RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 TSPY10P0CW01 314 aa28.32■■■□□ 2.12
CCDC12-212ENST00000605358 KDM5DQ9BY66 1539 aa28.3■■■□□ 2.12
CCDC12-212ENST00000605358 PZPP20742 1482 aa28.29■■■□□ 2.12
CCDC12-212ENST00000605358 DNMT1P26358 1616 aaKnown RBP28.29■■■□□ 2.12
CCDC12-212ENST00000605358 ZNF335Q9H4Z2 1342 aaPredicted RBP28.28■■■□□ 2.12
CCDC12-212ENST00000605358 WASHC2CQ9Y4E1 1318 aa28.28■■■□□ 2.12
CCDC12-212ENST00000605358 TNRQ92752 1358 aa28.26■■■□□ 2.12
CCDC12-212ENST00000605358 DISP3Q9P2K9 1392 aa28.26■■■□□ 2.12
CCDC12-212ENST00000605358 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.11
CCDC12-212ENST00000605358 LRRC9Q6ZRR7 1453 aa28.25■■■□□ 2.11
CCDC12-212ENST00000605358 MAP3K1Q13233 1512 aa28.23■■■□□ 2.11
CCDC12-212ENST00000605358 FBXO31Q5XUX0 539 aaPredicted RBP28.21■■■□□ 2.11
CCDC12-212ENST00000605358 THEMISQ8N1K5 641 aaPredicted RBP28.2■■■□□ 2.1
CCDC12-212ENST00000605358 NLRP1Q9C000 1473 aa28.2■■■□□ 2.1
CCDC12-212ENST00000605358 MIA2Q96PC5 1412 aa28.19■■■□□ 2.1
CCDC12-212ENST00000605358 MAST1Q9Y2H9 1570 aa28.19■■■□□ 2.1
CCDC12-212ENST00000605358 UBAP1LF5GYI3 381 aa28.17■■■□□ 2.1
CCDC12-212ENST00000605358 POLR1AO95602 1720 aaPredicted RBP28.17■■■□□ 2.1
CCDC12-212ENST00000605358 ANKLE2Q86XL3 938 aa28.16■■■□□ 2.1
CCDC12-212ENST00000605358 RNF17Q9BXT8 1623 aaKnown RBP28.14■■■□□ 2.1
CCDC12-212ENST00000605358 CPS1P31327 1500 aa28.13■■■□□ 2.09
CCDC12-212ENST00000605358 SPATA31D1Q6ZQQ2 1576 aa28.12■■■□□ 2.09
CCDC12-212ENST00000605358 EIF2AK4Q9P2K8 1649 aaKnown RBP28.12■■■□□ 2.09
CCDC12-212ENST00000605358 ZC3H13Q5T200 1668 aaKnown RBP28.12■■■□□ 2.09
CCDC12-212ENST00000605358 NEURL4Q96JN8 1562 aa28.11■■■□□ 2.09
CCDC12-212ENST00000605358 MYOM3Q5VTT5 1437 aa28.1■■■□□ 2.09
CCDC12-212ENST00000605358 UGGT1Q9NYU2 1555 aa28.1■■■□□ 2.09
CCDC12-212ENST00000605358 MED14O60244 1454 aa28.09■■■□□ 2.09
CCDC12-212ENST00000605358 ILDR2Q71H61 639 aa28.09■■■□□ 2.09
CCDC12-212ENST00000605358 DEPDC5O75140 1603 aa28.08■■■□□ 2.09
CCDC12-212ENST00000605358 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
CCDC12-212ENST00000605358 SOCS7O14512 581 aa28.08■■■□□ 2.09
CCDC12-212ENST00000605358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.08■■■□□ 2.09
CCDC12-212ENST00000605358 SHANK2Q9UPX8 1470 aa28.08■■■□□ 2.09
CCDC12-212ENST00000605358 ABCC3O15438 1527 aa28.07■■■□□ 2.08
CCDC12-212ENST00000605358 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
CCDC12-212ENST00000605358 TOM1O60784 492 aa28.04■■■□□ 2.08
CCDC12-212ENST00000605358 DUOX2Q9NRD8 1548 aa28.02■■■□□ 2.08
CCDC12-212ENST00000605358 NPHP4O75161 1426 aaPredicted RBP28.02■■■□□ 2.08
CCDC12-212ENST00000605358 ERVK-7P63135 1459 aa27.99■■■□□ 2.07
CCDC12-212ENST00000605358 VWDEQ8N2E2 1590 aa27.98■■■□□ 2.07
CCDC12-212ENST00000605358 MROH1Q8NDA8 1641 aa27.97■■■□□ 2.07
CCDC12-212ENST00000605358 APLP2Q06481 763 aa27.96■■■□□ 2.07
CCDC12-212ENST00000605358 IQGAP1P46940 1657 aa27.95■■■□□ 2.07
CCDC12-212ENST00000605358 ARHGAP31Q2M1Z3 1444 aa27.94■■■□□ 2.06
CCDC12-212ENST00000605358 ERBINQ96RT1 1412 aa27.94■■■□□ 2.06
CCDC12-212ENST00000605358 KIF15Q9NS87 1388 aa27.92■■■□□ 2.06
CCDC12-212ENST00000605358 CEP152O94986 1710 aa27.9■■■□□ 2.06
CCDC12-212ENST00000605358 PRDM15P57071 1507 aaPredicted RBP27.9■■■□□ 2.06
CCDC12-212ENST00000605358 ABCC5O15440 1437 aa27.9■■■□□ 2.06
CCDC12-212ENST00000605358 CROCC2H7BZ55 1655 aa27.88■■■□□ 2.05
CCDC12-212ENST00000605358 PIP4K2BP78356 416 aa27.88■■■□□ 2.05
CCDC12-212ENST00000605358 PTPN23Q9H3S7 1636 aa27.88■■■□□ 2.05
CCDC12-212ENST00000605358 UBR1Q8IWV7 1749 aa27.87■■■□□ 2.05
CCDC12-212ENST00000605358 CFAP65Q6ZU64 1925 aaKnown RBP27.87■■■□□ 2.05
CCDC12-212ENST00000605358 SCAF1Q9H7N4 1312 aaKnown RBP27.87■■■□□ 2.05
CCDC12-212ENST00000605358 HSPA1LP34931 641 aa27.86■■■□□ 2.05
CCDC12-212ENST00000605358 RRP7BPQ9NSQ0 103 aa27.85■■■□□ 2.05
CCDC12-212ENST00000605358 KANK1Q14678 1352 aa27.84■■■□□ 2.05
CCDC12-212ENST00000605358 DAPK1P53355 1430 aa27.84■■■□□ 2.05
CCDC12-212ENST00000605358 SCAF11Q99590 1463 aaKnown RBP27.83■■■□□ 2.05
CCDC12-212ENST00000605358 ARHGAP23Q9P227 1491 aa27.83■■■□□ 2.05
CCDC12-212ENST00000605358 SLIT1O75093 1534 aa27.83■■■□□ 2.05
CCDC12-212ENST00000605358 SYNMO15061 1565 aa27.82■■■□□ 2.04
CCDC12-212ENST00000605358 FGD6Q6ZV73 1430 aa27.82■■■□□ 2.04
CCDC12-212ENST00000605358 LRRC7Q96NW7 1537 aa27.81■■■□□ 2.04
CCDC12-212ENST00000605358 EID1Q9Y6B2 187 aa27.8■■■□□ 2.04
CCDC12-212ENST00000605358 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
CCDC12-212ENST00000605358 TXNDC2Q86VQ3 553 aa27.79■■■□□ 2.04
CCDC12-212ENST00000605358 STRCP1A6NGW2 1772 aa27.78■■■□□ 2.04
CCDC12-212ENST00000605358 LMTK2Q8IWU2 1503 aa27.77■■■□□ 2.04
CCDC12-212ENST00000605358 KDM5AP29375 1690 aaKnown RBP27.76■■■□□ 2.03
CCDC12-212ENST00000605358 LTKP29376 864 aa27.76■■■□□ 2.03
CCDC12-212ENST00000605358 ALKQ9UM73 1620 aa27.76■■■□□ 2.03
CCDC12-212ENST00000605358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.75■■■□□ 2.031e-6■■■□□ 15.5
CCDC12-212ENST00000605358 TMEM2Q9UHN6 1383 aa27.73■■■□□ 2.03
CCDC12-212ENST00000605358 MED1Q15648 1581 aaPredicted RBP27.72■■■□□ 2.03
CCDC12-212ENST00000605358 STAG3Q9UJ98 1225 aa27.71■■■□□ 2.03
CCDC12-212ENST00000605358 PIK3C2BO00750 1634 aa27.7■■■□□ 2.02
CCDC12-212ENST00000605358 CHIC2Q9UKJ5 165 aa27.67■■■□□ 2.02
CCDC12-212ENST00000605358 ADGRL2O95490 1459 aa27.67■■■□□ 2.02
CCDC12-212ENST00000605358 EFCAB6Q5THR3 1501 aa27.67■■■□□ 2.02
CCDC12-212ENST00000605358 IDI1Q13907 227 aa27.66■■■□□ 2.02
CCDC12-212ENST00000605358 SLC52A1Q9NWF4 448 aa27.65■■■□□ 2.02
CCDC12-212ENST00000605358 NOS1P29475 1434 aa27.64■■■□□ 2.02
CCDC12-212ENST00000605358 RPRD2Q5VT52 1461 aaKnown RBP27.61■■■□□ 2.01
CCDC12-212ENST00000605358 KCNA6P17658 529 aa27.59■■■□□ 2.01
CCDC12-212ENST00000605358 XIRP1Q702N8 1843 aaKnown RBP27.57■■■□□ 2
CCDC12-212ENST00000605358 TET3O43151 1660 aa27.57■■■□□ 2
CCDC12-212ENST00000605358 PHF23Q9BUL5 403 aaPredicted RBP27.57■■■□□ 2
CCDC12-212ENST00000605358 ANKRD50Q9ULJ7 1429 aa27.56■■■□□ 2
CCDC12-212ENST00000605358 FAM135BQ49AJ0 1406 aa27.55■■■□□ 2
CCDC12-212ENST00000605358 ADGRB3O60242 1522 aa27.55■■■□□ 2
CCDC12-212ENST00000605358 HDGFP51858 240 aaKnown RBP27.53■■■□□ 2
CCDC12-212ENST00000605358 FAM50AQ14320 339 aaKnown RBP27.53■■■□□ 2
CCDC12-212ENST00000605358 TMEM94Q12767 1356 aa27.5■■□□□ 1.99
CCDC12-212ENST00000605358 PROSER2Q86WR7 435 aaPredicted RBP27.48■■□□□ 1.99
CCDC12-212ENST00000605358 SLC26A8Q96RN1 970 aa27.48■■□□□ 1.99
CCDC12-212ENST00000605358 NKTRP30414 1462 aaKnown RBP27.48■■□□□ 1.99
CCDC12-212ENST00000605358 NWD1Q149M9 1564 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms