RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 C9orf84Q5VXU9 1444 aa7.56□□□□□ -1.2
SSX9-202ENST00000608568 TRAPPC8Q9Y2L5 1435 aa7.56□□□□□ -1.2
SSX9-202ENST00000608568 PLEKHD1A6NEE1 506 aa7.56□□□□□ -1.2
SSX9-202ENST00000608568 ABCB7O75027 752 aa7.56□□□□□ -1.2
SSX9-202ENST00000608568 ZNF142P52746 1687 aaPredicted RBP7.55□□□□□ -1.2
SSX9-202ENST00000608568 ATP10AO60312 1499 aa7.55□□□□□ -1.2
SSX9-202ENST00000608568 EHBP1L1Q8N3D4 1523 aa7.54□□□□□ -1.2
SSX9-202ENST00000608568 MYO3AQ8NEV4 1616 aa7.54□□□□□ -1.2
SSX9-202ENST00000608568 ILDR1Q86SU0 546 aaPredicted RBP7.54□□□□□ -1.2
SSX9-202ENST00000608568 ATP1B4Q9UN42 357 aaPredicted RBP7.54□□□□□ -1.2
SSX9-202ENST00000608568 ATP7AQ04656 1500 aa7.53□□□□□ -1.2
SSX9-202ENST00000608568 ANP32EQ9BTT0 268 aa7.53□□□□□ -1.2
SSX9-202ENST00000608568 ARID4BQ4LE39 1312 aaPredicted RBP7.52□□□□□ -1.2
SSX9-202ENST00000608568 GPATCH8Q9UKJ3 1502 aaKnown RBP7.52□□□□□ -1.2
SSX9-202ENST00000608568 CROCC2H7BZ55 1655 aa7.52□□□□□ -1.21
SSX9-202ENST00000608568 MLH3Q9UHC1 1453 aa7.52□□□□□ -1.21
SSX9-202ENST00000608568 CHRDL2Q6WN34 429 aa7.52□□□□□ -1.21
SSX9-202ENST00000608568 CEP152O94986 1710 aa7.52□□□□□ -1.21
SSX9-202ENST00000608568 POLR1AO95602 1720 aaPredicted RBP7.52□□□□□ -1.21
SSX9-202ENST00000608568 AGLP35573 1532 aa7.52□□□□□ -1.21
SSX9-202ENST00000608568 CEP162Q5TB80 1403 aa7.52□□□□□ -1.21
SSX9-202ENST00000608568 VASPP50552 380 aaPredicted RBP7.51□□□□□ -1.21
SSX9-202ENST00000608568 SPDYE4A6NLX3 237 aa7.5□□□□□ -1.21
SSX9-202ENST00000608568 MLECQ14165 292 aa7.5□□□□□ -1.21
SSX9-202ENST00000608568 HSPA2P54652 639 aa7.49□□□□□ -1.21
SSX9-202ENST00000608568 AFAP1Q8N556 730 aa7.49□□□□□ -1.21
SSX9-202ENST00000608568 SP7Q8TDD2 431 aaPredicted RBP7.49□□□□□ -1.21
SSX9-202ENST00000608568 EFCAB2Q5VUJ9 269 aa7.48□□□□□ -1.21
SSX9-202ENST00000608568 PROM2Q8N271 834 aa7.47□□□□□ -1.21
SSX9-202ENST00000608568 CAMSAP2Q08AD1 1489 aa7.47□□□□□ -1.21
SSX9-202ENST00000608568 MROH1Q8NDA8 1641 aa7.46□□□□□ -1.21
SSX9-202ENST00000608568 CEBPAP49715 358 aaPredicted RBP7.46□□□□□ -1.22
SSX9-202ENST00000608568 IFNLR1Q8IU57 520 aaPredicted RBP7.46□□□□□ -1.22
SSX9-202ENST00000608568 MYO5BQ9ULV0 1848 aa7.45□□□□□ -1.22
SSX9-202ENST00000608568 RNF17Q9BXT8 1623 aaKnown RBP7.45□□□□□ -1.22
SSX9-202ENST00000608568 NCOA2Q15596 1464 aa7.45□□□□□ -1.22
SSX9-202ENST00000608568 MBD5Q9P267 1494 aa7.45□□□□□ -1.22
SSX9-202ENST00000608568 PKD2Q13563 968 aa7.45□□□□□ -1.22
SSX9-202ENST00000608568 TPRNQ4KMQ1 711 aa7.45□□□□□ -1.22
SSX9-202ENST00000608568 DIEXFQ68CQ4 756 aaKnown RBP7.45□□□□□ -1.22
SSX9-202ENST00000608568 STRCP1A6NGW2 1772 aa7.45□□□□□ -1.22
SSX9-202ENST00000608568 ARHGEF5Q12774 1597 aa7.45□□□□□ -1.22
SSX9-202ENST00000608568 CEP170BQ9Y4F5 1589 aaPredicted RBP7.45□□□□□ -1.22
SSX9-202ENST00000608568 CAMSAP1Q5T5Y3 1602 aa7.45□□□□□ -1.22
SSX9-202ENST00000608568 A2MP01023 1474 aa7.44□□□□□ -1.22
SSX9-202ENST00000608568 MYT1LQ9UL68 1186 aa7.44□□□□□ -1.22
SSX9-202ENST00000608568 CDK11AQ9UQ88 783 aaPredicted RBP7.44□□□□□ -1.22
SSX9-202ENST00000608568 MTUS2Q5JR59 1369 aa7.44□□□□□ -1.22
SSX9-202ENST00000608568 NEURL4Q96JN8 1562 aa7.43□□□□□ -1.22
SSX9-202ENST00000608568 MAST1Q9Y2H9 1570 aa7.43□□□□□ -1.22
SSX9-202ENST00000608568 DNMT1P26358 1616 aaKnown RBP7.43□□□□□ -1.22
SSX9-202ENST00000608568 LTBP4Q8N2S1 1624 aa7.43□□□□□ -1.22
SSX9-202ENST00000608568 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.43□□□□□ -1.22
SSX9-202ENST00000608568 ZC3H13Q5T200 1668 aaKnown RBP7.43□□□□□ -1.22
SSX9-202ENST00000608568 ZNF644Q9H582 1327 aaPredicted RBP7.43□□□□□ -1.22
SSX9-202ENST00000608568 UHRF1BP1Q6BDS2 1440 aa7.43□□□□□ -1.22
SSX9-202ENST00000608568 KIAA1107Q9UPP5 1409 aa7.43□□□□□ -1.22
SSX9-202ENST00000608568 PLEKHH2Q8IVE3 1493 aa7.43□□□□□ -1.22
SSX9-202ENST00000608568 EIF2AK4Q9P2K8 1649 aaKnown RBP7.42□□□□□ -1.22
SSX9-202ENST00000608568 HNRNPMP52272 730 aaKnown RBP eCLIP7.42□□□□□ -1.22
SSX9-202ENST00000608568 BBXQ8WY36 941 aaPredicted RBP7.42□□□□□ -1.22
SSX9-202ENST00000608568 ZNF777Q9ULD5 760 aaPredicted RBP7.42□□□□□ -1.22
SSX9-202ENST00000608568 KDM2AQ9Y2K7 1162 aa7.42□□□□□ -1.22
SSX9-202ENST00000608568 XIRP1Q702N8 1843 aaKnown RBP7.42□□□□□ -1.22
SSX9-202ENST00000608568 CCNB3Q8WWL7 1395 aa7.42□□□□□ -1.22
SSX9-202ENST00000608568 CCDC141Q6ZP82 1450 aa7.42□□□□□ -1.22
SSX9-202ENST00000608568 NCOA1Q15788 1441 aa7.41□□□□□ -1.22
SSX9-202ENST00000608568 VPS8Q8N3P4 1428 aa7.41□□□□□ -1.22
SSX9-202ENST00000608568 LRRC9Q6ZRR7 1453 aa7.41□□□□□ -1.22
SSX9-202ENST00000608568 PTPN23Q9H3S7 1636 aa7.41□□□□□ -1.22
SSX9-202ENST00000608568 KDM5DQ9BY66 1539 aa7.4□□□□□ -1.22
SSX9-202ENST00000608568 DEPDC5O75140 1603 aa7.4□□□□□ -1.22
SSX9-202ENST00000608568 UBR1Q8IWV7 1749 aa7.4□□□□□ -1.23
SSX9-202ENST00000608568 PTPRKQ15262 1439 aa7.39□□□□□ -1.23
SSX9-202ENST00000608568 CNTLNQ9NXG0 1405 aa7.39□□□□□ -1.23
SSX9-202ENST00000608568 SPAG9O60271 1321 aaKnown RBP7.39□□□□□ -1.23
SSX9-202ENST00000608568 LOC105371045A0A1W2PR82 267 aa7.39□□□□□ -1.23
SSX9-202ENST00000608568 NPATQ14207 1427 aa7.38□□□□□ -1.23
SSX9-202ENST00000608568 IQGAP1P46940 1657 aa7.38□□□□□ -1.23
SSX9-202ENST00000608568 ABCC3O15438 1527 aa7.37□□□□□ -1.23
SSX9-202ENST00000608568 FBXO41Q8TF61 875 aa7.37□□□□□ -1.23
SSX9-202ENST00000608568 CFDP1Q9UEE9 299 aaPredicted RBP7.37□□□□□ -1.23
SSX9-202ENST00000608568 MAP3K1Q13233 1512 aa7.37□□□□□ -1.23
SSX9-202ENST00000608568 TCOF1Q13428 1488 aaKnown RBP7.36□□□□□ -1.23
SSX9-202ENST00000608568 MKRN4PQ13434 485 aaPredicted RBP7.36□□□□□ -1.23
SSX9-202ENST00000608568 PAXIP1Q6ZW49 1069 aaPredicted RBP7.36□□□□□ -1.23
SSX9-202ENST00000608568 SPATA31D1Q6ZQQ2 1576 aa7.36□□□□□ -1.23
SSX9-202ENST00000608568 PRDM15P57071 1507 aaPredicted RBP7.36□□□□□ -1.23
SSX9-202ENST00000608568 FAM135AQ9P2D6 1515 aa7.36□□□□□ -1.23
SSX9-202ENST00000608568 PZPP20742 1482 aa7.36□□□□□ -1.23
SSX9-202ENST00000608568 RTEL1-TNFRSF6BF6WH68 1400 aa7.35□□□□□ -1.23
SSX9-202ENST00000608568 ZMYM3Q14202 1370 aa7.35□□□□□ -1.23
SSX9-202ENST00000608568 PIK3C2BO00750 1634 aa7.35□□□□□ -1.23
SSX9-202ENST00000608568 ALKQ9UM73 1620 aa7.35□□□□□ -1.23
SSX9-202ENST00000608568 A2ML1A8K2U0 1454 aa7.35□□□□□ -1.23
SSX9-202ENST00000608568 PTPRTO14522 1441 aa7.35□□□□□ -1.23
SSX9-202ENST00000608568 GCC2Q8IWJ2 1684 aa7.35□□□□□ -1.23
SSX9-202ENST00000608568 VWDEQ8N2E2 1590 aa7.34□□□□□ -1.23
SSX9-202ENST00000608568 KANK4Q5T7N3 995 aaPredicted RBP7.34□□□□□ -1.23
SSX9-202ENST00000608568 PLA2R1Q13018 1463 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms