RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 TSPY4P0CV99 314 aa20.97■□□□□ 0.95
APOC1-209ENST00000592885 TSPY10P0CW01 314 aa20.97■□□□□ 0.95
APOC1-209ENST00000592885 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
APOC1-209ENST00000592885 RNF17Q9BXT8 1623 aaKnown RBP20.96■□□□□ 0.95
APOC1-209ENST00000592885 ZC3H13Q5T200 1668 aaKnown RBP20.94■□□□□ 0.94
APOC1-209ENST00000592885 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
APOC1-209ENST00000592885 PZPP20742 1482 aa20.94■□□□□ 0.94
APOC1-209ENST00000592885 KIF3BO15066 747 aa20.93■□□□□ 0.94
APOC1-209ENST00000592885 A2ML1A8K2U0 1454 aa20.92■□□□□ 0.94
APOC1-209ENST00000592885 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
APOC1-209ENST00000592885 TCOF1Q13428 1488 aaKnown RBP20.9■□□□□ 0.94
APOC1-209ENST00000592885 SHANK2Q9UPX8 1470 aa20.9■□□□□ 0.94
APOC1-209ENST00000592885 IQSEC2Q5JU85 1478 aa20.89■□□□□ 0.94
APOC1-209ENST00000592885 DNMT1P26358 1616 aaKnown RBP20.89■□□□□ 0.93
APOC1-209ENST00000592885 LTBP4Q8N2S1 1624 aa20.89■□□□□ 0.93
APOC1-209ENST00000592885 APLP2Q06481 763 aa20.88■□□□□ 0.93
APOC1-209ENST00000592885 PTPN23Q9H3S7 1636 aa20.88■□□□□ 0.93
APOC1-209ENST00000592885 PKD2Q13563 968 aa20.87■□□□□ 0.93
APOC1-209ENST00000592885 DUOX2Q9NRD8 1548 aa20.87■□□□□ 0.93
APOC1-209ENST00000592885 WASHC2CQ9Y4E1 1318 aa20.86■□□□□ 0.93
APOC1-209ENST00000592885 TNRQ92752 1358 aa20.85■□□□□ 0.93
APOC1-209ENST00000592885 POLR1AO95602 1720 aaPredicted RBP20.85■□□□□ 0.93
APOC1-209ENST00000592885 MROH1Q8NDA8 1641 aa20.85■□□□□ 0.93
APOC1-209ENST00000592885 ABCC3O15438 1527 aa20.84■□□□□ 0.93
APOC1-209ENST00000592885 NLRP1Q9C000 1473 aa20.83■□□□□ 0.93
APOC1-209ENST00000592885 FGD6Q6ZV73 1430 aa20.82■□□□□ 0.92
APOC1-209ENST00000592885 ERBINQ96RT1 1412 aa20.81■□□□□ 0.92
APOC1-209ENST00000592885 SPATA31D1Q6ZQQ2 1576 aa20.8■□□□□ 0.92
APOC1-209ENST00000592885 PRDM15P57071 1507 aaPredicted RBP20.8■□□□□ 0.92
APOC1-209ENST00000592885 NCKAP5LQ9HCH0 1330 aa20.79■□□□□ 0.92
APOC1-209ENST00000592885 ABCC5O15440 1437 aa20.79■□□□□ 0.92
APOC1-209ENST00000592885 DAPK1P53355 1430 aa20.78■□□□□ 0.92
APOC1-209ENST00000592885 CEP152O94986 1710 aa20.78■□□□□ 0.92
APOC1-209ENST00000592885 KIF15Q9NS87 1388 aa20.78■□□□□ 0.92
APOC1-209ENST00000592885 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
APOC1-209ENST00000592885 DEPDC5O75140 1603 aa20.77■□□□□ 0.92
APOC1-209ENST00000592885 NEURL4Q96JN8 1562 aa20.76■□□□□ 0.91
APOC1-209ENST00000592885 UGGT1Q9NYU2 1555 aa20.76■□□□□ 0.91
APOC1-209ENST00000592885 ERVK-7P63135 1459 aa20.75■□□□□ 0.91
APOC1-209ENST00000592885 ARHGAP31Q2M1Z3 1444 aa20.71■□□□□ 0.91
APOC1-209ENST00000592885 ZNF335Q9H4Z2 1342 aaPredicted RBP20.71■□□□□ 0.91
APOC1-209ENST00000592885 THEMISQ8N1K5 641 aaPredicted RBP20.7■□□□□ 0.9
APOC1-209ENST00000592885 ANKRD30AQ9BXX3 1397 aa20.7■□□□□ 0.9
APOC1-209ENST00000592885 MED14O60244 1454 aa20.69■□□□□ 0.9
APOC1-209ENST00000592885 ADGRL2O95490 1459 aa20.69■□□□□ 0.9
APOC1-209ENST00000592885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
APOC1-209ENST00000592885 CPS1P31327 1500 aa20.68■□□□□ 0.9
APOC1-209ENST00000592885 ANKLE2Q86XL3 938 aa20.67■□□□□ 0.9
APOC1-209ENST00000592885 LMTK2Q8IWU2 1503 aa20.67■□□□□ 0.9
APOC1-209ENST00000592885 UBR1Q8IWV7 1749 aa20.67■□□□□ 0.9
APOC1-209ENST00000592885 RRP7BPQ9NSQ0 103 aa20.66■□□□□ 0.9
APOC1-209ENST00000592885 VWDEQ8N2E2 1590 aa20.66■□□□□ 0.9
APOC1-209ENST00000592885 IQGAP1P46940 1657 aa20.66■□□□□ 0.9
APOC1-209ENST00000592885 KANK1Q14678 1352 aa20.65■□□□□ 0.9
APOC1-209ENST00000592885 NPHP4O75161 1426 aaPredicted RBP20.64■□□□□ 0.89
APOC1-209ENST00000592885 KDM5AP29375 1690 aaKnown RBP20.61■□□□□ 0.89
APOC1-209ENST00000592885 CFAP65Q6ZU64 1925 aaKnown RBP20.61■□□□□ 0.89
APOC1-209ENST00000592885 SLIT1O75093 1534 aa20.59■□□□□ 0.89
APOC1-209ENST00000592885 EFCAB6Q5THR3 1501 aa20.59■□□□□ 0.89
APOC1-209ENST00000592885 ARHGAP23Q9P227 1491 aa20.58■□□□□ 0.89
APOC1-209ENST00000592885 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
APOC1-209ENST00000592885 PIK3C2BO00750 1634 aa20.56■□□□□ 0.88
APOC1-209ENST00000592885 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
APOC1-209ENST00000592885 SYNMO15061 1565 aa20.56■□□□□ 0.88
APOC1-209ENST00000592885 UBAP1LF5GYI3 381 aa20.54■□□□□ 0.88
APOC1-209ENST00000592885 FAM50AQ14320 339 aaKnown RBP20.54■□□□□ 0.88
APOC1-209ENST00000592885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.54■□□□□ 0.881e-9■□□□□ 10.7
APOC1-209ENST00000592885 ANKRD50Q9ULJ7 1429 aa20.53■□□□□ 0.88
APOC1-209ENST00000592885 RPRD2Q5VT52 1461 aaKnown RBP20.53■□□□□ 0.88
APOC1-209ENST00000592885 TET3O43151 1660 aa20.51■□□□□ 0.87
APOC1-209ENST00000592885 UNC13BO14795 1591 aa20.51■□□□□ 0.87
APOC1-209ENST00000592885 NOS1P29475 1434 aa20.51■□□□□ 0.87
APOC1-209ENST00000592885 STRCP1A6NGW2 1772 aa20.49■□□□□ 0.87
APOC1-209ENST00000592885 ROCK1Q13464 1354 aa20.49■□□□□ 0.87
APOC1-209ENST00000592885 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
APOC1-209ENST00000592885 GCC2Q8IWJ2 1684 aa20.49■□□□□ 0.87
APOC1-209ENST00000592885 TMEM2Q9UHN6 1383 aa20.47■□□□□ 0.87
APOC1-209ENST00000592885 TOM1O60784 492 aa20.46■□□□□ 0.87
APOC1-209ENST00000592885 EID1Q9Y6B2 187 aa20.46■□□□□ 0.87
APOC1-209ENST00000592885 LRRC7Q96NW7 1537 aa20.45■□□□□ 0.86
APOC1-209ENST00000592885 TXNDC2Q86VQ3 553 aa20.44■□□□□ 0.86
APOC1-209ENST00000592885 DISP3Q9P2K9 1392 aa20.44■□□□□ 0.86
APOC1-209ENST00000592885 LTKP29376 864 aa20.43■□□□□ 0.86
APOC1-209ENST00000592885 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
APOC1-209ENST00000592885 IQGAP3Q86VI3 1631 aa20.42■□□□□ 0.86
APOC1-209ENST00000592885 SLC52A1Q9NWF4 448 aa20.42■□□□□ 0.86
APOC1-209ENST00000592885 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
APOC1-209ENST00000592885 IDI1Q13907 227 aa20.41■□□□□ 0.86
APOC1-209ENST00000592885 E9PCH4 1651 aa20.38■□□□□ 0.85
APOC1-209ENST00000592885 TMEM131LA2VDJ0 1609 aa20.35■□□□□ 0.85
APOC1-209ENST00000592885 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
APOC1-209ENST00000592885 XIRP1Q702N8 1843 aaKnown RBP20.35■□□□□ 0.85
APOC1-209ENST00000592885 MYO5BQ9ULV0 1848 aa20.34■□□□□ 0.85
APOC1-209ENST00000592885 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
APOC1-209ENST00000592885 PIP4K2BP78356 416 aa20.34■□□□□ 0.85
APOC1-209ENST00000592885 ZFYVE9O95405 1425 aa20.33■□□□□ 0.84
APOC1-209ENST00000592885 NKTRP30414 1462 aaKnown RBP20.31■□□□□ 0.84
APOC1-209ENST00000592885 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
APOC1-209ENST00000592885 HSPA1LP34931 641 aa20.3■□□□□ 0.84
APOC1-209ENST00000592885 PLEKHG1Q9ULL1 1385 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms