RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 NISCHQ9Y2I1 1504 aa44.73■■■■■ 4.75
CCDC12-212ENST00000605358 CCDC180Q9P1Z9 1646 aa40.24■■■■■ 4.03
CCDC12-212ENST00000605358 ABCC9O60706 1549 aa40.19■■■■■ 4.02
CCDC12-212ENST00000605358 RB1CC1Q8TDY2 1594 aa38.35■■■■□ 3.73
CCDC12-212ENST00000605358 NACADO15069 1562 aa38.1■■■■□ 3.69
CCDC12-212ENST00000605358 DNAJC5BQ9UF47 199 aa37.8■■■■□ 3.64
CCDC12-212ENST00000605358 DCAF8L2P0C7V8 631 aa37.7■■■■□ 3.63
CCDC12-212ENST00000605358 MYO15BQ96JP2 1530 aa37.62■■■■□ 3.61
CCDC12-212ENST00000605358 PABPN1Q86U42 306 aaKnown RBP eCLIP37.39■■■■□ 3.58
CCDC12-212ENST00000605358 UNC13AQ9UPW8 1703 aa37.37■■■■□ 3.57
CCDC12-212ENST00000605358 BICRAQ9NZM4 1560 aa37.16■■■■□ 3.54
CCDC12-212ENST00000605358 DCAF1Q9Y4B6 1507 aa37.05■■■■□ 3.52
CCDC12-212ENST00000605358 ZCCHC6Q5VYS8 1495 aaKnown RBP37.03■■■■□ 3.52
CCDC12-212ENST00000605358 SHROOM4Q9ULL8 1493 aa36.85■■■■□ 3.49
CCDC12-212ENST00000605358 SCRIBQ14160 1630 aa36.49■■■■□ 3.43
CCDC12-212ENST00000605358 CC2D2AQ9P2K1 1620 aa36.36■■■■□ 3.41
CCDC12-212ENST00000605358 CECR2Q9BXF3 1484 aa36.29■■■■□ 3.4
CCDC12-212ENST00000605358 EIF4G1Q04637 1599 aaKnown RBP36.27■■■■□ 3.4
CCDC12-212ENST00000605358 NCAPD3P42695 1498 aa35.16■■■■□ 3.22
CCDC12-212ENST00000605358 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
CCDC12-212ENST00000605358 SMARCA2P51531 1590 aa34.93■■■■□ 3.18
CCDC12-212ENST00000605358 DNAJC5Q9H3Z4 198 aa34.93■■■■□ 3.18
CCDC12-212ENST00000605358 SMARCA4P51532 1647 aa34.89■■■■□ 3.18
CCDC12-212ENST00000605358 HMGXB3Q12766 1538 aa34.88■■■■□ 3.17
CCDC12-212ENST00000605358 CUX2O14529 1486 aa34.85■■■■□ 3.17
CCDC12-212ENST00000605358 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
CCDC12-212ENST00000605358 BAZ1AQ9NRL2 1556 aaPredicted RBP34.76■■■■□ 3.16
CCDC12-212ENST00000605358 PEG3Q9GZU2 1588 aa34.64■■■■□ 3.14
CCDC12-212ENST00000605358 BAZ1BQ9UIG0 1483 aaKnown RBP34.63■■■■□ 3.13
CCDC12-212ENST00000605358 NESP48681 1621 aa34.48■■■■□ 3.11
CCDC12-212ENST00000605358 MROH2BQ7Z745 1585 aa34.39■■■■□ 3.1
CCDC12-212ENST00000605358 LAMC3Q9Y6N6 1575 aa34.38■■■■□ 3.09
CCDC12-212ENST00000605358 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
CCDC12-212ENST00000605358 PDS5BQ9NTI5 1447 aa34.21■■■■□ 3.07
CCDC12-212ENST00000605358 CADPSQ9ULU8 1353 aa34.07■■■■□ 3.04
CCDC12-212ENST00000605358 KIF21AQ7Z4S6 1674 aa34.06■■■■□ 3.04
CCDC12-212ENST00000605358 WIZO95785 1651 aa33.95■■■■□ 3.03
CCDC12-212ENST00000605358 MRC2Q9UBG0 1479 aa33.85■■■■□ 3.01
CCDC12-212ENST00000605358 WDR62O43379 1518 aa33.77■■■■□ 3
CCDC12-212ENST00000605358 RSF1Q96T23 1441 aaPredicted RBP33.69■■■□□ 2.98
CCDC12-212ENST00000605358 CEP164Q9UPV0 1460 aa33.69■■■□□ 2.98
CCDC12-212ENST00000605358 CFTRP13569 1480 aa33.65■■■□□ 2.98
CCDC12-212ENST00000605358 FANCD2Q9BXW9 1451 aa33.63■■■□□ 2.97
CCDC12-212ENST00000605358 TOP2AP11388 1531 aaKnown RBP33.59■■■□□ 2.97
CCDC12-212ENST00000605358 URB2Q14146 1524 aaKnown RBP33.32■■■□□ 2.92
CCDC12-212ENST00000605358 PRDM2Q13029 1718 aa33.29■■■□□ 2.92
CCDC12-212ENST00000605358 OSCARQ8IYS5 282 aa33.24■■■□□ 2.91
CCDC12-212ENST00000605358 TRIM41Q8WV44 630 aa33.2■■■□□ 2.91
CCDC12-212ENST00000605358 CCDC88BA6NC98 1476 aa33.19■■■□□ 2.9
CCDC12-212ENST00000605358 IFT140Q96RY7 1462 aa33.05■■■□□ 2.88
CCDC12-212ENST00000605358 ABCC8Q09428 1581 aa33.04■■■□□ 2.88
CCDC12-212ENST00000605358 TOPBP1Q92547 1522 aa32.97■■■□□ 2.87
CCDC12-212ENST00000605358 ZNF608Q9ULD9 1512 aaPredicted RBP32.89■■■□□ 2.86
CCDC12-212ENST00000605358 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
CCDC12-212ENST00000605358 EIF4G3O43432 1585 aaKnown RBP32.73■■■□□ 2.83
CCDC12-212ENST00000605358 RIMBP3CA6NJZ7 1639 aa32.7■■■□□ 2.83
CCDC12-212ENST00000605358 RIMBP3BA6NNM3 1639 aa32.7■■■□□ 2.83
CCDC12-212ENST00000605358 RIMBP3Q9UFD9 1639 aa32.7■■■□□ 2.83
CCDC12-212ENST00000605358 TARBP1Q13395 1621 aaKnown RBP32.69■■■□□ 2.82
CCDC12-212ENST00000605358 POLA1P09884 1462 aaPredicted RBP32.62■■■□□ 2.81
CCDC12-212ENST00000605358 AQRO60306 1485 aaKnown RBP eCLIP32.61■■■□□ 2.813e-7■■■■□ 20.8
CCDC12-212ENST00000605358 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
CCDC12-212ENST00000605358 SOGA1O94964 1423 aa32.51■■■□□ 2.79
CCDC12-212ENST00000605358 CHD1O14646 1710 aa32.5■■■□□ 2.79
CCDC12-212ENST00000605358 WDR97A6NE52 1622 aa32.49■■■□□ 2.79
CCDC12-212ENST00000605358 RAD54L2Q9Y4B4 1467 aa32.45■■■□□ 2.79
CCDC12-212ENST00000605358 FBLN2P98095 1184 aa32.41■■■□□ 2.78
CCDC12-212ENST00000605358 TDRD9Q8NDG6 1382 aaKnown RBP32.39■■■□□ 2.78
CCDC12-212ENST00000605358 FGD5Q6ZNL6 1462 aa32.38■■■□□ 2.77
CCDC12-212ENST00000605358 CYB5RLQ6IPT4 315 aa32.37■■■□□ 2.77
CCDC12-212ENST00000605358 CUX1P39880 1505 aa32.33■■■□□ 2.77
CCDC12-212ENST00000605358 MAGI1Q96QZ7 1491 aaPredicted RBP32.29■■■□□ 2.76
CCDC12-212ENST00000605358 SNAPC4Q5SXM2 1469 aa32.28■■■□□ 2.76
CCDC12-212ENST00000605358 GRIN2BQ13224 1484 aa32.26■■■□□ 2.75
CCDC12-212ENST00000605358 ARAP1Q96P48 1450 aa32.25■■■□□ 2.75
CCDC12-212ENST00000605358 CHMP7Q8WUX9 453 aaPredicted RBP32.24■■■□□ 2.75
CCDC12-212ENST00000605358 SYNJ1O43426 1573 aa32.19■■■□□ 2.74
CCDC12-212ENST00000605358 CLASP1Q7Z460 1538 aa32.18■■■□□ 2.74
CCDC12-212ENST00000605358 SYNJ2O15056 1496 aa32.16■■■□□ 2.74
CCDC12-212ENST00000605358 GAPVD1Q14C86 1478 aa32.1■■■□□ 2.73
CCDC12-212ENST00000605358 ABCA10Q8WWZ4 1543 aa32.08■■■□□ 2.73
CCDC12-212ENST00000605358 PBRM1Q86U86 1689 aa32.05■■■□□ 2.72
CCDC12-212ENST00000605358 TRHP20396 242 aaPredicted RBP32.04■■■□□ 2.72
CCDC12-212ENST00000605358 SUPT5HO00267 1087 aaKnown RBP32.01■■■□□ 2.71
CCDC12-212ENST00000605358 ABCA5Q8WWZ7 1642 aa32■■■□□ 2.71
CCDC12-212ENST00000605358 WRNQ14191 1432 aaPredicted RBP eCLIP31.95■■■□□ 2.71
CCDC12-212ENST00000605358 TOP2BQ02880 1626 aa31.84■■■□□ 2.69
CCDC12-212ENST00000605358 BIVM-ERCC5R4GMW8 1640 aa31.83■■■□□ 2.69
CCDC12-212ENST00000605358 GRIN2AQ12879 1464 aa31.81■■■□□ 2.68
CCDC12-212ENST00000605358 ADAMTS12P58397 1594 aa31.74■■■□□ 2.67
CCDC12-212ENST00000605358 NUP160Q12769 1436 aa31.74■■■□□ 2.67
CCDC12-212ENST00000605358 FHAD1B1AJZ9 1412 aa31.73■■■□□ 2.67
CCDC12-212ENST00000605358 ERICH3Q5RHP9 1530 aa31.7■■■□□ 2.67
CCDC12-212ENST00000605358 CEP170Q5SW79 1584 aa31.64■■■□□ 2.66
CCDC12-212ENST00000605358 SHROOM2Q13796 1616 aa31.6■■■□□ 2.65
CCDC12-212ENST00000605358 ERCC6L2Q5T890 1561 aa31.56■■■□□ 2.64
CCDC12-212ENST00000605358 JPH4Q96JJ6 628 aa31.43■■■□□ 2.62
CCDC12-212ENST00000605358 PRG4Q92954 1404 aaPredicted RBP31.41■■■□□ 2.62
CCDC12-212ENST00000605358 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
CCDC12-212ENST00000605358 KIF27Q86VH2 1401 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms