RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 RNF17Q9BXT8 1623 aaKnown RBP34.33■■■■□ 3.09
UBE2E3-206ENST00000602479 CERKQ8TCT0 537 aa34.32■■■■□ 3.08
UBE2E3-206ENST00000602479 EIF2AK4Q9P2K8 1649 aaKnown RBP34.31■■■■□ 3.08
UBE2E3-206ENST00000602479 KIF3BO15066 747 aa34.3■■■■□ 3.08
UBE2E3-206ENST00000602479 TSPY4P0CV99 314 aa34.28■■■■□ 3.08
UBE2E3-206ENST00000602479 TSPY10P0CW01 314 aa34.28■■■■□ 3.08
UBE2E3-206ENST00000602479 ZC3H13Q5T200 1668 aaKnown RBP34.26■■■■□ 3.08
UBE2E3-206ENST00000602479 PTPN23Q9H3S7 1636 aa34.26■■■■□ 3.07
UBE2E3-206ENST00000602479 PZPP20742 1482 aa34.25■■■■□ 3.07
UBE2E3-206ENST00000602479 PLA2R1Q13018 1463 aa34.24■■■■□ 3.07
UBE2E3-206ENST00000602479 DNMT1P26358 1616 aaKnown RBP34.23■■■■□ 3.07
UBE2E3-206ENST00000602479 MROH1Q8NDA8 1641 aa34.21■■■■□ 3.07
UBE2E3-206ENST00000602479 A2ML1A8K2U0 1454 aa34.2■■■■□ 3.07
UBE2E3-206ENST00000602479 LTBP4Q8N2S1 1624 aa34.2■■■■□ 3.07
UBE2E3-206ENST00000602479 POLR1AO95602 1720 aaPredicted RBP34.19■■■■□ 3.06
UBE2E3-206ENST00000602479 TCOF1Q13428 1488 aaKnown RBP34.19■■■■□ 3.06
UBE2E3-206ENST00000602479 CEP152O94986 1710 aa34.17■■■■□ 3.06
UBE2E3-206ENST00000602479 SHANK2Q9UPX8 1470 aa34.17■■■■□ 3.06
UBE2E3-206ENST00000602479 ABCC3O15438 1527 aa34.15■■■■□ 3.06
UBE2E3-206ENST00000602479 DUOX2Q9NRD8 1548 aa34.15■■■■□ 3.06
UBE2E3-206ENST00000602479 APLP2Q06481 763 aa34.15■■■■□ 3.06
UBE2E3-206ENST00000602479 WASHC2CQ9Y4E1 1318 aa34.14■■■■□ 3.06
UBE2E3-206ENST00000602479 TNRQ92752 1358 aa34.13■■■■□ 3.05
UBE2E3-206ENST00000602479 FGD6Q6ZV73 1430 aa34.12■■■■□ 3.05
UBE2E3-206ENST00000602479 NCKAP5LQ9HCH0 1330 aa34.1■■■■□ 3.05
UBE2E3-206ENST00000602479 FBXO31Q5XUX0 539 aaPredicted RBP34.1■■■■□ 3.05
UBE2E3-206ENST00000602479 ABCC5O15440 1437 aa34.1■■■■□ 3.05
UBE2E3-206ENST00000602479 CFAP65Q6ZU64 1925 aaKnown RBP34.06■■■■□ 3.04
UBE2E3-206ENST00000602479 DAPK1P53355 1430 aa34.06■■■■□ 3.04
UBE2E3-206ENST00000602479 PKD2Q13563 968 aa34.06■■■■□ 3.04
UBE2E3-206ENST00000602479 PRDM15P57071 1507 aaPredicted RBP34.05■■■■□ 3.04
UBE2E3-206ENST00000602479 SPATA31D1Q6ZQQ2 1576 aa34.05■■■■□ 3.04
UBE2E3-206ENST00000602479 NEURL4Q96JN8 1562 aa34.05■■■■□ 3.04
UBE2E3-206ENST00000602479 DEPDC5O75140 1603 aa34.04■■■■□ 3.04
UBE2E3-206ENST00000602479 IQSEC2Q5JU85 1478 aa34.04■■■■□ 3.04
UBE2E3-206ENST00000602479 NLRP1Q9C000 1473 aa34.03■■■■□ 3.04
UBE2E3-206ENST00000602479 KIF15Q9NS87 1388 aa34.02■■■■□ 3.04
UBE2E3-206ENST00000602479 ERBINQ96RT1 1412 aa34.02■■■■□ 3.04
UBE2E3-206ENST00000602479 UGGT1Q9NYU2 1555 aa33.98■■■■□ 3.03
UBE2E3-206ENST00000602479 ERVK-7P63135 1459 aa33.97■■■■□ 3.03
UBE2E3-206ENST00000602479 ZNF335Q9H4Z2 1342 aaPredicted RBP33.95■■■■□ 3.03
UBE2E3-206ENST00000602479 UBR1Q8IWV7 1749 aa33.91■■■■□ 3.02
UBE2E3-206ENST00000602479 RRP7BPQ9NSQ0 103 aa33.9■■■■□ 3.02
UBE2E3-206ENST00000602479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.88■■■■□ 3.019e-7■■■□□ 16.5
UBE2E3-206ENST00000602479 IQGAP1P46940 1657 aa33.86■■■■□ 3.01
UBE2E3-206ENST00000602479 ADGRL2O95490 1459 aa33.85■■■■□ 3.01
UBE2E3-206ENST00000602479 ARHGAP31Q2M1Z3 1444 aa33.85■■■■□ 3.01
UBE2E3-206ENST00000602479 ANKRD30AQ9BXX3 1397 aa33.85■■■■□ 3.01
UBE2E3-206ENST00000602479 VWDEQ8N2E2 1590 aa33.84■■■■□ 3.01
UBE2E3-206ENST00000602479 MED14O60244 1454 aa33.83■■■■□ 3.01
UBE2E3-206ENST00000602479 THEMISQ8N1K5 641 aaPredicted RBP33.83■■■■□ 3.01
UBE2E3-206ENST00000602479 CHIC2Q9UKJ5 165 aa33.8■■■■□ 3
UBE2E3-206ENST00000602479 LMTK2Q8IWU2 1503 aa33.79■■■■□ 3
UBE2E3-206ENST00000602479 ANKLE2Q86XL3 938 aa33.78■■■■□ 3
UBE2E3-206ENST00000602479 NPHP4O75161 1426 aaPredicted RBP33.76■■■□□ 2.99
UBE2E3-206ENST00000602479 PIK3C2BO00750 1634 aa33.75■■■□□ 2.99
UBE2E3-206ENST00000602479 CPS1P31327 1500 aa33.75■■■□□ 2.99
UBE2E3-206ENST00000602479 KANK1Q14678 1352 aa33.74■■■□□ 2.99
UBE2E3-206ENST00000602479 EFCAB6Q5THR3 1501 aa33.73■■■□□ 2.99
UBE2E3-206ENST00000602479 KDM5AP29375 1690 aaKnown RBP33.72■■■□□ 2.99
UBE2E3-206ENST00000602479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.72■■■□□ 2.99
UBE2E3-206ENST00000602479 STRCP1A6NGW2 1772 aa33.71■■■□□ 2.99
UBE2E3-206ENST00000602479 FAM50AQ14320 339 aaKnown RBP33.71■■■□□ 2.99
UBE2E3-206ENST00000602479 SLIT1O75093 1534 aa33.69■■■□□ 2.98
UBE2E3-206ENST00000602479 SYNMO15061 1565 aa33.68■■■□□ 2.98
UBE2E3-206ENST00000602479 ARHGAP23Q9P227 1491 aa33.68■■■□□ 2.98
UBE2E3-206ENST00000602479 SCAF11Q99590 1463 aaKnown RBP33.64■■■□□ 2.98
UBE2E3-206ENST00000602479 ANKRD50Q9ULJ7 1429 aa33.63■■■□□ 2.97
UBE2E3-206ENST00000602479 TET3O43151 1660 aa33.62■■■□□ 2.97
UBE2E3-206ENST00000602479 UNC13BO14795 1591 aa33.62■■■□□ 2.97
UBE2E3-206ENST00000602479 GCC2Q8IWJ2 1684 aa33.61■■■□□ 2.97
UBE2E3-206ENST00000602479 UBAP1LF5GYI3 381 aa33.61■■■□□ 2.97
UBE2E3-206ENST00000602479 NOS1P29475 1434 aa33.57■■■□□ 2.96
UBE2E3-206ENST00000602479 ADGRB3O60242 1522 aa33.54■■■□□ 2.96
UBE2E3-206ENST00000602479 MYO5BQ9ULV0 1848 aa33.54■■■□□ 2.96
UBE2E3-206ENST00000602479 RPRD2Q5VT52 1461 aaKnown RBP33.54■■■□□ 2.96
UBE2E3-206ENST00000602479 ALKQ9UM73 1620 aa33.51■■■□□ 2.96
UBE2E3-206ENST00000602479 LTKP29376 864 aa33.51■■■□□ 2.95
UBE2E3-206ENST00000602479 ROCK1Q13464 1354 aa33.5■■■□□ 2.95
UBE2E3-206ENST00000602479 TMEM2Q9UHN6 1383 aa33.5■■■□□ 2.95
UBE2E3-206ENST00000602479 XIRP1Q702N8 1843 aaKnown RBP33.49■■■□□ 2.95
UBE2E3-206ENST00000602479 E9PCH4 1651 aa33.48■■■□□ 2.95
UBE2E3-206ENST00000602479 LRRC7Q96NW7 1537 aa33.48■■■□□ 2.95
UBE2E3-206ENST00000602479 IQGAP3Q86VI3 1631 aa33.48■■■□□ 2.95
UBE2E3-206ENST00000602479 IDI1Q13907 227 aa33.46■■■□□ 2.95
UBE2E3-206ENST00000602479 TXNDC2Q86VQ3 553 aa33.46■■■□□ 2.95
UBE2E3-206ENST00000602479 DISP3Q9P2K9 1392 aa33.43■■■□□ 2.94
UBE2E3-206ENST00000602479 EID1Q9Y6B2 187 aa33.42■■■□□ 2.94
UBE2E3-206ENST00000602479 STAG3Q9UJ98 1225 aa33.41■■■□□ 2.94
UBE2E3-206ENST00000602479 TOM1O60784 492 aa33.39■■■□□ 2.94
UBE2E3-206ENST00000602479 TMEM131LA2VDJ0 1609 aa33.39■■■□□ 2.93
UBE2E3-206ENST00000602479 PPARGC1BQ86YN6 1023 aaKnown RBP33.38■■■□□ 2.93
UBE2E3-206ENST00000602479 SLC52A1Q9NWF4 448 aa33.36■■■□□ 2.93
UBE2E3-206ENST00000602479 SCAF1Q9H7N4 1312 aaKnown RBP33.33■■■□□ 2.93
UBE2E3-206ENST00000602479 PIP4K2BP78356 416 aa33.33■■■□□ 2.93
UBE2E3-206ENST00000602479 ZFYVE9O95405 1425 aa33.3■■■□□ 2.92
UBE2E3-206ENST00000602479 ITGAEP38570 1179 aa33.29■■■□□ 2.92
UBE2E3-206ENST00000602479 NWD1Q149M9 1564 aa33.28■■■□□ 2.92
UBE2E3-206ENST00000602479 HSPA1LP34931 641 aa33.27■■■□□ 2.92
UBE2E3-206ENST00000602479 RRBP1Q9P2E9 1410 aaKnown RBP33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms