RNA–Protein interactions for RNA: ENST00000599316.1

AC243960.3-201, humanhuman

TSL 4 BASIC

Gene AC243960.3, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243960.3-201ENST00000599316 HNRNPMP52272 730 aaKnown RBP eCLIP12.59□□□□□ -0.39
AC243960.3-201ENST00000599316 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
AC243960.3-201ENST00000599316 PLA2R1Q13018 1463 aa12.57□□□□□ -0.4
AC243960.3-201ENST00000599316 SAMD9LQ8IVG5 1584 aa12.56□□□□□ -0.4
AC243960.3-201ENST00000599316 PIP4K2BP78356 416 aa12.56□□□□□ -0.4
AC243960.3-201ENST00000599316 CFDP1Q9UEE9 299 aaPredicted RBP12.56□□□□□ -0.4
AC243960.3-201ENST00000599316 CLTCQ00610 1675 aaKnown RBP12.56□□□□□ -0.4
AC243960.3-201ENST00000599316 CASKIN1Q8WXD9 1431 aa12.55□□□□□ -0.4
AC243960.3-201ENST00000599316 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
AC243960.3-201ENST00000599316 ZNF142P52746 1687 aaPredicted RBP12.54□□□□□ -0.4
AC243960.3-201ENST00000599316 A2MP01023 1474 aa12.53□□□□□ -0.4
AC243960.3-201ENST00000599316 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
AC243960.3-201ENST00000599316 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
AC243960.3-201ENST00000599316 PTPRKQ15262 1439 aa12.53□□□□□ -0.4
AC243960.3-201ENST00000599316 CEP170BQ9Y4F5 1589 aaPredicted RBP12.52□□□□□ -0.4
AC243960.3-201ENST00000599316 MYO3AQ8NEV4 1616 aa12.52□□□□□ -0.4
AC243960.3-201ENST00000599316 HSPA1LP34931 641 aa12.52□□□□□ -0.41
AC243960.3-201ENST00000599316 CCNB3Q8WWL7 1395 aa12.52□□□□□ -0.41
AC243960.3-201ENST00000599316 KIAA1107Q9UPP5 1409 aa12.52□□□□□ -0.41
AC243960.3-201ENST00000599316 TCOF1Q13428 1488 aaKnown RBP12.52□□□□□ -0.41
AC243960.3-201ENST00000599316 ATP7AQ04656 1500 aa12.52□□□□□ -0.41
AC243960.3-201ENST00000599316 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.41
AC243960.3-201ENST00000599316 ANKLE2Q86XL3 938 aa12.5□□□□□ -0.41
AC243960.3-201ENST00000599316 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
AC243960.3-201ENST00000599316 A2ML1A8K2U0 1454 aa12.49□□□□□ -0.41
AC243960.3-201ENST00000599316 THEMISQ8N1K5 641 aaPredicted RBP12.49□□□□□ -0.41
AC243960.3-201ENST00000599316 ADGBQ8N7X0 1667 aa12.48□□□□□ -0.41
AC243960.3-201ENST00000599316 CPS1P31327 1500 aa12.48□□□□□ -0.41
AC243960.3-201ENST00000599316 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
AC243960.3-201ENST00000599316 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
AC243960.3-201ENST00000599316 DNMT1P26358 1616 aaKnown RBP12.47□□□□□ -0.41
AC243960.3-201ENST00000599316 MED1Q15648 1581 aaPredicted RBP12.47□□□□□ -0.41
AC243960.3-201ENST00000599316 MTUS2Q5JR59 1369 aa12.46□□□□□ -0.41
AC243960.3-201ENST00000599316 KIF3BO15066 747 aa12.46□□□□□ -0.41
AC243960.3-201ENST00000599316 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
AC243960.3-201ENST00000599316 PLXNC1O60486 1568 aa12.46□□□□□ -0.42
AC243960.3-201ENST00000599316 INO80Q9ULG1 1556 aaPredicted RBP12.46□□□□□ -0.42
AC243960.3-201ENST00000599316 SHANK2Q9UPX8 1470 aa12.46□□□□□ -0.42
AC243960.3-201ENST00000599316 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
AC243960.3-201ENST00000599316 TNRQ92752 1358 aa12.45□□□□□ -0.42
AC243960.3-201ENST00000599316 WASHC2CQ9Y4E1 1318 aa12.45□□□□□ -0.42
AC243960.3-201ENST00000599316 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
AC243960.3-201ENST00000599316 FBXO31Q5XUX0 539 aaPredicted RBP12.44□□□□□ -0.42
AC243960.3-201ENST00000599316 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
AC243960.3-201ENST00000599316 RTEL1-TNFRSF6BF6WH68 1400 aa12.43□□□□□ -0.42
AC243960.3-201ENST00000599316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.42□□□□□ -0.42
AC243960.3-201ENST00000599316 ZNF644Q9H582 1327 aaPredicted RBP12.4□□□□□ -0.42
AC243960.3-201ENST00000599316 FAM135AQ9P2D6 1515 aa12.4□□□□□ -0.42
AC243960.3-201ENST00000599316 NPHP4O75161 1426 aaPredicted RBP12.39□□□□□ -0.43
AC243960.3-201ENST00000599316 MIA2Q96PC5 1412 aa12.39□□□□□ -0.43
AC243960.3-201ENST00000599316 TSPY4P0CV99 314 aa12.39□□□□□ -0.43
AC243960.3-201ENST00000599316 TSPY10P0CW01 314 aa12.39□□□□□ -0.43
AC243960.3-201ENST00000599316 PZPP20742 1482 aa12.38□□□□□ -0.43
AC243960.3-201ENST00000599316 NLRP1Q9C000 1473 aa12.38□□□□□ -0.43
AC243960.3-201ENST00000599316 UGGT1Q9NYU2 1555 aa12.38□□□□□ -0.43
AC243960.3-201ENST00000599316 NEURL4Q96JN8 1562 aa12.37□□□□□ -0.43
AC243960.3-201ENST00000599316 DEPDC5O75140 1603 aa12.37□□□□□ -0.43
AC243960.3-201ENST00000599316 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
AC243960.3-201ENST00000599316 MED14O60244 1454 aa12.36□□□□□ -0.43
AC243960.3-201ENST00000599316 MBD5Q9P267 1494 aa12.36□□□□□ -0.43
AC243960.3-201ENST00000599316 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
AC243960.3-201ENST00000599316 PCGF6Q9BYE7 350 aa12.35□□□□□ -0.43
AC243960.3-201ENST00000599316 CFAP65Q6ZU64 1925 aaKnown RBP12.35□□□□□ -0.43
AC243960.3-201ENST00000599316 VWDEQ8N2E2 1590 aa12.35□□□□□ -0.43
AC243960.3-201ENST00000599316 IQGAP1P46940 1657 aa12.34□□□□□ -0.43
AC243960.3-201ENST00000599316 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
AC243960.3-201ENST00000599316 CCDC141Q6ZP82 1450 aa12.33□□□□□ -0.44
AC243960.3-201ENST00000599316 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
AC243960.3-201ENST00000599316 CEP162Q5TB80 1403 aa12.31□□□□□ -0.44
AC243960.3-201ENST00000599316 TRIM26Q12899 539 aaPredicted RBP12.31□□□□□ -0.44
AC243960.3-201ENST00000599316 LRRC7Q96NW7 1537 aa12.31□□□□□ -0.44
AC243960.3-201ENST00000599316 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
AC243960.3-201ENST00000599316 EID1Q9Y6B2 187 aa12.3□□□□□ -0.44
AC243960.3-201ENST00000599316 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
AC243960.3-201ENST00000599316 TXNDC2Q86VQ3 553 aa12.29□□□□□ -0.44
AC243960.3-201ENST00000599316 SYNMO15061 1565 aa12.29□□□□□ -0.44
AC243960.3-201ENST00000599316 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
AC243960.3-201ENST00000599316 ALKQ9UM73 1620 aa12.28□□□□□ -0.44
AC243960.3-201ENST00000599316 CAMSAP2Q08AD1 1489 aa12.27□□□□□ -0.44
AC243960.3-201ENST00000599316 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
AC243960.3-201ENST00000599316 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
AC243960.3-201ENST00000599316 ZC3H13Q5T200 1668 aaKnown RBP12.26□□□□□ -0.45
AC243960.3-201ENST00000599316 ARHGEF5Q12774 1597 aa12.24□□□□□ -0.45
AC243960.3-201ENST00000599316 NCOA2Q15596 1464 aa12.24□□□□□ -0.45
AC243960.3-201ENST00000599316 SCAF11Q99590 1463 aaKnown RBP12.24□□□□□ -0.45
AC243960.3-201ENST00000599316 ERVK-7P63135 1459 aa12.23□□□□□ -0.45
AC243960.3-201ENST00000599316 FAM135BQ49AJ0 1406 aa12.23□□□□□ -0.45
AC243960.3-201ENST00000599316 LTKP29376 864 aa12.23□□□□□ -0.45
AC243960.3-201ENST00000599316 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
AC243960.3-201ENST00000599316 UBR1Q8IWV7 1749 aa12.23□□□□□ -0.45
AC243960.3-201ENST00000599316 ABCC3O15438 1527 aa12.22□□□□□ -0.45
AC243960.3-201ENST00000599316 PROSER2Q86WR7 435 aaPredicted RBP12.22□□□□□ -0.45
AC243960.3-201ENST00000599316 POTEAQ6S8J7 498 aa12.21□□□□□ -0.45
AC243960.3-201ENST00000599316 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
AC243960.3-201ENST00000599316 KCNA6P17658 529 aa12.2□□□□□ -0.46
AC243960.3-201ENST00000599316 XIRP1Q702N8 1843 aaKnown RBP12.2□□□□□ -0.46
AC243960.3-201ENST00000599316 CEP152O94986 1710 aa12.2□□□□□ -0.46
AC243960.3-201ENST00000599316 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
AC243960.3-201ENST00000599316 BCANQ96GW7 911 aa12.19□□□□□ -0.46
AC243960.3-201ENST00000599316 SLIT1O75093 1534 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms