ENST00000613953 ALKQ9UM73 1620 aa36.05■■■■□ 3.36
TPI1-210ENST00000613953 E9PCH4 1651 aa36.02■■■■□ 3.36
TPI1-210ENST00000613953 RRBP1Q9P2E9 1410 aaKnown RBP36.01■■■■□ 3.36
TPI1-210ENST00000613953 NUP155O75694 1391 aa36.01■■■■□ 3.35
TPI1-210ENST00000613953 ZFYVE9O95405 1425 aa35.97■■■■□ 3.35
TPI1-210ENST00000613953 HSPA1LP34931 641 aa35.97■■■■□ 3.35
TPI1-210ENST00000613953 TMEM131LA2VDJ0 1609 aa35.97■■■■□ 3.35
TPI1-210ENST00000613953 SLC26A8Q96RN1 970 aa35.93■■■■□ 3.34
TPI1-210ENST00000613953 RIMS2Q9UQ26 1411 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms