RNA–Protein interactions for RNA: ENST00000599316.1

AC243960.3-201, humanhuman

TSL 4 BASIC

Gene AC243960.3, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243960.3-201ENST00000599316 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
AC243960.3-201ENST00000599316 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
AC243960.3-201ENST00000599316 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
AC243960.3-201ENST00000599316 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
AC243960.3-201ENST00000599316 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
AC243960.3-201ENST00000599316 ABCC9O60706 1549 aa17.89■□□□□ 0.45
AC243960.3-201ENST00000599316 FOXD1Q16676 465 aa17.8■□□□□ 0.44
AC243960.3-201ENST00000599316 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
AC243960.3-201ENST00000599316 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
AC243960.3-201ENST00000599316 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
AC243960.3-201ENST00000599316 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
AC243960.3-201ENST00000599316 NACADO15069 1562 aa16.72■□□□□ 0.27
AC243960.3-201ENST00000599316 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
AC243960.3-201ENST00000599316 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
AC243960.3-201ENST00000599316 MSH5O43196 834 aa16.62■□□□□ 0.25
AC243960.3-201ENST00000599316 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
AC243960.3-201ENST00000599316 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
AC243960.3-201ENST00000599316 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
AC243960.3-201ENST00000599316 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
AC243960.3-201ENST00000599316 ADRA2BP18089 450 aa16.43■□□□□ 0.22
AC243960.3-201ENST00000599316 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
AC243960.3-201ENST00000599316 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
AC243960.3-201ENST00000599316 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
AC243960.3-201ENST00000599316 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
AC243960.3-201ENST00000599316 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
AC243960.3-201ENST00000599316 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
AC243960.3-201ENST00000599316 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
AC243960.3-201ENST00000599316 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
AC243960.3-201ENST00000599316 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
AC243960.3-201ENST00000599316 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
AC243960.3-201ENST00000599316 CUX2O14529 1486 aa15.56■□□□□ 0.08
AC243960.3-201ENST00000599316 ERCC6Q03468 1493 aa15.52■□□□□ 0.08
AC243960.3-201ENST00000599316 NCAPD3P42695 1498 aa15.43■□□□□ 0.06
AC243960.3-201ENST00000599316 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
AC243960.3-201ENST00000599316 SMARCA2P51531 1590 aa15.31■□□□□ 0.04
AC243960.3-201ENST00000599316 HMGXB3Q12766 1538 aa15.27■□□□□ 0.03
AC243960.3-201ENST00000599316 NESP48681 1621 aa15.25■□□□□ 0.03
AC243960.3-201ENST00000599316 SMARCA4P51532 1647 aa15.22■□□□□ 0.03
AC243960.3-201ENST00000599316 MAPK8IP2Q13387 824 aaPredicted RBP15.21■□□□□ 0.03
AC243960.3-201ENST00000599316 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
AC243960.3-201ENST00000599316 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
AC243960.3-201ENST00000599316 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
AC243960.3-201ENST00000599316 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
AC243960.3-201ENST00000599316 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
AC243960.3-201ENST00000599316 PDS5BQ9NTI5 1447 aa15.11■□□□□ 0.01
AC243960.3-201ENST00000599316 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
AC243960.3-201ENST00000599316 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
AC243960.3-201ENST00000599316 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
AC243960.3-201ENST00000599316 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
AC243960.3-201ENST00000599316 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
AC243960.3-201ENST00000599316 MRC2Q9UBG0 1479 aa14.94□□□□□ -0.02
AC243960.3-201ENST00000599316 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
AC243960.3-201ENST00000599316 WDR62O43379 1518 aa14.87□□□□□ -0.03
AC243960.3-201ENST00000599316 CEP164Q9UPV0 1460 aa14.83□□□□□ -0.03
AC243960.3-201ENST00000599316 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
AC243960.3-201ENST00000599316 WIZO95785 1651 aa14.79□□□□□ -0.04
AC243960.3-201ENST00000599316 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
AC243960.3-201ENST00000599316 CFTRP13569 1480 aa14.7□□□□□ -0.06
AC243960.3-201ENST00000599316 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
AC243960.3-201ENST00000599316 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
AC243960.3-201ENST00000599316 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
AC243960.3-201ENST00000599316 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
AC243960.3-201ENST00000599316 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
AC243960.3-201ENST00000599316 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
AC243960.3-201ENST00000599316 IFT140Q96RY7 1462 aa14.56□□□□□ -0.08
AC243960.3-201ENST00000599316 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
AC243960.3-201ENST00000599316 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
AC243960.3-201ENST00000599316 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
AC243960.3-201ENST00000599316 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
AC243960.3-201ENST00000599316 ARHGEF11O15085 1522 aa14.53□□□□□ -0.08
AC243960.3-201ENST00000599316 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
AC243960.3-201ENST00000599316 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
AC243960.3-201ENST00000599316 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
AC243960.3-201ENST00000599316 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
AC243960.3-201ENST00000599316 FBLN2P98095 1184 aa14.46□□□□□ -0.09
AC243960.3-201ENST00000599316 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
AC243960.3-201ENST00000599316 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
AC243960.3-201ENST00000599316 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
AC243960.3-201ENST00000599316 CHD1O14646 1710 aa14.4□□□□□ -0.1
AC243960.3-201ENST00000599316 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
AC243960.3-201ENST00000599316 DNMBPQ6XZF7 1577 aa14.38□□□□□ -0.11
AC243960.3-201ENST00000599316 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
AC243960.3-201ENST00000599316 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
AC243960.3-201ENST00000599316 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
AC243960.3-201ENST00000599316 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
AC243960.3-201ENST00000599316 SOGA1O94964 1423 aa14.28□□□□□ -0.12
AC243960.3-201ENST00000599316 POLA1P09884 1462 aaPredicted RBP14.27□□□□□ -0.12
AC243960.3-201ENST00000599316 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.12
AC243960.3-201ENST00000599316 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
AC243960.3-201ENST00000599316 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
AC243960.3-201ENST00000599316 RNF39Q9H2S5 420 aa14.22□□□□□ -0.13
AC243960.3-201ENST00000599316 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
AC243960.3-201ENST00000599316 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
AC243960.3-201ENST00000599316 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
AC243960.3-201ENST00000599316 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
AC243960.3-201ENST00000599316 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
AC243960.3-201ENST00000599316 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
AC243960.3-201ENST00000599316 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
AC243960.3-201ENST00000599316 SYNJ2O15056 1496 aa14.13□□□□□ -0.15
AC243960.3-201ENST00000599316 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms