RNA–Protein interactions for RNA: ENST00000591436.5

TMC6-218, Transcript of transmembrane channel like 6, humanhuman

TSL 1 (best) BASIC

Gene TMC6, Length 1,155 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-218ENST00000591436 PTPN23Q9H3S7 1636 aa35.44■■■■□ 3.26
TMC6-218ENST00000591436 FAM135AQ9P2D6 1515 aa35.44■■■■□ 3.26
TMC6-218ENST00000591436 CERKQ8TCT0 537 aa35.43■■■■□ 3.26
TMC6-218ENST00000591436 ZNF142P52746 1687 aaPredicted RBP35.42■■■■□ 3.26
TMC6-218ENST00000591436 PTPRTO14522 1441 aa35.41■■■■□ 3.26
TMC6-218ENST00000591436 CEP170BQ9Y4F5 1589 aaPredicted RBP35.4■■■■□ 3.26
TMC6-218ENST00000591436 FGD6Q6ZV73 1430 aa35.38■■■■□ 3.25
TMC6-218ENST00000591436 PZPP20742 1482 aa35.36■■■■□ 3.25
TMC6-218ENST00000591436 FBXO31Q5XUX0 539 aaPredicted RBP35.36■■■■□ 3.25
TMC6-218ENST00000591436 CROCC2H7BZ55 1655 aa35.36■■■■□ 3.25
TMC6-218ENST00000591436 RNF17Q9BXT8 1623 aaKnown RBP35.35■■■■□ 3.25
TMC6-218ENST00000591436 ABCC5O15440 1437 aa35.35■■■■□ 3.25
TMC6-218ENST00000591436 EIF2AK4Q9P2K8 1649 aaKnown RBP35.35■■■■□ 3.25
TMC6-218ENST00000591436 SHANK2Q9UPX8 1470 aa35.33■■■■□ 3.25
TMC6-218ENST00000591436 DUOX2Q9NRD8 1548 aa35.32■■■■□ 3.25
TMC6-218ENST00000591436 TNRQ92752 1358 aa35.32■■■■□ 3.24
TMC6-218ENST00000591436 NCKAP5LQ9HCH0 1330 aa35.32■■■■□ 3.24
TMC6-218ENST00000591436 TCOF1Q13428 1488 aaKnown RBP35.31■■■■□ 3.24
TMC6-218ENST00000591436 A2ML1A8K2U0 1454 aa35.3■■■■□ 3.24
TMC6-218ENST00000591436 DAPK1P53355 1430 aa35.3■■■■□ 3.24
TMC6-218ENST00000591436 KIF15Q9NS87 1388 aa35.29■■■■□ 3.24
TMC6-218ENST00000591436 PLA2R1Q13018 1463 aa35.29■■■■□ 3.24
TMC6-218ENST00000591436 DNMT1P26358 1616 aaKnown RBP35.28■■■■□ 3.24
TMC6-218ENST00000591436 RRP7BPQ9NSQ0 103 aa35.27■■■■□ 3.24
TMC6-218ENST00000591436 ABCC3O15438 1527 aa35.27■■■■□ 3.24
TMC6-218ENST00000591436 ZC3H13Q5T200 1668 aaKnown RBP35.26■■■■□ 3.23
TMC6-218ENST00000591436 PKD2Q13563 968 aa35.25■■■■□ 3.23
TMC6-218ENST00000591436 MROH1Q8NDA8 1641 aa35.24■■■■□ 3.23
TMC6-218ENST00000591436 CHIC2Q9UKJ5 165 aa35.2■■■■□ 3.23
TMC6-218ENST00000591436 ERBINQ96RT1 1412 aa35.2■■■■□ 3.23
TMC6-218ENST00000591436 CEP152O94986 1710 aa35.19■■■■□ 3.22
TMC6-218ENST00000591436 ANKRD30AQ9BXX3 1397 aa35.16■■■■□ 3.22
TMC6-218ENST00000591436 FAM50AQ14320 339 aaKnown RBP35.16■■■■□ 3.22
TMC6-218ENST00000591436 LTBP4Q8N2S1 1624 aa35.15■■■■□ 3.22
TMC6-218ENST00000591436 NLRP1Q9C000 1473 aa35.15■■■■□ 3.22
TMC6-218ENST00000591436 CFAP65Q6ZU64 1925 aaKnown RBP35.14■■■■□ 3.22
TMC6-218ENST00000591436 PRDM15P57071 1507 aaPredicted RBP35.11■■■■□ 3.21
TMC6-218ENST00000591436 SPATA31D1Q6ZQQ2 1576 aa35.11■■■■□ 3.21
TMC6-218ENST00000591436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.1■■■■□ 3.212e-8■■■■■ 26.8
TMC6-218ENST00000591436 ERVK-7P63135 1459 aa35.09■■■■□ 3.21
TMC6-218ENST00000591436 THEMISQ8N1K5 641 aaPredicted RBP35.09■■■■□ 3.21
TMC6-218ENST00000591436 POLR1AO95602 1720 aaPredicted RBP35.09■■■■□ 3.21
TMC6-218ENST00000591436 UGGT1Q9NYU2 1555 aa35.08■■■■□ 3.21
TMC6-218ENST00000591436 ZNF335Q9H4Z2 1342 aaPredicted RBP35.07■■■■□ 3.21
TMC6-218ENST00000591436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.06■■■■□ 3.23e-7■■■■■ 27
TMC6-218ENST00000591436 DEPDC5O75140 1603 aa35.06■■■■□ 3.2
TMC6-218ENST00000591436 KANK1Q14678 1352 aa35.04■■■■□ 3.2
TMC6-218ENST00000591436 ANKLE2Q86XL3 938 aa35.03■■■■□ 3.2
TMC6-218ENST00000591436 ADGRL2O95490 1459 aa35.03■■■■□ 3.2
TMC6-218ENST00000591436 NEURL4Q96JN8 1562 aa35■■■■□ 3.19
TMC6-218ENST00000591436 ARHGAP31Q2M1Z3 1444 aa34.99■■■■□ 3.19
TMC6-218ENST00000591436 IQSEC2Q5JU85 1478 aa34.98■■■■□ 3.19
TMC6-218ENST00000591436 PPARGC1BQ86YN6 1023 aaKnown RBP34.92■■■■□ 3.18
TMC6-218ENST00000591436 VWDEQ8N2E2 1590 aa34.91■■■■□ 3.18
TMC6-218ENST00000591436 LMTK2Q8IWU2 1503 aa34.9■■■■□ 3.18
TMC6-218ENST00000591436 NPHP4O75161 1426 aaPredicted RBP34.89■■■■□ 3.18
TMC6-218ENST00000591436 ANKRD50Q9ULJ7 1429 aa34.89■■■■□ 3.18
TMC6-218ENST00000591436 UBR1Q8IWV7 1749 aa34.89■■■■□ 3.18
TMC6-218ENST00000591436 MED14O60244 1454 aa34.87■■■■□ 3.17
TMC6-218ENST00000591436 IQGAP1P46940 1657 aa34.83■■■■□ 3.17
TMC6-218ENST00000591436 EFCAB6Q5THR3 1501 aa34.81■■■■□ 3.16
TMC6-218ENST00000591436 PIK3C2BO00750 1634 aa34.79■■■■□ 3.16
TMC6-218ENST00000591436 CPS1P31327 1500 aa34.78■■■■□ 3.16
TMC6-218ENST00000591436 UBAP1LF5GYI3 381 aa34.78■■■■□ 3.16
TMC6-218ENST00000591436 ITGAEP38570 1179 aa34.77■■■■□ 3.16
TMC6-218ENST00000591436 STAG3Q9UJ98 1225 aa34.77■■■■□ 3.16
TMC6-218ENST00000591436 ROCK1Q13464 1354 aa34.76■■■■□ 3.16
TMC6-218ENST00000591436 SCAF11Q99590 1463 aaKnown RBP34.76■■■■□ 3.15
TMC6-218ENST00000591436 SLIT1O75093 1534 aa34.74■■■■□ 3.15
TMC6-218ENST00000591436 SYNMO15061 1565 aa34.74■■■■□ 3.15
TMC6-218ENST00000591436 ARHGAP23Q9P227 1491 aa34.73■■■■□ 3.15
TMC6-218ENST00000591436 IDI1Q13907 227 aa34.73■■■■□ 3.15
TMC6-218ENST00000591436 TXNDC2Q86VQ3 553 aa34.73■■■■□ 3.15
TMC6-218ENST00000591436 LTKP29376 864 aa34.72■■■■□ 3.15
TMC6-218ENST00000591436 NOS1P29475 1434 aa34.72■■■■□ 3.15
TMC6-218ENST00000591436 EID1Q9Y6B2 187 aa34.71■■■■□ 3.15
TMC6-218ENST00000591436 UNC13BO14795 1591 aa34.69■■■■□ 3.14
TMC6-218ENST00000591436 TET3O43151 1660 aa34.69■■■■□ 3.14
TMC6-218ENST00000591436 KDM5AP29375 1690 aaKnown RBP34.67■■■■□ 3.14
TMC6-218ENST00000591436 RPRD2Q5VT52 1461 aaKnown RBP34.67■■■■□ 3.14
TMC6-218ENST00000591436 TMEM2Q9UHN6 1383 aa34.67■■■■□ 3.14
TMC6-218ENST00000591436 GCC2Q8IWJ2 1684 aa34.63■■■■□ 3.13
TMC6-218ENST00000591436 SLC52A1Q9NWF4 448 aa34.63■■■■□ 3.13
TMC6-218ENST00000591436 STRCP1A6NGW2 1772 aa34.62■■■■□ 3.13
TMC6-218ENST00000591436 ADGRB3O60242 1522 aa34.6■■■■□ 3.13
TMC6-218ENST00000591436 TOM1O60784 492 aa34.57■■■■□ 3.12
TMC6-218ENST00000591436 SCAF1Q9H7N4 1312 aaKnown RBP34.56■■■■□ 3.12
TMC6-218ENST00000591436 IQGAP3Q86VI3 1631 aa34.55■■■■□ 3.12
TMC6-218ENST00000591436 NUP155O75694 1391 aa34.54■■■■□ 3.12
TMC6-218ENST00000591436 RRBP1Q9P2E9 1410 aaKnown RBP34.54■■■■□ 3.12
TMC6-218ENST00000591436 E9PCH4 1651 aa34.54■■■■□ 3.12
TMC6-218ENST00000591436 PIP4K2BP78356 416 aa34.53■■■■□ 3.12
TMC6-218ENST00000591436 LRRC7Q96NW7 1537 aa34.52■■■■□ 3.12
TMC6-218ENST00000591436 MYO5BQ9ULV0 1848 aa34.5■■■■□ 3.11
TMC6-218ENST00000591436 DISP3Q9P2K9 1392 aa34.46■■■■□ 3.11
TMC6-218ENST00000591436 CHGAP10645 457 aaKnown RBP34.44■■■■□ 3.1
TMC6-218ENST00000591436 TMEM131LA2VDJ0 1609 aa34.44■■■■□ 3.1
TMC6-218ENST00000591436 BCANQ96GW7 911 aa34.43■■■■□ 3.1
TMC6-218ENST00000591436 SLC26A8Q96RN1 970 aa34.43■■■■□ 3.1
TMC6-218ENST00000591436 ZFYVE9O95405 1425 aa34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 394.8 ms