RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 NISCHQ9Y2I1 1504 aa54.4■■■■■ 6.3
UBE2E3-206ENST00000602479 CCDC180Q9P1Z9 1646 aa48.87■■■■■ 5.41
UBE2E3-206ENST00000602479 ABCC9O60706 1549 aa48.37■■■■■ 5.33
UBE2E3-206ENST00000602479 RB1CC1Q8TDY2 1594 aa46.26■■■■■ 5
UBE2E3-206ENST00000602479 NACADO15069 1562 aa46■■■■■ 4.95
UBE2E3-206ENST00000602479 DCAF8L2P0C7V8 631 aa45.52■■■■■ 4.88
UBE2E3-206ENST00000602479 MYO15BQ96JP2 1530 aa45.47■■■■■ 4.87
UBE2E3-206ENST00000602479 UNC13AQ9UPW8 1703 aa45.43■■■■■ 4.86
UBE2E3-206ENST00000602479 ZCCHC6Q5VYS8 1495 aaKnown RBP45.18■■■■■ 4.82
UBE2E3-206ENST00000602479 DNAJC5BQ9UF47 199 aa45.04■■■■■ 4.8
UBE2E3-206ENST00000602479 DCAF1Q9Y4B6 1507 aa45■■■■■ 4.79
UBE2E3-206ENST00000602479 PABPN1Q86U42 306 aaKnown RBP eCLIP44.95■■■■■ 4.79
UBE2E3-206ENST00000602479 BICRAQ9NZM4 1560 aa44.94■■■■■ 4.79
UBE2E3-206ENST00000602479 SCRIBQ14160 1630 aa44.44■■■■■ 4.7
UBE2E3-206ENST00000602479 SHROOM4Q9ULL8 1493 aa44.35■■■■■ 4.69
UBE2E3-206ENST00000602479 CC2D2AQ9P2K1 1620 aa43.81■■■■■ 4.6
UBE2E3-206ENST00000602479 EIF4G1Q04637 1599 aaKnown RBP43.78■■■■■ 4.6
UBE2E3-206ENST00000602479 CECR2Q9BXF3 1484 aa43.55■■■■■ 4.56
UBE2E3-206ENST00000602479 SMARCA4P51532 1647 aa42.46■■■■■ 4.39
UBE2E3-206ENST00000602479 NCAPD3P42695 1498 aa42.39■■■■■ 4.38
UBE2E3-206ENST00000602479 ATAD2BQ9ULI0 1458 aa42.31■■■■■ 4.36
UBE2E3-206ENST00000602479 SMARCA2P51531 1590 aa42.27■■■■■ 4.36
UBE2E3-206ENST00000602479 BAZ1AQ9NRL2 1556 aaPredicted RBP42.23■■■■■ 4.35
UBE2E3-206ENST00000602479 HMGXB3Q12766 1538 aa42.21■■■■■ 4.35
UBE2E3-206ENST00000602479 PEG3Q9GZU2 1588 aa42.05■■■■■ 4.32
UBE2E3-206ENST00000602479 BAZ1BQ9UIG0 1483 aaKnown RBP41.93■■■■■ 4.3
UBE2E3-206ENST00000602479 MROH2BQ7Z745 1585 aa41.93■■■■■ 4.3
UBE2E3-206ENST00000602479 ERCC6Q03468 1493 aa41.72■■■■■ 4.27
UBE2E3-206ENST00000602479 NESP48681 1621 aa41.67■■■■■ 4.26
UBE2E3-206ENST00000602479 CUX2O14529 1486 aa41.61■■■■■ 4.25
UBE2E3-206ENST00000602479 WIZO95785 1651 aa41.5■■■■■ 4.23
UBE2E3-206ENST00000602479 LAMC3Q9Y6N6 1575 aa41.49■■■■■ 4.23
UBE2E3-206ENST00000602479 THOC2Q8NI27 1593 aaKnown RBP41.33■■■■■ 4.21
UBE2E3-206ENST00000602479 KIF21AQ7Z4S6 1674 aa41.31■■■■■ 4.2
UBE2E3-206ENST00000602479 DNAJC5Q9H3Z4 198 aa41.14■■■■■ 4.18
UBE2E3-206ENST00000602479 PDS5BQ9NTI5 1447 aa41.1■■■■■ 4.17
UBE2E3-206ENST00000602479 RSF1Q96T23 1441 aaPredicted RBP41.1■■■■■ 4.17
UBE2E3-206ENST00000602479 CADPSQ9ULU8 1353 aa41.07■■■■■ 4.16
UBE2E3-206ENST00000602479 TOP2AP11388 1531 aaKnown RBP40.97■■■■■ 4.15
UBE2E3-206ENST00000602479 MRC2Q9UBG0 1479 aa40.8■■■■■ 4.12
UBE2E3-206ENST00000602479 WDR62O43379 1518 aa40.76■■■■■ 4.12
UBE2E3-206ENST00000602479 CFTRP13569 1480 aa40.72■■■■■ 4.11
UBE2E3-206ENST00000602479 CEP164Q9UPV0 1460 aa40.7■■■■■ 4.11
UBE2E3-206ENST00000602479 FANCD2Q9BXW9 1451 aa40.66■■■■■ 4.1
UBE2E3-206ENST00000602479 PRDM2Q13029 1718 aa40.64■■■■■ 4.1
UBE2E3-206ENST00000602479 CCDC88BA6NC98 1476 aa40.42■■■■■ 4.06
UBE2E3-206ENST00000602479 URB2Q14146 1524 aaKnown RBP40.35■■■■■ 4.05
UBE2E3-206ENST00000602479 TOPBP1Q92547 1522 aa39.96■■■■□ 3.99
UBE2E3-206ENST00000602479 DNMBPQ6XZF7 1577 aa39.89■■■■□ 3.98
UBE2E3-206ENST00000602479 ABCC8Q09428 1581 aa39.85■■■■□ 3.97
UBE2E3-206ENST00000602479 IFT140Q96RY7 1462 aa39.85■■■■□ 3.97
UBE2E3-206ENST00000602479 ZNF608Q9ULD9 1512 aaPredicted RBP39.78■■■■□ 3.96
UBE2E3-206ENST00000602479 EIF4G3O43432 1585 aaKnown RBP39.69■■■■□ 3.94
UBE2E3-206ENST00000602479 TARBP1Q13395 1621 aaKnown RBP39.66■■■■□ 3.94
UBE2E3-206ENST00000602479 OSCARQ8IYS5 282 aa39.59■■■■□ 3.93
UBE2E3-206ENST00000602479 POLA1P09884 1462 aaPredicted RBP39.56■■■■□ 3.92
UBE2E3-206ENST00000602479 CHD1O14646 1710 aa39.4■■■■□ 3.9
UBE2E3-206ENST00000602479 TRIM41Q8WV44 630 aa39.4■■■■□ 3.9
UBE2E3-206ENST00000602479 AQRO60306 1485 aaKnown RBP eCLIP39.39■■■■□ 3.9
UBE2E3-206ENST00000602479 CUX1P39880 1505 aa39.39■■■■□ 3.9
UBE2E3-206ENST00000602479 RAD54L2Q9Y4B4 1467 aa39.37■■■■□ 3.89
UBE2E3-206ENST00000602479 FGD5Q6ZNL6 1462 aa39.35■■■■□ 3.89
UBE2E3-206ENST00000602479 SUPT5HO00267 1087 aaKnown RBP39.33■■■■□ 3.89
UBE2E3-206ENST00000602479 WDR97A6NE52 1622 aa39.29■■■■□ 3.88
UBE2E3-206ENST00000602479 RIMBP3CA6NJZ7 1639 aa39.29■■■■□ 3.88
UBE2E3-206ENST00000602479 RIMBP3BA6NNM3 1639 aa39.29■■■■□ 3.88
UBE2E3-206ENST00000602479 RIMBP3Q9UFD9 1639 aa39.29■■■■□ 3.88
UBE2E3-206ENST00000602479 SOGA1O94964 1423 aa39.29■■■■□ 3.88
UBE2E3-206ENST00000602479 TDRD9Q8NDG6 1382 aaKnown RBP39.17■■■■□ 3.86
UBE2E3-206ENST00000602479 ARHGEF11O15085 1522 aa39.14■■■■□ 3.86
UBE2E3-206ENST00000602479 SNAPC4Q5SXM2 1469 aa39.06■■■■□ 3.84
UBE2E3-206ENST00000602479 PBRM1Q86U86 1689 aa39.05■■■■□ 3.84
UBE2E3-206ENST00000602479 MAGI1Q96QZ7 1491 aaPredicted RBP38.98■■■■□ 3.83
UBE2E3-206ENST00000602479 GRIN2BQ13224 1484 aa38.98■■■■□ 3.83
UBE2E3-206ENST00000602479 FBLN2P98095 1184 aa38.97■■■■□ 3.83
UBE2E3-206ENST00000602479 ABCA5Q8WWZ7 1642 aa38.95■■■■□ 3.83
UBE2E3-206ENST00000602479 BIVM-ERCC5R4GMW8 1640 aa38.94■■■■□ 3.82
UBE2E3-206ENST00000602479 ABCA10Q8WWZ4 1543 aa38.93■■■■□ 3.82
UBE2E3-206ENST00000602479 TOP2BQ02880 1626 aa38.88■■■■□ 3.81
UBE2E3-206ENST00000602479 GAPVD1Q14C86 1478 aa38.87■■■■□ 3.81
UBE2E3-206ENST00000602479 CLASP1Q7Z460 1538 aa38.87■■■■□ 3.81
UBE2E3-206ENST00000602479 SYNJ2O15056 1496 aa38.84■■■■□ 3.81
UBE2E3-206ENST00000602479 SYNJ1O43426 1573 aa38.83■■■■□ 3.81
UBE2E3-206ENST00000602479 ARAP1Q96P48 1450 aa38.77■■■■□ 3.8
UBE2E3-206ENST00000602479 WRNQ14191 1432 aaPredicted RBP eCLIP38.76■■■■□ 3.8
UBE2E3-206ENST00000602479 CHMP7Q8WUX9 453 aaPredicted RBP38.74■■■■□ 3.79
UBE2E3-206ENST00000602479 CYB5RLQ6IPT4 315 aa38.64■■■■□ 3.78
UBE2E3-206ENST00000602479 ADAMTS12P58397 1594 aa38.61■■■■□ 3.77
UBE2E3-206ENST00000602479 GRIN2AQ12879 1464 aa38.51■■■■□ 3.76
UBE2E3-206ENST00000602479 ERICH3Q5RHP9 1530 aa38.47■■■■□ 3.75
UBE2E3-206ENST00000602479 CEP170Q5SW79 1584 aa38.42■■■■□ 3.74
UBE2E3-206ENST00000602479 FHAD1B1AJZ9 1412 aa38.38■■■■□ 3.73
UBE2E3-206ENST00000602479 NUP160Q12769 1436 aa38.36■■■■□ 3.73
UBE2E3-206ENST00000602479 SHROOM2Q13796 1616 aa38.29■■■■□ 3.72
UBE2E3-206ENST00000602479 ERCC6L2Q5T890 1561 aa38.26■■■■□ 3.72
UBE2E3-206ENST00000602479 TRHP20396 242 aaPredicted RBP38.1■■■■□ 3.69
UBE2E3-206ENST00000602479 RUSC2Q8N2Y8 1516 aa38.08■■■■□ 3.69
UBE2E3-206ENST00000602479 CUL7Q14999 1698 aa38.04■■■■□ 3.68
UBE2E3-206ENST00000602479 KIF27Q86VH2 1401 aa37.98■■■■□ 3.67
UBE2E3-206ENST00000602479 IGF1RP08069 1367 aa37.91■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms