RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 A2ML1A8K2U0 1454 aa30.75■■■□□ 2.51
IRF3-222ENST00000599144 TNRQ92752 1358 aa30.72■■■□□ 2.51
IRF3-222ENST00000599144 SPATA31D1Q6ZQQ2 1576 aa30.71■■■□□ 2.51
IRF3-222ENST00000599144 DNMT1P26358 1616 aaKnown RBP30.7■■■□□ 2.51
IRF3-222ENST00000599144 WASHC2CQ9Y4E1 1318 aa30.69■■■□□ 2.5
IRF3-222ENST00000599144 LOC105371045A0A1W2PR82 267 aa30.68■■■□□ 2.5
IRF3-222ENST00000599144 KDM5DQ9BY66 1539 aa30.66■■■□□ 2.5
IRF3-222ENST00000599144 PZPP20742 1482 aa30.64■■■□□ 2.5
IRF3-222ENST00000599144 SOCS7O14512 581 aa30.63■■■□□ 2.49
IRF3-222ENST00000599144 RSPH4AQ5TD94 716 aa30.62■■■□□ 2.49
IRF3-222ENST00000599144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.62■■■□□ 2.493e-6■□□□□ 11.3
IRF3-222ENST00000599144 TSPY4P0CV99 314 aa30.61■■■□□ 2.49
IRF3-222ENST00000599144 TSPY10P0CW01 314 aa30.61■■■□□ 2.49
IRF3-222ENST00000599144 KANK4Q5T7N3 995 aaPredicted RBP30.6■■■□□ 2.49
IRF3-222ENST00000599144 NEURL4Q96JN8 1562 aa30.59■■■□□ 2.49
IRF3-222ENST00000599144 LRRC9Q6ZRR7 1453 aa30.58■■■□□ 2.49
IRF3-222ENST00000599144 MIA2Q96PC5 1412 aa30.57■■■□□ 2.48
IRF3-222ENST00000599144 SCAF1Q9H7N4 1312 aaKnown RBP30.57■■■□□ 2.48
IRF3-222ENST00000599144 ARHGEF5Q12774 1597 aa30.57■■■□□ 2.48
IRF3-222ENST00000599144 VPS8Q8N3P4 1428 aa30.56■■■□□ 2.48
IRF3-222ENST00000599144 PIP4K2BP78356 416 aa30.55■■■□□ 2.48
IRF3-222ENST00000599144 ANKLE2Q86XL3 938 aa30.53■■■□□ 2.48
IRF3-222ENST00000599144 SHANK2Q9UPX8 1470 aa30.5■■■□□ 2.47
IRF3-222ENST00000599144 THEMISQ8N1K5 641 aaPredicted RBP30.5■■■□□ 2.47
IRF3-222ENST00000599144 FAM135AQ9P2D6 1515 aa30.5■■■□□ 2.47
IRF3-222ENST00000599144 UGGT1Q9NYU2 1555 aa30.49■■■□□ 2.47
IRF3-222ENST00000599144 POLR1AO95602 1720 aaPredicted RBP30.48■■■□□ 2.47
IRF3-222ENST00000599144 HSPA1LP34931 641 aa30.48■■■□□ 2.47
IRF3-222ENST00000599144 NLRP1Q9C000 1473 aa30.48■■■□□ 2.47
IRF3-222ENST00000599144 ABCC3O15438 1527 aa30.47■■■□□ 2.47
IRF3-222ENST00000599144 NPHP4O75161 1426 aaPredicted RBP30.47■■■□□ 2.47
IRF3-222ENST00000599144 VWDEQ8N2E2 1590 aa30.44■■■□□ 2.46
IRF3-222ENST00000599144 CPS1P31327 1500 aa30.43■■■□□ 2.46
IRF3-222ENST00000599144 MAST1Q9Y2H9 1570 aa30.42■■■□□ 2.46
IRF3-222ENST00000599144 RNF17Q9BXT8 1623 aaKnown RBP30.42■■■□□ 2.46
IRF3-222ENST00000599144 MYOM3Q5VTT5 1437 aa30.41■■■□□ 2.46
IRF3-222ENST00000599144 TOM1O60784 492 aa30.4■■■□□ 2.46
IRF3-222ENST00000599144 ERVK-7P63135 1459 aa30.39■■■□□ 2.46
IRF3-222ENST00000599144 SENP3Q9H4L4 574 aaPredicted RBP30.39■■■□□ 2.46
IRF3-222ENST00000599144 MROH1Q8NDA8 1641 aa30.39■■■□□ 2.46
IRF3-222ENST00000599144 MED14O60244 1454 aa30.38■■■□□ 2.45
IRF3-222ENST00000599144 RRP7BPQ9NSQ0 103 aa30.33■■■□□ 2.45
IRF3-222ENST00000599144 DEPDC5O75140 1603 aa30.33■■■□□ 2.45
IRF3-222ENST00000599144 MAP3K1Q13233 1512 aa30.32■■■□□ 2.44
IRF3-222ENST00000599144 EIF2AK4Q9P2K8 1649 aaKnown RBP30.31■■■□□ 2.44
IRF3-222ENST00000599144 ALKQ9UM73 1620 aa30.31■■■□□ 2.44
IRF3-222ENST00000599144 CEP152O94986 1710 aa30.3■■■□□ 2.44
IRF3-222ENST00000599144 ZC3H13Q5T200 1668 aaKnown RBP30.3■■■□□ 2.44
IRF3-222ENST00000599144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.3■■■□□ 2.445e-6■■■□□ 18.6
IRF3-222ENST00000599144 IQGAP1P46940 1657 aa30.3■■■□□ 2.44
IRF3-222ENST00000599144 KIF15Q9NS87 1388 aa30.29■■■□□ 2.44
IRF3-222ENST00000599144 DUOX2Q9NRD8 1548 aa30.29■■■□□ 2.44
IRF3-222ENST00000599144 ABCC5O15440 1437 aa30.29■■■□□ 2.44
IRF3-222ENST00000599144 LTKP29376 864 aa30.26■■■□□ 2.43
IRF3-222ENST00000599144 MED1Q15648 1581 aaPredicted RBP30.26■■■□□ 2.43
IRF3-222ENST00000599144 LRRC7Q96NW7 1537 aa30.26■■■□□ 2.43
IRF3-222ENST00000599144 STRCP1A6NGW2 1772 aa30.25■■■□□ 2.43
IRF3-222ENST00000599144 TXNDC2Q86VQ3 553 aa30.22■■■□□ 2.43
IRF3-222ENST00000599144 CHIC2Q9UKJ5 165 aa30.22■■■□□ 2.43
IRF3-222ENST00000599144 SCAF11Q99590 1463 aaKnown RBP30.2■■■□□ 2.43
IRF3-222ENST00000599144 UBR1Q8IWV7 1749 aa30.2■■■□□ 2.43
IRF3-222ENST00000599144 DAPK1P53355 1430 aa30.19■■■□□ 2.42
IRF3-222ENST00000599144 PTPN23Q9H3S7 1636 aa30.18■■■□□ 2.42
IRF3-222ENST00000599144 PRDM15P57071 1507 aaPredicted RBP30.18■■■□□ 2.42
IRF3-222ENST00000599144 ERBINQ96RT1 1412 aa30.18■■■□□ 2.42
IRF3-222ENST00000599144 CFAP65Q6ZU64 1925 aaKnown RBP30.18■■■□□ 2.42
IRF3-222ENST00000599144 APLP2Q06481 763 aa30.17■■■□□ 2.42
IRF3-222ENST00000599144 ARHGAP31Q2M1Z3 1444 aa30.16■■■□□ 2.42
IRF3-222ENST00000599144 ARHGAP23Q9P227 1491 aa30.15■■■□□ 2.42
IRF3-222ENST00000599144 CROCC2H7BZ55 1655 aa30.14■■■□□ 2.41
IRF3-222ENST00000599144 FGD6Q6ZV73 1430 aa30.13■■■□□ 2.41
IRF3-222ENST00000599144 SLIT1O75093 1534 aa30.12■■■□□ 2.41
IRF3-222ENST00000599144 PHF23Q9BUL5 403 aaPredicted RBP30.1■■■□□ 2.41
IRF3-222ENST00000599144 STAG3Q9UJ98 1225 aa30.1■■■□□ 2.41
IRF3-222ENST00000599144 PIK3C2BO00750 1634 aa30.09■■■□□ 2.41
IRF3-222ENST00000599144 SYNMO15061 1565 aa30.09■■■□□ 2.41
IRF3-222ENST00000599144 EID1Q9Y6B2 187 aa30.09■■■□□ 2.41
IRF3-222ENST00000599144 KANK1Q14678 1352 aa30.08■■■□□ 2.41
IRF3-222ENST00000599144 TMEM2Q9UHN6 1383 aa30.07■■■□□ 2.4
IRF3-222ENST00000599144 IDI1Q13907 227 aa30.07■■■□□ 2.4
IRF3-222ENST00000599144 ANKRD30AQ9BXX3 1397 aa30.05■■■□□ 2.4
IRF3-222ENST00000599144 RBM33Q96EV2 1170 aaKnown RBP30.04■■■□□ 2.4
IRF3-222ENST00000599144 SLC26A8Q96RN1 970 aa30.02■■■□□ 2.4
IRF3-222ENST00000599144 EFCAB6Q5THR3 1501 aa29.99■■■□□ 2.39
IRF3-222ENST00000599144 LMTK2Q8IWU2 1503 aa29.98■■■□□ 2.39
IRF3-222ENST00000599144 FAM50AQ14320 339 aaKnown RBP29.98■■■□□ 2.39
IRF3-222ENST00000599144 TMEM94Q12767 1356 aa29.96■■■□□ 2.39
IRF3-222ENST00000599144 NOS1P29475 1434 aa29.94■■■□□ 2.38
IRF3-222ENST00000599144 XIRP1Q702N8 1843 aaKnown RBP29.93■■■□□ 2.38
IRF3-222ENST00000599144 KCNA6P17658 529 aa29.91■■■□□ 2.38
IRF3-222ENST00000599144 BCANQ96GW7 911 aa29.91■■■□□ 2.38
IRF3-222ENST00000599144 PROSER2Q86WR7 435 aaPredicted RBP29.9■■■□□ 2.38
IRF3-222ENST00000599144 RGS17Q9UGC6 210 aaPredicted RBP29.89■■■□□ 2.38
IRF3-222ENST00000599144 ADGRL2O95490 1459 aa29.88■■■□□ 2.37
IRF3-222ENST00000599144 ADGRB3O60242 1522 aa29.88■■■□□ 2.37
IRF3-222ENST00000599144 TET3O43151 1660 aa29.88■■■□□ 2.37
IRF3-222ENST00000599144 ANKRD50Q9ULJ7 1429 aa29.85■■■□□ 2.37
IRF3-222ENST00000599144 FAM135BQ49AJ0 1406 aa29.84■■■□□ 2.37
IRF3-222ENST00000599144 SLC52A1Q9NWF4 448 aa29.83■■■□□ 2.37
IRF3-222ENST00000599144 KDM5AP29375 1690 aaKnown RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms