RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
SSX9-202ENST00000608568 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
SSX9-202ENST00000608568 NISCHQ9Y2I1 1504 aa11.72□□□□□ -0.53
SSX9-202ENST00000608568 SENP3Q9H4L4 574 aaPredicted RBP11.32□□□□□ -0.6
SSX9-202ENST00000608568 PHF23Q9BUL5 403 aaPredicted RBP11.07□□□□□ -0.64
SSX9-202ENST00000608568 CCDC180Q9P1Z9 1646 aa10.63□□□□□ -0.71
SSX9-202ENST00000608568 POTEDQ86YR6 584 aa10.58□□□□□ -0.72
SSX9-202ENST00000608568 FOXD1Q16676 465 aa10.53□□□□□ -0.72
SSX9-202ENST00000608568 ABCC9O60706 1549 aa10.48□□□□□ -0.73
SSX9-202ENST00000608568 MSH5O43196 834 aa10.12□□□□□ -0.79
SSX9-202ENST00000608568 UNC13AQ9UPW8 1703 aa10.08□□□□□ -0.8
SSX9-202ENST00000608568 RB1CC1Q8TDY2 1594 aa9.99□□□□□ -0.81
SSX9-202ENST00000608568 NACADO15069 1562 aa9.91□□□□□ -0.82
SSX9-202ENST00000608568 PLPPR3Q6T4P5 718 aa9.88□□□□□ -0.83
SSX9-202ENST00000608568 BICRAQ9NZM4 1560 aa9.81□□□□□ -0.84
SSX9-202ENST00000608568 PIAS4Q8N2W9 510 aaPredicted RBP9.77□□□□□ -0.85
SSX9-202ENST00000608568 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.85
SSX9-202ENST00000608568 ZCCHC6Q5VYS8 1495 aaKnown RBP9.76□□□□□ -0.85
SSX9-202ENST00000608568 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
SSX9-202ENST00000608568 SCRIBQ14160 1630 aa9.69□□□□□ -0.86
SSX9-202ENST00000608568 DCAF8L2P0C7V8 631 aa9.67□□□□□ -0.86
SSX9-202ENST00000608568 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
SSX9-202ENST00000608568 DCAF1Q9Y4B6 1507 aa9.66□□□□□ -0.86
SSX9-202ENST00000608568 CC2D2AQ9P2K1 1620 aa9.55□□□□□ -0.88
SSX9-202ENST00000608568 SHROOM4Q9ULL8 1493 aa9.52□□□□□ -0.89
SSX9-202ENST00000608568 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
SSX9-202ENST00000608568 PPP6R1Q9UPN7 881 aa9.48□□□□□ -0.89
SSX9-202ENST00000608568 ADRA2BP18089 450 aa9.44□□□□□ -0.9
SSX9-202ENST00000608568 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
SSX9-202ENST00000608568 EHMT2Q96KQ7 1210 aa9.35□□□□□ -0.91
SSX9-202ENST00000608568 KCNA4P22459 653 aa9.26□□□□□ -0.93
SSX9-202ENST00000608568 SMARCA4P51532 1647 aa9.23□□□□□ -0.93
SSX9-202ENST00000608568 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
SSX9-202ENST00000608568 ATAD2BQ9ULI0 1458 aa9.12□□□□□ -0.95
SSX9-202ENST00000608568 SMARCA2P51531 1590 aa9.1□□□□□ -0.95
SSX9-202ENST00000608568 KIF21AQ7Z4S6 1674 aa9.1□□□□□ -0.95
SSX9-202ENST00000608568 PEG3Q9GZU2 1588 aa9.09□□□□□ -0.95
SSX9-202ENST00000608568 NCAPD3P42695 1498 aa9.08□□□□□ -0.96
SSX9-202ENST00000608568 MROH2BQ7Z745 1585 aa9.08□□□□□ -0.96
SSX9-202ENST00000608568 BAZ1AQ9NRL2 1556 aaPredicted RBP9.08□□□□□ -0.96
SSX9-202ENST00000608568 NESP48681 1621 aa9.07□□□□□ -0.96
SSX9-202ENST00000608568 THOC2Q8NI27 1593 aaKnown RBP9.06□□□□□ -0.96
SSX9-202ENST00000608568 WIZO95785 1651 aa9.05□□□□□ -0.96
SSX9-202ENST00000608568 BAZ1BQ9UIG0 1483 aaKnown RBP9.02□□□□□ -0.96
SSX9-202ENST00000608568 CSRNP3Q8WYN3 585 aa9.01□□□□□ -0.97
SSX9-202ENST00000608568 ERCC6Q03468 1493 aa8.98□□□□□ -0.97
SSX9-202ENST00000608568 CUX2O14529 1486 aa8.97□□□□□ -0.97
SSX9-202ENST00000608568 PRDM2Q13029 1718 aa8.97□□□□□ -0.97
SSX9-202ENST00000608568 LAMC3Q9Y6N6 1575 aa8.96□□□□□ -0.97
SSX9-202ENST00000608568 SLC4A1APQ9BWU0 796 aaKnown RBP8.93□□□□□ -0.98
SSX9-202ENST00000608568 CACNB1Q02641 598 aaPredicted RBP8.92□□□□□ -0.98
SSX9-202ENST00000608568 DMRT2Q9Y5R5 561 aa8.89□□□□□ -0.99
SSX9-202ENST00000608568 TOP2AP11388 1531 aaKnown RBP8.85□□□□□ -0.99
SSX9-202ENST00000608568 WDR62O43379 1518 aa8.84□□□□□ -0.99
SSX9-202ENST00000608568 DNAJC5Q9H3Z4 198 aa8.83□□□□□ -1
SSX9-202ENST00000608568 RSF1Q96T23 1441 aaPredicted RBP8.81□□□□□ -1
SSX9-202ENST00000608568 PELP1Q8IZL8 1130 aaKnown RBP8.8□□□□□ -1
SSX9-202ENST00000608568 MRC2Q9UBG0 1479 aa8.8□□□□□ -1
SSX9-202ENST00000608568 MAPK8IP2Q13387 824 aaPredicted RBP8.79□□□□□ -1
SSX9-202ENST00000608568 PPP4R3CPQ6ZMV5 832 aa8.79□□□□□ -1
SSX9-202ENST00000608568 SCAF1Q9H7N4 1312 aaKnown RBP8.79□□□□□ -1
SSX9-202ENST00000608568 CADPSQ9ULU8 1353 aa8.78□□□□□ -1
SSX9-202ENST00000608568 PDS5BQ9NTI5 1447 aa8.78□□□□□ -1
SSX9-202ENST00000608568 CEP164Q9UPV0 1460 aa8.77□□□□□ -1.01
SSX9-202ENST00000608568 FANCD2Q9BXW9 1451 aa8.76□□□□□ -1.01
SSX9-202ENST00000608568 URB2Q14146 1524 aaKnown RBP8.75□□□□□ -1.01
SSX9-202ENST00000608568 NCBP3Q53F19 620 aaKnown RBP8.75□□□□□ -1.01
SSX9-202ENST00000608568 CFTRP13569 1480 aa8.75□□□□□ -1.01
SSX9-202ENST00000608568 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
SSX9-202ENST00000608568 MYT1Q01538 1121 aa8.69□□□□□ -1.02
SSX9-202ENST00000608568 CHD1O14646 1710 aa8.68□□□□□ -1.02
SSX9-202ENST00000608568 EIF4G3O43432 1585 aaKnown RBP8.66□□□□□ -1.02
SSX9-202ENST00000608568 TARBP1Q13395 1621 aaKnown RBP8.64□□□□□ -1.03
SSX9-202ENST00000608568 DNMBPQ6XZF7 1577 aa8.64□□□□□ -1.03
SSX9-202ENST00000608568 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
SSX9-202ENST00000608568 ZNF608Q9ULD9 1512 aaPredicted RBP8.64□□□□□ -1.03
SSX9-202ENST00000608568 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
SSX9-202ENST00000608568 WDR97A6NE52 1622 aa8.62□□□□□ -1.03
SSX9-202ENST00000608568 RIMBP3CA6NJZ7 1639 aa8.6□□□□□ -1.03
SSX9-202ENST00000608568 RIMBP3BA6NNM3 1639 aa8.6□□□□□ -1.03
SSX9-202ENST00000608568 RIMBP3Q9UFD9 1639 aa8.6□□□□□ -1.03
SSX9-202ENST00000608568 NPM3O75607 178 aaKnown RBP8.59□□□□□ -1.03
SSX9-202ENST00000608568 PBRM1Q86U86 1689 aa8.58□□□□□ -1.04
SSX9-202ENST00000608568 DCAF8L1A6NGE4 600 aa8.56□□□□□ -1.04
SSX9-202ENST00000608568 IFT140Q96RY7 1462 aa8.56□□□□□ -1.04
SSX9-202ENST00000608568 POLA1P09884 1462 aaPredicted RBP8.55□□□□□ -1.04
SSX9-202ENST00000608568 CUX1P39880 1505 aa8.54□□□□□ -1.04
SSX9-202ENST00000608568 RNF39Q9H2S5 420 aa8.54□□□□□ -1.04
SSX9-202ENST00000608568 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
SSX9-202ENST00000608568 ZBTB22O15209 634 aa8.51□□□□□ -1.05
SSX9-202ENST00000608568 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
SSX9-202ENST00000608568 ARHGEF11O15085 1522 aa8.49□□□□□ -1.05
SSX9-202ENST00000608568 ABCA5Q8WWZ7 1642 aa8.49□□□□□ -1.05
SSX9-202ENST00000608568 AQRO60306 1485 aaKnown RBP eCLIP8.49□□□□□ -1.05
SSX9-202ENST00000608568 ABCC8Q09428 1581 aa8.48□□□□□ -1.05
SSX9-202ENST00000608568 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
SSX9-202ENST00000608568 BIVM-ERCC5R4GMW8 1640 aa8.47□□□□□ -1.05
SSX9-202ENST00000608568 CLASP1Q7Z460 1538 aa8.46□□□□□ -1.05
SSX9-202ENST00000608568 AMER1Q5JTC6 1135 aaPredicted RBP8.46□□□□□ -1.06
SSX9-202ENST00000608568 SNAPC4Q5SXM2 1469 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms