RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ZNF142P52746 1687 aaPredicted RBP33.29■■■□□ 2.92
R3HDM4-206ENST00000590454 MYOM3Q5VTT5 1437 aa33.28■■■□□ 2.92
R3HDM4-206ENST00000590454 CAMSAP2Q08AD1 1489 aa33.18■■■□□ 2.9
R3HDM4-206ENST00000590454 A2ML1A8K2U0 1454 aa33.17■■■□□ 2.9
R3HDM4-206ENST00000590454 MIA2Q96PC5 1412 aa33.16■■■□□ 2.9
R3HDM4-206ENST00000590454 ADGBQ8N7X0 1667 aa33.15■■■□□ 2.9
R3HDM4-206ENST00000590454 FGD6Q6ZV73 1430 aa33.14■■■□□ 2.9
R3HDM4-206ENST00000590454 RTEL1-TNFRSF6BF6WH68 1400 aa33.12■■■□□ 2.89
R3HDM4-206ENST00000590454 DHX29Q7Z478 1369 aaKnown RBP33.11■■■□□ 2.89
R3HDM4-206ENST00000590454 MBD5Q9P267 1494 aa33.11■■■□□ 2.89
R3HDM4-206ENST00000590454 DNMT1P26358 1616 aaKnown RBP33.1■■■□□ 2.89
R3HDM4-206ENST00000590454 PTPN23Q9H3S7 1636 aa33.1■■■□□ 2.89
R3HDM4-206ENST00000590454 SCAF1Q9H7N4 1312 aaKnown RBP33.07■■■□□ 2.88
R3HDM4-206ENST00000590454 TOM1O60784 492 aa33.07■■■□□ 2.88
R3HDM4-206ENST00000590454 TNRQ92752 1358 aa33.06■■■□□ 2.88
R3HDM4-206ENST00000590454 FBXO31Q5XUX0 539 aaPredicted RBP33.05■■■□□ 2.88
R3HDM4-206ENST00000590454 KIF3BO15066 747 aa33.04■■■□□ 2.88
R3HDM4-206ENST00000590454 HSPA1LP34931 641 aa33.04■■■□□ 2.88
R3HDM4-206ENST00000590454 PIP4K2BP78356 416 aa33.04■■■□□ 2.88
R3HDM4-206ENST00000590454 CPS1P31327 1500 aa33.03■■■□□ 2.88
R3HDM4-206ENST00000590454 SHANK2Q9UPX8 1470 aa33■■■□□ 2.87
R3HDM4-206ENST00000590454 ANKLE2Q86XL3 938 aa33■■■□□ 2.87
R3HDM4-206ENST00000590454 WASHC2CQ9Y4E1 1318 aa32.99■■■□□ 2.87
R3HDM4-206ENST00000590454 PZPP20742 1482 aa32.99■■■□□ 2.87
R3HDM4-206ENST00000590454 ARHGEF5Q12774 1597 aa32.98■■■□□ 2.87
R3HDM4-206ENST00000590454 RSPH4AQ5TD94 716 aa32.97■■■□□ 2.87
R3HDM4-206ENST00000590454 THEMISQ8N1K5 641 aaPredicted RBP32.97■■■□□ 2.87
R3HDM4-206ENST00000590454 CCDC141Q6ZP82 1450 aa32.97■■■□□ 2.87
R3HDM4-206ENST00000590454 NEURL4Q96JN8 1562 aa32.96■■■□□ 2.87
R3HDM4-206ENST00000590454 FAM50AQ14320 339 aaKnown RBP32.96■■■□□ 2.87
R3HDM4-206ENST00000590454 KDM5DQ9BY66 1539 aa32.95■■■□□ 2.87
R3HDM4-206ENST00000590454 FAM135AQ9P2D6 1515 aa32.95■■■□□ 2.87
R3HDM4-206ENST00000590454 POLR1AO95602 1720 aaPredicted RBP32.94■■■□□ 2.86
R3HDM4-206ENST00000590454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.94■■■□□ 2.861e-6■■■■□ 20.2
R3HDM4-206ENST00000590454 MED1Q15648 1581 aaPredicted RBP32.91■■■□□ 2.86
R3HDM4-206ENST00000590454 ABCC5O15440 1437 aa32.9■■■□□ 2.86
R3HDM4-206ENST00000590454 NLRP1Q9C000 1473 aa32.89■■■□□ 2.86
R3HDM4-206ENST00000590454 RRBP1Q9P2E9 1410 aaKnown RBP32.86■■■□□ 2.85
R3HDM4-206ENST00000590454 NPHP4O75161 1426 aaPredicted RBP32.85■■■□□ 2.85
R3HDM4-206ENST00000590454 DAPK1P53355 1430 aa32.85■■■□□ 2.85
R3HDM4-206ENST00000590454 UGGT1Q9NYU2 1555 aa32.85■■■□□ 2.85
R3HDM4-206ENST00000590454 MED14O60244 1454 aa32.85■■■□□ 2.85
R3HDM4-206ENST00000590454 VWDEQ8N2E2 1590 aa32.84■■■□□ 2.85
R3HDM4-206ENST00000590454 CROCC2H7BZ55 1655 aa32.84■■■□□ 2.85
R3HDM4-206ENST00000590454 TSPY4P0CV99 314 aa32.83■■■□□ 2.85
R3HDM4-206ENST00000590454 TSPY10P0CW01 314 aa32.83■■■□□ 2.85
R3HDM4-206ENST00000590454 DEPDC5O75140 1603 aa32.8■■■□□ 2.84
R3HDM4-206ENST00000590454 MAST1Q9Y2H9 1570 aa32.79■■■□□ 2.84
R3HDM4-206ENST00000590454 PHF23Q9BUL5 403 aaPredicted RBP32.79■■■□□ 2.84
R3HDM4-206ENST00000590454 CHIC2Q9UKJ5 165 aa32.76■■■□□ 2.83
R3HDM4-206ENST00000590454 ITGAEP38570 1179 aa32.73■■■□□ 2.83
R3HDM4-206ENST00000590454 ALKQ9UM73 1620 aa32.72■■■□□ 2.83
R3HDM4-206ENST00000590454 IQGAP1P46940 1657 aa32.69■■■□□ 2.82
R3HDM4-206ENST00000590454 LRRC7Q96NW7 1537 aa32.67■■■□□ 2.82
R3HDM4-206ENST00000590454 ABCC3O15438 1527 aa32.66■■■□□ 2.82
R3HDM4-206ENST00000590454 RRP7BPQ9NSQ0 103 aa32.65■■■□□ 2.82
R3HDM4-206ENST00000590454 RNF17Q9BXT8 1623 aaKnown RBP32.63■■■□□ 2.81
R3HDM4-206ENST00000590454 SENP3Q9H4L4 574 aaPredicted RBP32.63■■■□□ 2.81
R3HDM4-206ENST00000590454 ERVK-7P63135 1459 aa32.62■■■□□ 2.81
R3HDM4-206ENST00000590454 ADGRL2O95490 1459 aa32.61■■■□□ 2.81
R3HDM4-206ENST00000590454 ZC3H13Q5T200 1668 aaKnown RBP32.61■■■□□ 2.81
R3HDM4-206ENST00000590454 KIF15Q9NS87 1388 aa32.6■■■□□ 2.81
R3HDM4-206ENST00000590454 ANKRD30AQ9BXX3 1397 aa32.59■■■□□ 2.81
R3HDM4-206ENST00000590454 SYNMO15061 1565 aa32.58■■■□□ 2.81
R3HDM4-206ENST00000590454 STRCP1A6NGW2 1772 aa32.58■■■□□ 2.81
R3HDM4-206ENST00000590454 DUOX2Q9NRD8 1548 aa32.54■■■□□ 2.8
R3HDM4-206ENST00000590454 EIF2AK4Q9P2K8 1649 aaKnown RBP32.54■■■□□ 2.8
R3HDM4-206ENST00000590454 SCAF11Q99590 1463 aaKnown RBP32.54■■■□□ 2.8
R3HDM4-206ENST00000590454 TXNDC2Q86VQ3 553 aa32.53■■■□□ 2.8
R3HDM4-206ENST00000590454 ROCK1Q13464 1354 aa32.51■■■□□ 2.79
R3HDM4-206ENST00000590454 LTKP29376 864 aa32.51■■■□□ 2.79
R3HDM4-206ENST00000590454 UBR1Q8IWV7 1749 aa32.48■■■□□ 2.79
R3HDM4-206ENST00000590454 MROH1Q8NDA8 1641 aa32.48■■■□□ 2.79
R3HDM4-206ENST00000590454 EID1Q9Y6B2 187 aa32.47■■■□□ 2.79
R3HDM4-206ENST00000590454 ARHGAP23Q9P227 1491 aa32.46■■■□□ 2.79
R3HDM4-206ENST00000590454 SLIT1O75093 1534 aa32.45■■■□□ 2.78
R3HDM4-206ENST00000590454 ERBINQ96RT1 1412 aa32.44■■■□□ 2.78
R3HDM4-206ENST00000590454 RGS17Q9UGC6 210 aaPredicted RBP32.43■■■□□ 2.78
R3HDM4-206ENST00000590454 ARHGAP31Q2M1Z3 1444 aa32.43■■■□□ 2.78
R3HDM4-206ENST00000590454 CEP152O94986 1710 aa32.42■■■□□ 2.78
R3HDM4-206ENST00000590454 ANKRD50Q9ULJ7 1429 aa32.4■■■□□ 2.78
R3HDM4-206ENST00000590454 CFAP65Q6ZU64 1925 aaKnown RBP32.38■■■□□ 2.77
R3HDM4-206ENST00000590454 NAIPQ13075 1403 aa32.36■■■□□ 2.77
R3HDM4-206ENST00000590454 FAM135BQ49AJ0 1406 aa32.36■■■□□ 2.77
R3HDM4-206ENST00000590454 STAG3Q9UJ98 1225 aa32.36■■■□□ 2.77
R3HDM4-206ENST00000590454 TMEM2Q9UHN6 1383 aa32.34■■■□□ 2.77
R3HDM4-206ENST00000590454 PRDM15P57071 1507 aaPredicted RBP32.33■■■□□ 2.77
R3HDM4-206ENST00000590454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.33■■■□□ 2.77
R3HDM4-206ENST00000590454 HFM1A2PYH4 1435 aa32.32■■■□□ 2.76
R3HDM4-206ENST00000590454 GCC2Q8IWJ2 1684 aa32.31■■■□□ 2.76
R3HDM4-206ENST00000590454 XIRP1Q702N8 1843 aaKnown RBP32.29■■■□□ 2.76
R3HDM4-206ENST00000590454 TMEM94Q12767 1356 aa32.29■■■□□ 2.76
R3HDM4-206ENST00000590454 KCNA6P17658 529 aa32.28■■■□□ 2.76
R3HDM4-206ENST00000590454 KANK1Q14678 1352 aa32.28■■■□□ 2.76
R3HDM4-206ENST00000590454 PIK3C2BO00750 1634 aa32.26■■■□□ 2.76
R3HDM4-206ENST00000590454 IDI1Q13907 227 aa32.25■■■□□ 2.75
R3HDM4-206ENST00000590454 PROSER2Q86WR7 435 aaPredicted RBP32.24■■■□□ 2.75
R3HDM4-206ENST00000590454 POTEAQ6S8J7 498 aa32.22■■■□□ 2.75
R3HDM4-206ENST00000590454 EFCAB6Q5THR3 1501 aa32.21■■■□□ 2.75
R3HDM4-206ENST00000590454 SLC26A8Q96RN1 970 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms