RNA–Protein interactions for RNA: ENST00000598166.2

LTBP4-220, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-220ENST00000598166 MYO3AQ8NEV4 1616 aa23.73■■□□□ 1.39
LTBP4-220ENST00000598166 FGD6Q6ZV73 1430 aa23.73■■□□□ 1.39
LTBP4-220ENST00000598166 CEP170BQ9Y4F5 1589 aaPredicted RBP23.73■■□□□ 1.39
LTBP4-220ENST00000598166 ZNF142P52746 1687 aaPredicted RBP23.72■■□□□ 1.39
LTBP4-220ENST00000598166 INO80Q9ULG1 1556 aaPredicted RBP23.71■■□□□ 1.39
LTBP4-220ENST00000598166 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
LTBP4-220ENST00000598166 PTPN23Q9H3S7 1636 aa23.7■■□□□ 1.38
LTBP4-220ENST00000598166 CCDC141Q6ZP82 1450 aa23.69■■□□□ 1.38
LTBP4-220ENST00000598166 ARHGEF5Q12774 1597 aa23.66■■□□□ 1.38
LTBP4-220ENST00000598166 HSPA1LP34931 641 aa23.65■■□□□ 1.38
LTBP4-220ENST00000598166 A2ML1A8K2U0 1454 aa23.64■■□□□ 1.38
LTBP4-220ENST00000598166 FBXO31Q5XUX0 539 aaPredicted RBP23.63■■□□□ 1.37
LTBP4-220ENST00000598166 DNMT1P26358 1616 aaKnown RBP23.62■■□□□ 1.37
LTBP4-220ENST00000598166 PIP4K2BP78356 416 aa23.61■■□□□ 1.37
LTBP4-220ENST00000598166 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
LTBP4-220ENST00000598166 RSPH4AQ5TD94 716 aa23.59■■□□□ 1.37
LTBP4-220ENST00000598166 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
LTBP4-220ENST00000598166 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.37
LTBP4-220ENST00000598166 RTEL1-TNFRSF6BF6WH68 1400 aa23.58■■□□□ 1.36
LTBP4-220ENST00000598166 TOM1O60784 492 aa23.57■■□□□ 1.36
LTBP4-220ENST00000598166 ABCC5O15440 1437 aa23.57■■□□□ 1.36
LTBP4-220ENST00000598166 ADGBQ8N7X0 1667 aa23.57■■□□□ 1.36
LTBP4-220ENST00000598166 DAPK1P53355 1430 aa23.56■■□□□ 1.36
LTBP4-220ENST00000598166 NEURL4Q96JN8 1562 aa23.56■■□□□ 1.36
LTBP4-220ENST00000598166 SHANK2Q9UPX8 1470 aa23.56■■□□□ 1.36
LTBP4-220ENST00000598166 TNRQ92752 1358 aa23.55■■□□□ 1.36
LTBP4-220ENST00000598166 TSPY4P0CV99 314 aa23.55■■□□□ 1.36
LTBP4-220ENST00000598166 TSPY10P0CW01 314 aa23.55■■□□□ 1.36
LTBP4-220ENST00000598166 KIF3BO15066 747 aa23.54■■□□□ 1.36
LTBP4-220ENST00000598166 CPS1P31327 1500 aa23.54■■□□□ 1.36
LTBP4-220ENST00000598166 MED1Q15648 1581 aaPredicted RBP23.53■■□□□ 1.36
LTBP4-220ENST00000598166 MAST1Q9Y2H9 1570 aa23.53■■□□□ 1.36
LTBP4-220ENST00000598166 CROCC2H7BZ55 1655 aa23.52■■□□□ 1.36
LTBP4-220ENST00000598166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
LTBP4-220ENST00000598166 ANKLE2Q86XL3 938 aa23.51■■□□□ 1.35
LTBP4-220ENST00000598166 PZPP20742 1482 aa23.49■■□□□ 1.35
LTBP4-220ENST00000598166 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
LTBP4-220ENST00000598166 WASHC2CQ9Y4E1 1318 aa23.48■■□□□ 1.35
LTBP4-220ENST00000598166 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
LTBP4-220ENST00000598166 VWDEQ8N2E2 1590 aa23.47■■□□□ 1.35
LTBP4-220ENST00000598166 POLR1AO95602 1720 aaPredicted RBP23.46■■□□□ 1.35
LTBP4-220ENST00000598166 ALKQ9UM73 1620 aa23.46■■□□□ 1.35
LTBP4-220ENST00000598166 RRBP1Q9P2E9 1410 aaKnown RBP23.45■■□□□ 1.34
LTBP4-220ENST00000598166 KDM5DQ9BY66 1539 aa23.44■■□□□ 1.34
LTBP4-220ENST00000598166 MED14O60244 1454 aa23.43■■□□□ 1.34
LTBP4-220ENST00000598166 NPHP4O75161 1426 aaPredicted RBP23.42■■□□□ 1.34
LTBP4-220ENST00000598166 KIF15Q9NS87 1388 aa23.41■■□□□ 1.34
LTBP4-220ENST00000598166 ITGAEP38570 1179 aa23.41■■□□□ 1.34
LTBP4-220ENST00000598166 RRP7BPQ9NSQ0 103 aa23.41■■□□□ 1.34
LTBP4-220ENST00000598166 NLRP1Q9C000 1473 aa23.41■■□□□ 1.34
LTBP4-220ENST00000598166 FAM135AQ9P2D6 1515 aa23.4■■□□□ 1.34
LTBP4-220ENST00000598166 UGGT1Q9NYU2 1555 aa23.4■■□□□ 1.34
LTBP4-220ENST00000598166 ANKRD30AQ9BXX3 1397 aa23.38■■□□□ 1.33
LTBP4-220ENST00000598166 ADGRL2O95490 1459 aa23.37■■□□□ 1.33
LTBP4-220ENST00000598166 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
LTBP4-220ENST00000598166 DUOX2Q9NRD8 1548 aa23.37■■□□□ 1.33
LTBP4-220ENST00000598166 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
LTBP4-220ENST00000598166 LRRC7Q96NW7 1537 aa23.34■■□□□ 1.33
LTBP4-220ENST00000598166 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
LTBP4-220ENST00000598166 STRCP1A6NGW2 1772 aa23.31■■□□□ 1.32
LTBP4-220ENST00000598166 ERBINQ96RT1 1412 aa23.31■■□□□ 1.32
LTBP4-220ENST00000598166 IQGAP1P46940 1657 aa23.3■■□□□ 1.32
LTBP4-220ENST00000598166 EIF2AK4Q9P2K8 1649 aaKnown RBP23.3■■□□□ 1.32
LTBP4-220ENST00000598166 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
LTBP4-220ENST00000598166 ROCK1Q13464 1354 aa23.27■■□□□ 1.32
LTBP4-220ENST00000598166 RNF17Q9BXT8 1623 aaKnown RBP23.27■■□□□ 1.32
LTBP4-220ENST00000598166 ABCC3O15438 1527 aa23.27■■□□□ 1.32
LTBP4-220ENST00000598166 MROH1Q8NDA8 1641 aa23.25■■□□□ 1.31
LTBP4-220ENST00000598166 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
LTBP4-220ENST00000598166 ANKRD50Q9ULJ7 1429 aa23.24■■□□□ 1.31
LTBP4-220ENST00000598166 LTKP29376 864 aa23.23■■□□□ 1.31
LTBP4-220ENST00000598166 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
LTBP4-220ENST00000598166 SYNMO15061 1565 aa23.19■■□□□ 1.3
LTBP4-220ENST00000598166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.19■■□□□ 1.3
LTBP4-220ENST00000598166 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-220ENST00000598166 SCAF11Q99590 1463 aaKnown RBP23.18■■□□□ 1.3
LTBP4-220ENST00000598166 TXNDC2Q86VQ3 553 aa23.18■■□□□ 1.3
LTBP4-220ENST00000598166 ARHGAP23Q9P227 1491 aa23.16■■□□□ 1.3
LTBP4-220ENST00000598166 UBR1Q8IWV7 1749 aa23.16■■□□□ 1.3
LTBP4-220ENST00000598166 NAIPQ13075 1403 aa23.13■■□□□ 1.29
LTBP4-220ENST00000598166 CEP152O94986 1710 aa23.13■■□□□ 1.29
LTBP4-220ENST00000598166 SLIT1O75093 1534 aa23.13■■□□□ 1.29
LTBP4-220ENST00000598166 KANK1Q14678 1352 aa23.11■■□□□ 1.29
LTBP4-220ENST00000598166 HFM1A2PYH4 1435 aa23.09■■□□□ 1.29
LTBP4-220ENST00000598166 FAM135BQ49AJ0 1406 aa23.09■■□□□ 1.29
LTBP4-220ENST00000598166 POTEAQ6S8J7 498 aa23.09■■□□□ 1.29
LTBP4-220ENST00000598166 XIRP1Q702N8 1843 aaKnown RBP23.09■■□□□ 1.29
LTBP4-220ENST00000598166 UNC13BO14795 1591 aa23.09■■□□□ 1.29
LTBP4-220ENST00000598166 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
LTBP4-220ENST00000598166 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.29
LTBP4-220ENST00000598166 EID1Q9Y6B2 187 aa23.08■■□□□ 1.29
LTBP4-220ENST00000598166 CFAP65Q6ZU64 1925 aaKnown RBP23.07■■□□□ 1.28
LTBP4-220ENST00000598166 TMEM2Q9UHN6 1383 aa23.05■■□□□ 1.28
LTBP4-220ENST00000598166 LMTK2Q8IWU2 1503 aa23.05■■□□□ 1.28
LTBP4-220ENST00000598166 TMEM94Q12767 1356 aa23.04■■□□□ 1.28
LTBP4-220ENST00000598166 KCNA6P17658 529 aa23.02■■□□□ 1.28
LTBP4-220ENST00000598166 RBM33Q96EV2 1170 aaKnown RBP23.02■■□□□ 1.28
LTBP4-220ENST00000598166 IDI1Q13907 227 aa23.01■■□□□ 1.27
LTBP4-220ENST00000598166 NUP155O75694 1391 aa23.01■■□□□ 1.27
LTBP4-220ENST00000598166 EFCAB6Q5THR3 1501 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms