RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 EHBP1L1Q8N3D4 1523 aa25.22■■□□□ 1.63
HDDC2-203ENST00000608284 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
HDDC2-203ENST00000608284 TNRQ92752 1358 aa25.22■■□□□ 1.63
HDDC2-203ENST00000608284 TOM1O60784 492 aa25.21■■□□□ 1.63
HDDC2-203ENST00000608284 ANKLE2Q86XL3 938 aa25.21■■□□□ 1.63
HDDC2-203ENST00000608284 THEMISQ8N1K5 641 aaPredicted RBP25.21■■□□□ 1.63
HDDC2-203ENST00000608284 ZNF142P52746 1687 aaPredicted RBP25.2■■□□□ 1.63
HDDC2-203ENST00000608284 FBXO31Q5XUX0 539 aaPredicted RBP25.2■■□□□ 1.62
HDDC2-203ENST00000608284 TIAM1Q13009 1591 aa25.19■■□□□ 1.62
HDDC2-203ENST00000608284 PIP4K2BP78356 416 aa25.17■■□□□ 1.62
HDDC2-203ENST00000608284 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
HDDC2-203ENST00000608284 DNMT1P26358 1616 aaKnown RBP25.12■■□□□ 1.61
HDDC2-203ENST00000608284 PZPP20742 1482 aa25.11■■□□□ 1.61
HDDC2-203ENST00000608284 FAM135AQ9P2D6 1515 aa25.11■■□□□ 1.61
HDDC2-203ENST00000608284 NCOA2Q15596 1464 aa25.1■■□□□ 1.61
HDDC2-203ENST00000608284 KDM5DQ9BY66 1539 aa25.1■■□□□ 1.61
HDDC2-203ENST00000608284 MIA2Q96PC5 1412 aa25.1■■□□□ 1.61
HDDC2-203ENST00000608284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.09■■□□□ 1.612e-9■□□□□ 11.3
HDDC2-203ENST00000608284 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
HDDC2-203ENST00000608284 CPS1P31327 1500 aa25.08■■□□□ 1.61
HDDC2-203ENST00000608284 HSPA1LP34931 641 aa25.08■■□□□ 1.61
HDDC2-203ENST00000608284 SHANK2Q9UPX8 1470 aa25.08■■□□□ 1.6
HDDC2-203ENST00000608284 NLRP1Q9C000 1473 aa25.06■■□□□ 1.6
HDDC2-203ENST00000608284 NPHP4O75161 1426 aaPredicted RBP25.01■■□□□ 1.59
HDDC2-203ENST00000608284 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
HDDC2-203ENST00000608284 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
HDDC2-203ENST00000608284 POLR1AO95602 1720 aaPredicted RBP24.97■■□□□ 1.59
HDDC2-203ENST00000608284 ARHGEF5Q12774 1597 aa24.97■■□□□ 1.59
HDDC2-203ENST00000608284 NEURL4Q96JN8 1562 aa24.95■■□□□ 1.58
HDDC2-203ENST00000608284 MED14O60244 1454 aa24.95■■□□□ 1.58
HDDC2-203ENST00000608284 LRRC9Q6ZRR7 1453 aa24.9■■□□□ 1.58
HDDC2-203ENST00000608284 DEPDC5O75140 1603 aa24.89■■□□□ 1.57
HDDC2-203ENST00000608284 EID1Q9Y6B2 187 aa24.88■■□□□ 1.57
HDDC2-203ENST00000608284 VWDEQ8N2E2 1590 aa24.88■■□□□ 1.57
HDDC2-203ENST00000608284 VPS8Q8N3P4 1428 aa24.87■■□□□ 1.57
HDDC2-203ENST00000608284 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
HDDC2-203ENST00000608284 ABCC3O15438 1527 aa24.86■■□□□ 1.57
HDDC2-203ENST00000608284 APLP2Q06481 763 aa24.86■■□□□ 1.57
HDDC2-203ENST00000608284 TXNDC2Q86VQ3 553 aa24.86■■□□□ 1.57
HDDC2-203ENST00000608284 MYOM3Q5VTT5 1437 aa24.86■■□□□ 1.57
HDDC2-203ENST00000608284 STAG3Q9UJ98 1225 aa24.85■■□□□ 1.57
HDDC2-203ENST00000608284 MED1Q15648 1581 aaPredicted RBP24.84■■□□□ 1.57
HDDC2-203ENST00000608284 ERVK-7P63135 1459 aa24.84■■□□□ 1.57
HDDC2-203ENST00000608284 KANK4Q5T7N3 995 aaPredicted RBP24.83■■□□□ 1.57
HDDC2-203ENST00000608284 MAST1Q9Y2H9 1570 aa24.83■■□□□ 1.57
HDDC2-203ENST00000608284 RNF17Q9BXT8 1623 aaKnown RBP24.83■■□□□ 1.56
HDDC2-203ENST00000608284 IQGAP1P46940 1657 aa24.82■■□□□ 1.56
HDDC2-203ENST00000608284 ZC3H13Q5T200 1668 aaKnown RBP24.82■■□□□ 1.56
HDDC2-203ENST00000608284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.82■■□□□ 1.569e-7■■■■□ 22.1
HDDC2-203ENST00000608284 LOC105371045A0A1W2PR82 267 aa24.81■■□□□ 1.56
HDDC2-203ENST00000608284 RRP7BPQ9NSQ0 103 aa24.8■■□□□ 1.56
HDDC2-203ENST00000608284 DUOX2Q9NRD8 1548 aa24.8■■□□□ 1.56
HDDC2-203ENST00000608284 EIF2AK4Q9P2K8 1649 aaKnown RBP24.79■■□□□ 1.56
HDDC2-203ENST00000608284 LRRC7Q96NW7 1537 aa24.79■■□□□ 1.56
HDDC2-203ENST00000608284 KANK1Q14678 1352 aa24.79■■□□□ 1.56
HDDC2-203ENST00000608284 SCAF11Q99590 1463 aaKnown RBP24.78■■□□□ 1.56
HDDC2-203ENST00000608284 KIF15Q9NS87 1388 aa24.77■■□□□ 1.56
HDDC2-203ENST00000608284 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
HDDC2-203ENST00000608284 LTKP29376 864 aa24.76■■□□□ 1.55
HDDC2-203ENST00000608284 ARHGAP31Q2M1Z3 1444 aa24.73■■□□□ 1.55
HDDC2-203ENST00000608284 ERBINQ96RT1 1412 aa24.71■■□□□ 1.55
HDDC2-203ENST00000608284 SYNMO15061 1565 aa24.71■■□□□ 1.55
HDDC2-203ENST00000608284 BCANQ96GW7 911 aa24.68■■□□□ 1.54
HDDC2-203ENST00000608284 SLIT1O75093 1534 aa24.67■■□□□ 1.54
HDDC2-203ENST00000608284 CFAP65Q6ZU64 1925 aaKnown RBP24.67■■□□□ 1.54
HDDC2-203ENST00000608284 ARHGAP23Q9P227 1491 aa24.67■■□□□ 1.54
HDDC2-203ENST00000608284 MROH1Q8NDA8 1641 aa24.67■■□□□ 1.54
HDDC2-203ENST00000608284 ABCC5O15440 1437 aa24.67■■□□□ 1.54
HDDC2-203ENST00000608284 TMEM2Q9UHN6 1383 aa24.67■■□□□ 1.54
HDDC2-203ENST00000608284 UBR1Q8IWV7 1749 aa24.66■■□□□ 1.54
HDDC2-203ENST00000608284 ALKQ9UM73 1620 aa24.66■■□□□ 1.54
HDDC2-203ENST00000608284 CEP152O94986 1710 aa24.66■■□□□ 1.54
HDDC2-203ENST00000608284 ANKRD30AQ9BXX3 1397 aa24.66■■□□□ 1.54
HDDC2-203ENST00000608284 CHIC2Q9UKJ5 165 aa24.65■■□□□ 1.54
HDDC2-203ENST00000608284 KCNA6P17658 529 aa24.64■■□□□ 1.54
HDDC2-203ENST00000608284 IDI1Q13907 227 aa24.64■■□□□ 1.54
HDDC2-203ENST00000608284 PROSER2Q86WR7 435 aaPredicted RBP24.64■■□□□ 1.54
HDDC2-203ENST00000608284 STRCP1A6NGW2 1772 aa24.62■■□□□ 1.53
HDDC2-203ENST00000608284 PRDM15P57071 1507 aaPredicted RBP24.62■■□□□ 1.53
HDDC2-203ENST00000608284 DAPK1P53355 1430 aa24.61■■□□□ 1.53
HDDC2-203ENST00000608284 HDGFP51858 240 aaKnown RBP24.6■■□□□ 1.53
HDDC2-203ENST00000608284 SLC26A8Q96RN1 970 aa24.59■■□□□ 1.53
HDDC2-203ENST00000608284 SLC52A1Q9NWF4 448 aa24.59■■□□□ 1.53
HDDC2-203ENST00000608284 FAM135BQ49AJ0 1406 aa24.59■■□□□ 1.53
HDDC2-203ENST00000608284 TMEM94Q12767 1356 aa24.58■■□□□ 1.53
HDDC2-203ENST00000608284 PTPN23Q9H3S7 1636 aa24.57■■□□□ 1.52
HDDC2-203ENST00000608284 EFCAB6Q5THR3 1501 aa24.56■■□□□ 1.52
HDDC2-203ENST00000608284 FGD6Q6ZV73 1430 aa24.54■■□□□ 1.52
HDDC2-203ENST00000608284 PIK3C2BO00750 1634 aa24.53■■□□□ 1.52
HDDC2-203ENST00000608284 PPP1R15AO75807 674 aaPredicted RBP24.52■■□□□ 1.52
HDDC2-203ENST00000608284 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
HDDC2-203ENST00000608284 RGS17Q9UGC6 210 aaPredicted RBP24.51■■□□□ 1.51
HDDC2-203ENST00000608284 LMTK2Q8IWU2 1503 aa24.51■■□□□ 1.51
HDDC2-203ENST00000608284 RBM33Q96EV2 1170 aaKnown RBP24.5■■□□□ 1.51
HDDC2-203ENST00000608284 MSH6P52701 1360 aa24.5■■□□□ 1.51
HDDC2-203ENST00000608284 CROCC2H7BZ55 1655 aa24.49■■□□□ 1.51
HDDC2-203ENST00000608284 SLAIN2Q9P270 581 aa24.47■■□□□ 1.51
HDDC2-203ENST00000608284 NOS1P29475 1434 aa24.46■■□□□ 1.51
HDDC2-203ENST00000608284 KDM5AP29375 1690 aaKnown RBP24.46■■□□□ 1.51
HDDC2-203ENST00000608284 C14orf37Q86TY3 774 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms