RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 NISCHQ9Y2I1 1504 aa40.5■■■■■ 4.07
TUBE1-206ENST00000603722 CCDC180Q9P1Z9 1646 aa36.12■■■■□ 3.37
TUBE1-206ENST00000603722 ABCC9O60706 1549 aa35.89■■■■□ 3.34
TUBE1-206ENST00000603722 RB1CC1Q8TDY2 1594 aa34.26■■■■□ 3.07
TUBE1-206ENST00000603722 NACADO15069 1562 aa34.11■■■■□ 3.05
TUBE1-206ENST00000603722 DCAF8L2P0C7V8 631 aa34.07■■■■□ 3.04
TUBE1-206ENST00000603722 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
TUBE1-206ENST00000603722 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
TUBE1-206ENST00000603722 PABPN1Q86U42 306 aaKnown RBP eCLIP33.49■■■□□ 2.95
TUBE1-206ENST00000603722 DCAF1Q9Y4B6 1507 aa33.45■■■□□ 2.95
TUBE1-206ENST00000603722 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
TUBE1-206ENST00000603722 DNAJC5BQ9UF47 199 aa33.33■■■□□ 2.93
TUBE1-206ENST00000603722 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
TUBE1-206ENST00000603722 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
TUBE1-206ENST00000603722 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
TUBE1-206ENST00000603722 EIF4G1Q04637 1599 aaKnown RBP32.42■■■□□ 2.78
TUBE1-206ENST00000603722 CC2D2AQ9P2K1 1620 aa32.38■■■□□ 2.77
TUBE1-206ENST00000603722 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
TUBE1-206ENST00000603722 NCAPD3P42695 1498 aa31.5■■■□□ 2.63
TUBE1-206ENST00000603722 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
TUBE1-206ENST00000603722 ATAD2BQ9ULI0 1458 aa31.48■■■□□ 2.63
TUBE1-206ENST00000603722 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
TUBE1-206ENST00000603722 SMARCA2P51531 1590 aa31.39■■■□□ 2.61
TUBE1-206ENST00000603722 HMGXB3Q12766 1538 aa31.29■■■□□ 2.6
TUBE1-206ENST00000603722 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
TUBE1-206ENST00000603722 BAZ1BQ9UIG0 1483 aaKnown RBP31.2■■■□□ 2.58
TUBE1-206ENST00000603722 PEG3Q9GZU2 1588 aa31.17■■■□□ 2.58
TUBE1-206ENST00000603722 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
TUBE1-206ENST00000603722 NESP48681 1621 aa30.92■■■□□ 2.54
TUBE1-206ENST00000603722 WIZO95785 1651 aa30.82■■■□□ 2.52
TUBE1-206ENST00000603722 CUX2O14529 1486 aa30.76■■■□□ 2.52
TUBE1-206ENST00000603722 RSF1Q96T23 1441 aaPredicted RBP30.72■■■□□ 2.51
TUBE1-206ENST00000603722 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
TUBE1-206ENST00000603722 CADPSQ9ULU8 1353 aa30.58■■■□□ 2.49
TUBE1-206ENST00000603722 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
TUBE1-206ENST00000603722 THOC2Q8NI27 1593 aaKnown RBP30.5■■■□□ 2.47
TUBE1-206ENST00000603722 TOP2AP11388 1531 aaKnown RBP30.5■■■□□ 2.47
TUBE1-206ENST00000603722 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
TUBE1-206ENST00000603722 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
TUBE1-206ENST00000603722 CFTRP13569 1480 aa30.31■■■□□ 2.44
TUBE1-206ENST00000603722 MRC2Q9UBG0 1479 aa30.29■■■□□ 2.44
TUBE1-206ENST00000603722 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
TUBE1-206ENST00000603722 CEP164Q9UPV0 1460 aa30.25■■■□□ 2.43
TUBE1-206ENST00000603722 WDR62O43379 1518 aa30.19■■■□□ 2.42
TUBE1-206ENST00000603722 CCDC88BA6NC98 1476 aa30.15■■■□□ 2.42
TUBE1-206ENST00000603722 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
TUBE1-206ENST00000603722 PRDM2Q13029 1718 aa29.87■■■□□ 2.37
TUBE1-206ENST00000603722 TOPBP1Q92547 1522 aa29.7■■■□□ 2.34
TUBE1-206ENST00000603722 SUPT5HO00267 1087 aaKnown RBP29.64■■■□□ 2.34
TUBE1-206ENST00000603722 IFT140Q96RY7 1462 aa29.62■■■□□ 2.33
TUBE1-206ENST00000603722 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
TUBE1-206ENST00000603722 DNMBPQ6XZF7 1577 aa29.6■■■□□ 2.33
TUBE1-206ENST00000603722 ZNF608Q9ULD9 1512 aaPredicted RBP29.55■■■□□ 2.32
TUBE1-206ENST00000603722 POLA1P09884 1462 aaPredicted RBP29.43■■■□□ 2.3
TUBE1-206ENST00000603722 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
TUBE1-206ENST00000603722 EIF4G3O43432 1585 aaKnown RBP29.38■■■□□ 2.29
TUBE1-206ENST00000603722 TARBP1Q13395 1621 aaKnown RBP29.37■■■□□ 2.29
TUBE1-206ENST00000603722 AQRO60306 1485 aaKnown RBP eCLIP29.32■■■□□ 2.28
TUBE1-206ENST00000603722 RAD54L2Q9Y4B4 1467 aa29.32■■■□□ 2.28
TUBE1-206ENST00000603722 CUX1P39880 1505 aa29.31■■■□□ 2.28
TUBE1-206ENST00000603722 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
TUBE1-206ENST00000603722 SOGA1O94964 1423 aa29.29■■■□□ 2.28
TUBE1-206ENST00000603722 TRIM41Q8WV44 630 aa29.21■■■□□ 2.27
TUBE1-206ENST00000603722 TDRD9Q8NDG6 1382 aaKnown RBP29.21■■■□□ 2.27
TUBE1-206ENST00000603722 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
TUBE1-206ENST00000603722 FBLN2P98095 1184 aa29.08■■■□□ 2.25
TUBE1-206ENST00000603722 SNAPC4Q5SXM2 1469 aa29.06■■■□□ 2.24
TUBE1-206ENST00000603722 CHD1O14646 1710 aa29.01■■■□□ 2.23
TUBE1-206ENST00000603722 GRIN2BQ13224 1484 aa29.01■■■□□ 2.23
TUBE1-206ENST00000603722 WRNQ14191 1432 aaPredicted RBP eCLIP28.97■■■□□ 2.23
TUBE1-206ENST00000603722 ABCA10Q8WWZ4 1543 aa28.97■■■□□ 2.23
TUBE1-206ENST00000603722 RIMBP3CA6NJZ7 1639 aa28.97■■■□□ 2.23
TUBE1-206ENST00000603722 RIMBP3BA6NNM3 1639 aa28.97■■■□□ 2.23
TUBE1-206ENST00000603722 RIMBP3Q9UFD9 1639 aa28.97■■■□□ 2.23
TUBE1-206ENST00000603722 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
TUBE1-206ENST00000603722 ARHGEF11O15085 1522 aa28.95■■■□□ 2.23
TUBE1-206ENST00000603722 GAPVD1Q14C86 1478 aa28.94■■■□□ 2.22
TUBE1-206ENST00000603722 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
TUBE1-206ENST00000603722 CHMP7Q8WUX9 453 aaPredicted RBP28.91■■■□□ 2.22
TUBE1-206ENST00000603722 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
TUBE1-206ENST00000603722 ABCA5Q8WWZ7 1642 aa28.88■■■□□ 2.21
TUBE1-206ENST00000603722 BIVM-ERCC5R4GMW8 1640 aa28.88■■■□□ 2.21
TUBE1-206ENST00000603722 SYNJ2O15056 1496 aa28.86■■■□□ 2.21
TUBE1-206ENST00000603722 PBRM1Q86U86 1689 aa28.83■■■□□ 2.21
TUBE1-206ENST00000603722 CLASP1Q7Z460 1538 aa28.77■■■□□ 2.2
TUBE1-206ENST00000603722 CYB5RLQ6IPT4 315 aa28.73■■■□□ 2.19
TUBE1-206ENST00000603722 ARAP1Q96P48 1450 aa28.71■■■□□ 2.19
TUBE1-206ENST00000603722 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
TUBE1-206ENST00000603722 GRIN2AQ12879 1464 aa28.63■■■□□ 2.17
TUBE1-206ENST00000603722 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
TUBE1-206ENST00000603722 ERICH3Q5RHP9 1530 aa28.59■■■□□ 2.17
TUBE1-206ENST00000603722 NUP160Q12769 1436 aa28.52■■■□□ 2.16
TUBE1-206ENST00000603722 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
TUBE1-206ENST00000603722 KIF27Q86VH2 1401 aa28.4■■■□□ 2.14
TUBE1-206ENST00000603722 ERCC6L2Q5T890 1561 aa28.37■■■□□ 2.13
TUBE1-206ENST00000603722 IGF1RP08069 1367 aa28.33■■■□□ 2.13
TUBE1-206ENST00000603722 TRHP20396 242 aaPredicted RBP28.31■■■□□ 2.12
TUBE1-206ENST00000603722 SHROOM2Q13796 1616 aa28.3■■■□□ 2.12
TUBE1-206ENST00000603722 RUSC2Q8N2Y8 1516 aa28.25■■■□□ 2.11
TUBE1-206ENST00000603722 PRG4Q92954 1404 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms