RNA–Protein interactions for RNA: ENST00000603669.5

GRAMD1A-213, Transcript of GRAM domain containing 1A, humanhuman

TSL 5

Gene GRAMD1A, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-213ENST00000603669 DNMT1P26358 1616 aaKnown RBP24.46■■□□□ 1.51
GRAMD1A-213ENST00000603669 TNRQ92752 1358 aa24.46■■□□□ 1.51
GRAMD1A-213ENST00000603669 HSPA1LP34931 641 aa24.46■■□□□ 1.51
GRAMD1A-213ENST00000603669 WASHC2CQ9Y4E1 1318 aa24.45■■□□□ 1.5
GRAMD1A-213ENST00000603669 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
GRAMD1A-213ENST00000603669 ANKLE2Q86XL3 938 aa24.42■■□□□ 1.5
GRAMD1A-213ENST00000603669 TOM1O60784 492 aa24.41■■□□□ 1.5
GRAMD1A-213ENST00000603669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.51e-6■■■□□ 17.1
GRAMD1A-213ENST00000603669 EHBP1L1Q8N3D4 1523 aa24.4■■□□□ 1.5
GRAMD1A-213ENST00000603669 RSPH4AQ5TD94 716 aa24.4■■□□□ 1.5
GRAMD1A-213ENST00000603669 THEMISQ8N1K5 641 aaPredicted RBP24.4■■□□□ 1.5
GRAMD1A-213ENST00000603669 SHANK2Q9UPX8 1470 aa24.38■■□□□ 1.49
GRAMD1A-213ENST00000603669 PZPP20742 1482 aa24.38■■□□□ 1.49
GRAMD1A-213ENST00000603669 CCDC141Q6ZP82 1450 aa24.37■■□□□ 1.49
GRAMD1A-213ENST00000603669 MIA2Q96PC5 1412 aa24.36■■□□□ 1.49
GRAMD1A-213ENST00000603669 NEURL4Q96JN8 1562 aa24.36■■□□□ 1.49
GRAMD1A-213ENST00000603669 CAMSAP2Q08AD1 1489 aa24.34■■□□□ 1.49
GRAMD1A-213ENST00000603669 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
GRAMD1A-213ENST00000603669 TSPY4P0CV99 314 aa24.34■■□□□ 1.49
GRAMD1A-213ENST00000603669 TSPY10P0CW01 314 aa24.34■■□□□ 1.49
GRAMD1A-213ENST00000603669 CPS1P31327 1500 aa24.34■■□□□ 1.49
GRAMD1A-213ENST00000603669 KDM5DQ9BY66 1539 aa24.34■■□□□ 1.49
GRAMD1A-213ENST00000603669 NPHP4O75161 1426 aaPredicted RBP24.29■■□□□ 1.48
GRAMD1A-213ENST00000603669 POLR1AO95602 1720 aaPredicted RBP24.29■■□□□ 1.48
GRAMD1A-213ENST00000603669 NLRP1Q9C000 1473 aa24.28■■□□□ 1.48
GRAMD1A-213ENST00000603669 UGGT1Q9NYU2 1555 aa24.28■■□□□ 1.48
GRAMD1A-213ENST00000603669 VWDEQ8N2E2 1590 aa24.27■■□□□ 1.48
GRAMD1A-213ENST00000603669 FAM135AQ9P2D6 1515 aa24.26■■□□□ 1.47
GRAMD1A-213ENST00000603669 SENP3Q9H4L4 574 aaPredicted RBP24.26■■□□□ 1.47
GRAMD1A-213ENST00000603669 MED14O60244 1454 aa24.26■■□□□ 1.47
GRAMD1A-213ENST00000603669 MED1Q15648 1581 aaPredicted RBP24.25■■□□□ 1.47
GRAMD1A-213ENST00000603669 ARHGEF5Q12774 1597 aa24.2■■□□□ 1.47
GRAMD1A-213ENST00000603669 ALKQ9UM73 1620 aa24.2■■□□□ 1.46
GRAMD1A-213ENST00000603669 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
GRAMD1A-213ENST00000603669 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
GRAMD1A-213ENST00000603669 ABCC3O15438 1527 aa24.17■■□□□ 1.46
GRAMD1A-213ENST00000603669 KANK4Q5T7N3 995 aaPredicted RBP24.16■■□□□ 1.46
GRAMD1A-213ENST00000603669 LRRC7Q96NW7 1537 aa24.15■■□□□ 1.46
GRAMD1A-213ENST00000603669 IQGAP1P46940 1657 aa24.14■■□□□ 1.45
GRAMD1A-213ENST00000603669 ERVK-7P63135 1459 aa24.13■■□□□ 1.45
GRAMD1A-213ENST00000603669 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
GRAMD1A-213ENST00000603669 LTKP29376 864 aa24.13■■□□□ 1.45
GRAMD1A-213ENST00000603669 TXNDC2Q86VQ3 553 aa24.12■■□□□ 1.45
GRAMD1A-213ENST00000603669 STRCP1A6NGW2 1772 aa24.11■■□□□ 1.45
GRAMD1A-213ENST00000603669 RNF17Q9BXT8 1623 aaKnown RBP24.11■■□□□ 1.45
GRAMD1A-213ENST00000603669 LOC105371045A0A1W2PR82 267 aa24.11■■□□□ 1.45
GRAMD1A-213ENST00000603669 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.44
GRAMD1A-213ENST00000603669 CFAP65Q6ZU64 1925 aaKnown RBP24.07■■□□□ 1.44
GRAMD1A-213ENST00000603669 MROH1Q8NDA8 1641 aa24.06■■□□□ 1.44
GRAMD1A-213ENST00000603669 VPS8Q8N3P4 1428 aa24.05■■□□□ 1.44
GRAMD1A-213ENST00000603669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.05■■□□□ 1.442e-7■■□□□ 13.4
GRAMD1A-213ENST00000603669 RRP7BPQ9NSQ0 103 aa24.05■■□□□ 1.44
GRAMD1A-213ENST00000603669 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
GRAMD1A-213ENST00000603669 ZC3H13Q5T200 1668 aaKnown RBP24.05■■□□□ 1.44
GRAMD1A-213ENST00000603669 EIF2AK4Q9P2K8 1649 aaKnown RBP24.02■■□□□ 1.44
GRAMD1A-213ENST00000603669 MYOM3Q5VTT5 1437 aa24.02■■□□□ 1.44
GRAMD1A-213ENST00000603669 EID1Q9Y6B2 187 aa24.02■■□□□ 1.44
GRAMD1A-213ENST00000603669 UBR1Q8IWV7 1749 aa24.01■■□□□ 1.43
GRAMD1A-213ENST00000603669 RGS17Q9UGC6 210 aaPredicted RBP24.01■■□□□ 1.43
GRAMD1A-213ENST00000603669 CEP152O94986 1710 aa24.01■■□□□ 1.43
GRAMD1A-213ENST00000603669 DUOX2Q9NRD8 1548 aa24■■□□□ 1.43
GRAMD1A-213ENST00000603669 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
GRAMD1A-213ENST00000603669 KIF15Q9NS87 1388 aa23.99■■□□□ 1.43
GRAMD1A-213ENST00000603669 STAG3Q9UJ98 1225 aa23.98■■□□□ 1.43
GRAMD1A-213ENST00000603669 ARHGAP31Q2M1Z3 1444 aa23.98■■□□□ 1.43
GRAMD1A-213ENST00000603669 SYNMO15061 1565 aa23.98■■□□□ 1.43
GRAMD1A-213ENST00000603669 SLIT1O75093 1534 aa23.97■■□□□ 1.43
GRAMD1A-213ENST00000603669 ABCC5O15440 1437 aa23.96■■□□□ 1.43
GRAMD1A-213ENST00000603669 TMEM2Q9UHN6 1383 aa23.95■■□□□ 1.42
GRAMD1A-213ENST00000603669 IDI1Q13907 227 aa23.95■■□□□ 1.42
GRAMD1A-213ENST00000603669 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
GRAMD1A-213ENST00000603669 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
GRAMD1A-213ENST00000603669 SLC26A8Q96RN1 970 aa23.92■■□□□ 1.42
GRAMD1A-213ENST00000603669 ERBINQ96RT1 1412 aa23.92■■□□□ 1.42
GRAMD1A-213ENST00000603669 CHIC2Q9UKJ5 165 aa23.91■■□□□ 1.42
GRAMD1A-213ENST00000603669 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
GRAMD1A-213ENST00000603669 PRDM15P57071 1507 aaPredicted RBP23.9■■□□□ 1.42
GRAMD1A-213ENST00000603669 KCNA6P17658 529 aa23.9■■□□□ 1.42
GRAMD1A-213ENST00000603669 PROSER2Q86WR7 435 aaPredicted RBP23.89■■□□□ 1.41
GRAMD1A-213ENST00000603669 FAM135BQ49AJ0 1406 aa23.89■■□□□ 1.41
GRAMD1A-213ENST00000603669 KANK1Q14678 1352 aa23.89■■□□□ 1.41
GRAMD1A-213ENST00000603669 PIK3C2BO00750 1634 aa23.88■■□□□ 1.41
GRAMD1A-213ENST00000603669 XIRP1Q702N8 1843 aaKnown RBP23.88■■□□□ 1.41
GRAMD1A-213ENST00000603669 DAPK1P53355 1430 aa23.85■■□□□ 1.41
GRAMD1A-213ENST00000603669 POTEAQ6S8J7 498 aa23.85■■□□□ 1.41
GRAMD1A-213ENST00000603669 APLP2Q06481 763 aa23.83■■□□□ 1.41
GRAMD1A-213ENST00000603669 EFCAB6Q5THR3 1501 aa23.83■■□□□ 1.41
GRAMD1A-213ENST00000603669 BCANQ96GW7 911 aa23.82■■□□□ 1.4
GRAMD1A-213ENST00000603669 PTPN23Q9H3S7 1636 aa23.81■■□□□ 1.4
GRAMD1A-213ENST00000603669 ANKRD30AQ9BXX3 1397 aa23.8■■□□□ 1.4
GRAMD1A-213ENST00000603669 TET3O43151 1660 aa23.79■■□□□ 1.4
GRAMD1A-213ENST00000603669 CROCC2H7BZ55 1655 aa23.78■■□□□ 1.4
GRAMD1A-213ENST00000603669 FGD6Q6ZV73 1430 aa23.77■■□□□ 1.4
GRAMD1A-213ENST00000603669 SLC52A1Q9NWF4 448 aa23.77■■□□□ 1.4
GRAMD1A-213ENST00000603669 LMTK2Q8IWU2 1503 aa23.77■■□□□ 1.4
GRAMD1A-213ENST00000603669 NOS1P29475 1434 aa23.76■■□□□ 1.39
GRAMD1A-213ENST00000603669 SLAIN2Q9P270 581 aa23.76■■□□□ 1.39
GRAMD1A-213ENST00000603669 ROBO1Q9Y6N7 1651 aa23.73■■□□□ 1.39
GRAMD1A-213ENST00000603669 KDM5AP29375 1690 aaKnown RBP23.72■■□□□ 1.39
GRAMD1A-213ENST00000603669 MSH6P52701 1360 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms