RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1
CAPNS1-213ENST00000592354 MIA2Q96PC5 1412 aa21.31■■□□□ 1
CAPNS1-213ENST00000592354 EIF2AK4Q9P2K8 1649 aaKnown RBP21.31■■□□□ 1
CAPNS1-213ENST00000592354 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
CAPNS1-213ENST00000592354 DNMT1P26358 1616 aaKnown RBP21.3■■□□□ 1
CAPNS1-213ENST00000592354 LTBP4Q8N2S1 1624 aa21.3■■□□□ 1
CAPNS1-213ENST00000592354 PTPN23Q9H3S7 1636 aa21.29■■□□□ 1
CAPNS1-213ENST00000592354 ZC3H13Q5T200 1668 aaKnown RBP21.29■■□□□ 1
CAPNS1-213ENST00000592354 PZPP20742 1482 aa21.29■■□□□ 1
CAPNS1-213ENST00000592354 PLA2R1Q13018 1463 aa21.29■■□□□ 1
CAPNS1-213ENST00000592354 TSPY4P0CV99 314 aa21.29■■□□□ 1
CAPNS1-213ENST00000592354 TSPY10P0CW01 314 aa21.29■■□□□ 1
CAPNS1-213ENST00000592354 POLR1AO95602 1720 aaPredicted RBP21.29■■□□□ 1
CAPNS1-213ENST00000592354 NCKAP5LQ9HCH0 1330 aa21.28■■□□□ 1
CAPNS1-213ENST00000592354 A2ML1A8K2U0 1454 aa21.27■■□□□ 1
CAPNS1-213ENST00000592354 CEP152O94986 1710 aa21.27■■□□□ 1
CAPNS1-213ENST00000592354 MROH1Q8NDA8 1641 aa21.27■■□□□ 1
CAPNS1-213ENST00000592354 TCOF1Q13428 1488 aaKnown RBP21.26■□□□□ 0.99
CAPNS1-213ENST00000592354 WASHC2CQ9Y4E1 1318 aa21.25■□□□□ 0.99
CAPNS1-213ENST00000592354 ABCC3O15438 1527 aa21.24■□□□□ 0.99
CAPNS1-213ENST00000592354 TNRQ92752 1358 aa21.24■□□□□ 0.99
CAPNS1-213ENST00000592354 FBXO31Q5XUX0 539 aaPredicted RBP21.24■□□□□ 0.99
CAPNS1-213ENST00000592354 APLP2Q06481 763 aa21.22■□□□□ 0.99
CAPNS1-213ENST00000592354 DUOX2Q9NRD8 1548 aa21.22■□□□□ 0.99
CAPNS1-213ENST00000592354 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
CAPNS1-213ENST00000592354 NEURL4Q96JN8 1562 aa21.2■□□□□ 0.98
CAPNS1-213ENST00000592354 ABCC5O15440 1437 aa21.19■□□□□ 0.98
CAPNS1-213ENST00000592354 FGD6Q6ZV73 1430 aa21.19■□□□□ 0.98
CAPNS1-213ENST00000592354 ZNF335Q9H4Z2 1342 aaPredicted RBP21.18■□□□□ 0.98
CAPNS1-213ENST00000592354 PKD2Q13563 968 aa21.17■□□□□ 0.98
CAPNS1-213ENST00000592354 DAPK1P53355 1430 aa21.17■□□□□ 0.98
CAPNS1-213ENST00000592354 PRDM15P57071 1507 aaPredicted RBP21.17■□□□□ 0.98
CAPNS1-213ENST00000592354 SPATA31D1Q6ZQQ2 1576 aa21.17■□□□□ 0.98
CAPNS1-213ENST00000592354 UGGT1Q9NYU2 1555 aa21.16■□□□□ 0.98
CAPNS1-213ENST00000592354 IQSEC2Q5JU85 1478 aa21.16■□□□□ 0.98
CAPNS1-213ENST00000592354 NLRP1Q9C000 1473 aa21.16■□□□□ 0.98
CAPNS1-213ENST00000592354 KIF15Q9NS87 1388 aa21.16■□□□□ 0.98
CAPNS1-213ENST00000592354 ERVK-7P63135 1459 aa21.14■□□□□ 0.98
CAPNS1-213ENST00000592354 DEPDC5O75140 1603 aa21.14■□□□□ 0.97
CAPNS1-213ENST00000592354 CFAP65Q6ZU64 1925 aaKnown RBP21.14■□□□□ 0.97
CAPNS1-213ENST00000592354 ERBINQ96RT1 1412 aa21.13■□□□□ 0.97
CAPNS1-213ENST00000592354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.97
CAPNS1-213ENST00000592354 RRP7BPQ9NSQ0 103 aa21.1■□□□□ 0.97
CAPNS1-213ENST00000592354 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
CAPNS1-213ENST00000592354 IQGAP1P46940 1657 aa21.09■□□□□ 0.97
CAPNS1-213ENST00000592354 CHIC2Q9UKJ5 165 aa21.04■□□□□ 0.96
CAPNS1-213ENST00000592354 VWDEQ8N2E2 1590 aa21.04■□□□□ 0.96
CAPNS1-213ENST00000592354 ANKRD30AQ9BXX3 1397 aa21.03■□□□□ 0.96
CAPNS1-213ENST00000592354 THEMISQ8N1K5 641 aaPredicted RBP21.03■□□□□ 0.96
CAPNS1-213ENST00000592354 NPHP4O75161 1426 aaPredicted RBP21.03■□□□□ 0.96
CAPNS1-213ENST00000592354 MED14O60244 1454 aa21.02■□□□□ 0.96
CAPNS1-213ENST00000592354 ANKLE2Q86XL3 938 aa21.02■□□□□ 0.96
CAPNS1-213ENST00000592354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.02■□□□□ 0.96
CAPNS1-213ENST00000592354 PIK3C2BO00750 1634 aa21.02■□□□□ 0.96
CAPNS1-213ENST00000592354 CPS1P31327 1500 aa21.01■□□□□ 0.95
CAPNS1-213ENST00000592354 ADGRL2O95490 1459 aa21.01■□□□□ 0.95
CAPNS1-213ENST00000592354 ARHGAP31Q2M1Z3 1444 aa21■□□□□ 0.95
CAPNS1-213ENST00000592354 FAM50AQ14320 339 aaKnown RBP20.99■□□□□ 0.95
CAPNS1-213ENST00000592354 STRCP1A6NGW2 1772 aa20.99■□□□□ 0.95
CAPNS1-213ENST00000592354 KANK1Q14678 1352 aa20.98■□□□□ 0.95
CAPNS1-213ENST00000592354 UBAP1LF5GYI3 381 aa20.98■□□□□ 0.95
CAPNS1-213ENST00000592354 EFCAB6Q5THR3 1501 aa20.97■□□□□ 0.95
CAPNS1-213ENST00000592354 LMTK2Q8IWU2 1503 aa20.97■□□□□ 0.95
CAPNS1-213ENST00000592354 SYNMO15061 1565 aa20.96■□□□□ 0.95
CAPNS1-213ENST00000592354 SCAF11Q99590 1463 aaKnown RBP20.94■□□□□ 0.94
CAPNS1-213ENST00000592354 SLIT1O75093 1534 aa20.94■□□□□ 0.94
CAPNS1-213ENST00000592354 DISP3Q9P2K9 1392 aa20.92■□□□□ 0.94
CAPNS1-213ENST00000592354 ARHGAP23Q9P227 1491 aa20.92■□□□□ 0.94
CAPNS1-213ENST00000592354 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
CAPNS1-213ENST00000592354 UNC13BO14795 1591 aa20.89■□□□□ 0.94
CAPNS1-213ENST00000592354 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.94
CAPNS1-213ENST00000592354 TET3O43151 1660 aa20.89■□□□□ 0.93
CAPNS1-213ENST00000592354 GCC2Q8IWJ2 1684 aa20.88■□□□□ 0.93
CAPNS1-213ENST00000592354 ADGRB3O60242 1522 aa20.88■□□□□ 0.93
CAPNS1-213ENST00000592354 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
CAPNS1-213ENST00000592354 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
CAPNS1-213ENST00000592354 LRRC7Q96NW7 1537 aa20.85■□□□□ 0.93
CAPNS1-213ENST00000592354 LTKP29376 864 aa20.85■□□□□ 0.93
CAPNS1-213ENST00000592354 NOS1P29475 1434 aa20.85■□□□□ 0.93
CAPNS1-213ENST00000592354 MYO5BQ9ULV0 1848 aa20.85■□□□□ 0.93
CAPNS1-213ENST00000592354 PIP4K2BP78356 416 aa20.84■□□□□ 0.93
CAPNS1-213ENST00000592354 TMEM2Q9UHN6 1383 aa20.84■□□□□ 0.93
CAPNS1-213ENST00000592354 TXNDC2Q86VQ3 553 aa20.83■□□□□ 0.93
CAPNS1-213ENST00000592354 STAG3Q9UJ98 1225 aa20.83■□□□□ 0.93
CAPNS1-213ENST00000592354 XIRP1Q702N8 1843 aaKnown RBP20.83■□□□□ 0.92
CAPNS1-213ENST00000592354 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
CAPNS1-213ENST00000592354 RPRD2Q5VT52 1461 aaKnown RBP20.81■□□□□ 0.92
CAPNS1-213ENST00000592354 E9PCH4 1651 aa20.81■□□□□ 0.92
CAPNS1-213ENST00000592354 TOM1O60784 492 aa20.8■□□□□ 0.92
CAPNS1-213ENST00000592354 IDI1Q13907 227 aa20.8■□□□□ 0.92
CAPNS1-213ENST00000592354 IQGAP3Q86VI3 1631 aa20.79■□□□□ 0.92
CAPNS1-213ENST00000592354 EID1Q9Y6B2 187 aa20.79■□□□□ 0.92
CAPNS1-213ENST00000592354 ILDR2Q71H61 639 aa20.78■□□□□ 0.92
CAPNS1-213ENST00000592354 ROCK1Q13464 1354 aa20.77■□□□□ 0.92
CAPNS1-213ENST00000592354 HSPA1LP34931 641 aa20.76■□□□□ 0.91
CAPNS1-213ENST00000592354 ITGAEP38570 1179 aa20.76■□□□□ 0.91
CAPNS1-213ENST00000592354 TMEM131LA2VDJ0 1609 aa20.75■□□□□ 0.91
CAPNS1-213ENST00000592354 MED1Q15648 1581 aaPredicted RBP20.74■□□□□ 0.91
CAPNS1-213ENST00000592354 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
CAPNS1-213ENST00000592354 SLC52A1Q9NWF4 448 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms