RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 FBXO41Q8TF61 875 aa25.53■■□□□ 1.68
TUBE1-206ENST00000603722 STRCQ7RTU9 1775 aa25.53■■□□□ 1.68
TUBE1-206ENST00000603722 NCOA1Q15788 1441 aa25.53■■□□□ 1.68
TUBE1-206ENST00000603722 TCOF1Q13428 1488 aaKnown RBP25.52■■□□□ 1.68
TUBE1-206ENST00000603722 SHANK2Q9UPX8 1470 aa25.52■■□□□ 1.68
TUBE1-206ENST00000603722 DAPK1P53355 1430 aa25.5■■□□□ 1.67
TUBE1-206ENST00000603722 CAMSAP1Q5T5Y3 1602 aa25.49■■□□□ 1.67
TUBE1-206ENST00000603722 PZPP20742 1482 aa25.49■■□□□ 1.67
TUBE1-206ENST00000603722 KIF15Q9NS87 1388 aa25.49■■□□□ 1.67
TUBE1-206ENST00000603722 CEP170BQ9Y4F5 1589 aaPredicted RBP25.48■■□□□ 1.67
TUBE1-206ENST00000603722 PTPRTO14522 1441 aa25.48■■□□□ 1.67
TUBE1-206ENST00000603722 FBXO31Q5XUX0 539 aaPredicted RBP25.48■■□□□ 1.67
TUBE1-206ENST00000603722 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
TUBE1-206ENST00000603722 RNF17Q9BXT8 1623 aaKnown RBP25.47■■□□□ 1.67
TUBE1-206ENST00000603722 TNRQ92752 1358 aa25.46■■□□□ 1.67
TUBE1-206ENST00000603722 EIF2AK4Q9P2K8 1649 aaKnown RBP25.46■■□□□ 1.67
TUBE1-206ENST00000603722 ZNF142P52746 1687 aaPredicted RBP25.45■■□□□ 1.67
TUBE1-206ENST00000603722 CERKQ8TCT0 537 aa25.45■■□□□ 1.66
TUBE1-206ENST00000603722 RRP7BPQ9NSQ0 103 aa25.45■■□□□ 1.66
TUBE1-206ENST00000603722 CROCC2H7BZ55 1655 aa25.45■■□□□ 1.66
TUBE1-206ENST00000603722 DNMT1P26358 1616 aaKnown RBP25.45■■□□□ 1.66
TUBE1-206ENST00000603722 ABCC3O15438 1527 aa25.44■■□□□ 1.66
TUBE1-206ENST00000603722 NCKAP5LQ9HCH0 1330 aa25.42■■□□□ 1.66
TUBE1-206ENST00000603722 A2ML1A8K2U0 1454 aa25.42■■□□□ 1.66
TUBE1-206ENST00000603722 MROH1Q8NDA8 1641 aa25.41■■□□□ 1.66
TUBE1-206ENST00000603722 PLA2R1Q13018 1463 aa25.41■■□□□ 1.66
TUBE1-206ENST00000603722 ERBINQ96RT1 1412 aa25.41■■□□□ 1.66
TUBE1-206ENST00000603722 CHIC2Q9UKJ5 165 aa25.4■■□□□ 1.66
TUBE1-206ENST00000603722 FAM50AQ14320 339 aaKnown RBP25.38■■□□□ 1.65
TUBE1-206ENST00000603722 ZC3H13Q5T200 1668 aaKnown RBP25.37■■□□□ 1.65
TUBE1-206ENST00000603722 ANKRD30AQ9BXX3 1397 aa25.37■■□□□ 1.65
TUBE1-206ENST00000603722 PKD2Q13563 968 aa25.36■■□□□ 1.65
TUBE1-206ENST00000603722 PRDM15P57071 1507 aaPredicted RBP25.34■■□□□ 1.65
TUBE1-206ENST00000603722 NLRP1Q9C000 1473 aa25.33■■□□□ 1.65
TUBE1-206ENST00000603722 ERVK-7P63135 1459 aa25.32■■□□□ 1.64
TUBE1-206ENST00000603722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.31■■□□□ 1.64
TUBE1-206ENST00000603722 SPATA31D1Q6ZQQ2 1576 aa25.31■■□□□ 1.64
TUBE1-206ENST00000603722 ADGRL2O95490 1459 aa25.29■■□□□ 1.64
TUBE1-206ENST00000603722 LTBP4Q8N2S1 1624 aa25.28■■□□□ 1.64
TUBE1-206ENST00000603722 CEP152O94986 1710 aa25.27■■□□□ 1.64
TUBE1-206ENST00000603722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
TUBE1-206ENST00000603722 UGGT1Q9NYU2 1555 aa25.27■■□□□ 1.64
TUBE1-206ENST00000603722 ZNF335Q9H4Z2 1342 aaPredicted RBP25.26■■□□□ 1.63
TUBE1-206ENST00000603722 KANK1Q14678 1352 aa25.26■■□□□ 1.63
TUBE1-206ENST00000603722 DEPDC5O75140 1603 aa25.26■■□□□ 1.63
TUBE1-206ENST00000603722 PPARGC1BQ86YN6 1023 aaKnown RBP25.25■■□□□ 1.63
TUBE1-206ENST00000603722 THEMISQ8N1K5 641 aaPredicted RBP25.25■■□□□ 1.63
TUBE1-206ENST00000603722 ARHGAP31Q2M1Z3 1444 aa25.24■■□□□ 1.63
TUBE1-206ENST00000603722 NEURL4Q96JN8 1562 aa25.21■■□□□ 1.63
TUBE1-206ENST00000603722 ANKLE2Q86XL3 938 aa25.2■■□□□ 1.62
TUBE1-206ENST00000603722 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
TUBE1-206ENST00000603722 LMTK2Q8IWU2 1503 aa25.19■■□□□ 1.62
TUBE1-206ENST00000603722 VWDEQ8N2E2 1590 aa25.18■■□□□ 1.62
TUBE1-206ENST00000603722 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
TUBE1-206ENST00000603722 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
TUBE1-206ENST00000603722 NPHP4O75161 1426 aaPredicted RBP25.14■■□□□ 1.62
TUBE1-206ENST00000603722 ITGAEP38570 1179 aa25.12■■□□□ 1.61
TUBE1-206ENST00000603722 MED14O60244 1454 aa25.12■■□□□ 1.61
TUBE1-206ENST00000603722 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
TUBE1-206ENST00000603722 ROCK1Q13464 1354 aa25.11■■□□□ 1.61
TUBE1-206ENST00000603722 UBR1Q8IWV7 1749 aa25.08■■□□□ 1.61
TUBE1-206ENST00000603722 NOS1P29475 1434 aa25.05■■□□□ 1.6
TUBE1-206ENST00000603722 SCAF11Q99590 1463 aaKnown RBP25.04■■□□□ 1.6
TUBE1-206ENST00000603722 ARHGAP23Q9P227 1491 aa25.04■■□□□ 1.6
TUBE1-206ENST00000603722 STAG3Q9UJ98 1225 aa25.04■■□□□ 1.6
TUBE1-206ENST00000603722 SYNMO15061 1565 aa25.04■■□□□ 1.6
TUBE1-206ENST00000603722 PIK3C2BO00750 1634 aa25.04■■□□□ 1.6
TUBE1-206ENST00000603722 SLIT1O75093 1534 aa25.03■■□□□ 1.6
TUBE1-206ENST00000603722 IQGAP1P46940 1657 aa25.03■■□□□ 1.6
TUBE1-206ENST00000603722 CPS1P31327 1500 aa25.02■■□□□ 1.6
TUBE1-206ENST00000603722 UNC13BO14795 1591 aa25.02■■□□□ 1.6
TUBE1-206ENST00000603722 IDI1Q13907 227 aa25.02■■□□□ 1.6
TUBE1-206ENST00000603722 UBAP1LF5GYI3 381 aa25.01■■□□□ 1.59
TUBE1-206ENST00000603722 LTKP29376 864 aa25.01■■□□□ 1.59
TUBE1-206ENST00000603722 TXNDC2Q86VQ3 553 aa25.01■■□□□ 1.59
TUBE1-206ENST00000603722 RPRD2Q5VT52 1461 aaKnown RBP25.01■■□□□ 1.59
TUBE1-206ENST00000603722 TMEM2Q9UHN6 1383 aa25■■□□□ 1.59
TUBE1-206ENST00000603722 RRBP1Q9P2E9 1410 aaKnown RBP24.99■■□□□ 1.59
TUBE1-206ENST00000603722 CFAP65Q6ZU64 1925 aaKnown RBP24.98■■□□□ 1.59
TUBE1-206ENST00000603722 EID1Q9Y6B2 187 aa24.98■■□□□ 1.59
TUBE1-206ENST00000603722 TET3O43151 1660 aa24.97■■□□□ 1.59
TUBE1-206ENST00000603722 SLC52A1Q9NWF4 448 aa24.96■■□□□ 1.59
TUBE1-206ENST00000603722 ADGRB3O60242 1522 aa24.96■■□□□ 1.59
TUBE1-206ENST00000603722 NUP155O75694 1391 aa24.93■■□□□ 1.58
TUBE1-206ENST00000603722 KDM5AP29375 1690 aaKnown RBP24.91■■□□□ 1.58
TUBE1-206ENST00000603722 IQGAP3Q86VI3 1631 aa24.9■■□□□ 1.58
TUBE1-206ENST00000603722 GCC2Q8IWJ2 1684 aa24.89■■□□□ 1.58
TUBE1-206ENST00000603722 LRRC7Q96NW7 1537 aa24.86■■□□□ 1.57
TUBE1-206ENST00000603722 E9PCH4 1651 aa24.85■■□□□ 1.57
TUBE1-206ENST00000603722 SCAF1Q9H7N4 1312 aaKnown RBP24.85■■□□□ 1.57
TUBE1-206ENST00000603722 TOM1O60784 492 aa24.84■■□□□ 1.57
TUBE1-206ENST00000603722 PIP4K2BP78356 416 aa24.84■■□□□ 1.57
TUBE1-206ENST00000603722 STRCP1A6NGW2 1772 aa24.82■■□□□ 1.56
TUBE1-206ENST00000603722 CHGAP10645 457 aaKnown RBP24.82■■□□□ 1.56
TUBE1-206ENST00000603722 NAIPQ13075 1403 aa24.82■■□□□ 1.56
TUBE1-206ENST00000603722 ZFYVE9O95405 1425 aa24.81■■□□□ 1.56
TUBE1-206ENST00000603722 SLC26A8Q96RN1 970 aa24.81■■□□□ 1.56
TUBE1-206ENST00000603722 RIMS2Q9UQ26 1411 aa24.8■■□□□ 1.56
TUBE1-206ENST00000603722 TMEM131LA2VDJ0 1609 aa24.79■■□□□ 1.56
TUBE1-206ENST00000603722 BCANQ96GW7 911 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms