RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
IFT20-216ENST00000588477 FBXO31Q5XUX0 539 aaPredicted RBP24.7■■□□□ 1.54
IFT20-216ENST00000588477 KIF3BO15066 747 aa24.69■■□□□ 1.54
IFT20-216ENST00000588477 PIP4K2BP78356 416 aa24.68■■□□□ 1.54
IFT20-216ENST00000588477 TNRQ92752 1358 aa24.67■■□□□ 1.54
IFT20-216ENST00000588477 CPS1P31327 1500 aa24.67■■□□□ 1.54
IFT20-216ENST00000588477 KDM5DQ9BY66 1539 aa24.66■■□□□ 1.54
IFT20-216ENST00000588477 HSPA1LP34931 641 aa24.66■■□□□ 1.54
IFT20-216ENST00000588477 PZPP20742 1482 aa24.65■■□□□ 1.54
IFT20-216ENST00000588477 SHANK2Q9UPX8 1470 aa24.65■■□□□ 1.54
IFT20-216ENST00000588477 TOM1O60784 492 aa24.65■■□□□ 1.54
IFT20-216ENST00000588477 CEP162Q5TB80 1403 aa24.64■■□□□ 1.54
IFT20-216ENST00000588477 MED1Q15648 1581 aaPredicted RBP24.63■■□□□ 1.53
IFT20-216ENST00000588477 CCDC141Q6ZP82 1450 aa24.63■■□□□ 1.53
IFT20-216ENST00000588477 WASHC2CQ9Y4E1 1318 aa24.62■■□□□ 1.53
IFT20-216ENST00000588477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.62■■□□□ 1.53
IFT20-216ENST00000588477 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
IFT20-216ENST00000588477 ANKLE2Q86XL3 938 aa24.61■■□□□ 1.53
IFT20-216ENST00000588477 CAMSAP2Q08AD1 1489 aa24.6■■□□□ 1.53
IFT20-216ENST00000588477 VWDEQ8N2E2 1590 aa24.59■■□□□ 1.53
IFT20-216ENST00000588477 CFAP65Q6ZU64 1925 aaKnown RBP24.59■■□□□ 1.53
IFT20-216ENST00000588477 UGGT1Q9NYU2 1555 aa24.59■■□□□ 1.53
IFT20-216ENST00000588477 THEMISQ8N1K5 641 aaPredicted RBP24.58■■□□□ 1.53
IFT20-216ENST00000588477 MIA2Q96PC5 1412 aa24.58■■□□□ 1.53
IFT20-216ENST00000588477 DEPDC5O75140 1603 aa24.57■■□□□ 1.52
IFT20-216ENST00000588477 RSPH4AQ5TD94 716 aa24.56■■□□□ 1.52
IFT20-216ENST00000588477 NCOA2Q15596 1464 aa24.56■■□□□ 1.52
IFT20-216ENST00000588477 NLRP1Q9C000 1473 aa24.56■■□□□ 1.52
IFT20-216ENST00000588477 IQGAP1P46940 1657 aa24.56■■□□□ 1.52
IFT20-216ENST00000588477 STRCP1A6NGW2 1772 aa24.54■■□□□ 1.52
IFT20-216ENST00000588477 NPHP4O75161 1426 aaPredicted RBP24.54■■□□□ 1.52
IFT20-216ENST00000588477 MED14O60244 1454 aa24.53■■□□□ 1.52
IFT20-216ENST00000588477 ARHGEF5Q12774 1597 aa24.52■■□□□ 1.52
IFT20-216ENST00000588477 ALKQ9UM73 1620 aa24.52■■□□□ 1.52
IFT20-216ENST00000588477 TSPY4P0CV99 314 aa24.5■■□□□ 1.51
IFT20-216ENST00000588477 TSPY10P0CW01 314 aa24.5■■□□□ 1.51
IFT20-216ENST00000588477 ZC3H13Q5T200 1668 aaKnown RBP24.49■■□□□ 1.51
IFT20-216ENST00000588477 RNF17Q9BXT8 1623 aaKnown RBP24.48■■□□□ 1.51
IFT20-216ENST00000588477 CEP152O94986 1710 aa24.46■■□□□ 1.51
IFT20-216ENST00000588477 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
IFT20-216ENST00000588477 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
IFT20-216ENST00000588477 ABCC3O15438 1527 aa24.44■■□□□ 1.5
IFT20-216ENST00000588477 LRRC7Q96NW7 1537 aa24.43■■□□□ 1.5
IFT20-216ENST00000588477 UBR1Q8IWV7 1749 aa24.43■■□□□ 1.5
IFT20-216ENST00000588477 EIF2AK4Q9P2K8 1649 aaKnown RBP24.42■■□□□ 1.5
IFT20-216ENST00000588477 SYNMO15061 1565 aa24.42■■□□□ 1.5
IFT20-216ENST00000588477 MAST1Q9Y2H9 1570 aa24.42■■□□□ 1.5
IFT20-216ENST00000588477 ERVK-7P63135 1459 aa24.39■■□□□ 1.5
IFT20-216ENST00000588477 MROH1Q8NDA8 1641 aa24.38■■□□□ 1.49
IFT20-216ENST00000588477 XIRP1Q702N8 1843 aaKnown RBP24.38■■□□□ 1.49
IFT20-216ENST00000588477 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.49
IFT20-216ENST00000588477 SCAF11Q99590 1463 aaKnown RBP24.32■■□□□ 1.48
IFT20-216ENST00000588477 LTKP29376 864 aa24.29■■□□□ 1.48
IFT20-216ENST00000588477 DUOX2Q9NRD8 1548 aa24.28■■□□□ 1.48
IFT20-216ENST00000588477 SLIT1O75093 1534 aa24.27■■□□□ 1.48
IFT20-216ENST00000588477 TXNDC2Q86VQ3 553 aa24.27■■□□□ 1.48
IFT20-216ENST00000588477 ARHGAP23Q9P227 1491 aa24.26■■□□□ 1.47
IFT20-216ENST00000588477 PIK3C2BO00750 1634 aa24.25■■□□□ 1.47
IFT20-216ENST00000588477 KANK4Q5T7N3 995 aaPredicted RBP24.24■■□□□ 1.47
IFT20-216ENST00000588477 VPS8Q8N3P4 1428 aa24.24■■□□□ 1.47
IFT20-216ENST00000588477 MYOM3Q5VTT5 1437 aa24.23■■□□□ 1.47
IFT20-216ENST00000588477 CROCC2H7BZ55 1655 aa24.23■■□□□ 1.47
IFT20-216ENST00000588477 PRDM15P57071 1507 aaPredicted RBP24.22■■□□□ 1.47
IFT20-216ENST00000588477 ARHGAP31Q2M1Z3 1444 aa24.21■■□□□ 1.47
IFT20-216ENST00000588477 RGS17Q9UGC6 210 aaPredicted RBP24.21■■□□□ 1.47
IFT20-216ENST00000588477 EID1Q9Y6B2 187 aa24.21■■□□□ 1.47
IFT20-216ENST00000588477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.18■■□□□ 1.463e-6■■□□□ 11.7
IFT20-216ENST00000588477 KIF15Q9NS87 1388 aa24.17■■□□□ 1.46
IFT20-216ENST00000588477 MAP3K1Q13233 1512 aa24.17■■□□□ 1.46
IFT20-216ENST00000588477 RRP7BPQ9NSQ0 103 aa24.17■■□□□ 1.46
IFT20-216ENST00000588477 STAG3Q9UJ98 1225 aa24.16■■□□□ 1.46
IFT20-216ENST00000588477 ERBINQ96RT1 1412 aa24.16■■□□□ 1.46
IFT20-216ENST00000588477 KDM5AP29375 1690 aaKnown RBP24.15■■□□□ 1.46
IFT20-216ENST00000588477 TMEM2Q9UHN6 1383 aa24.15■■□□□ 1.46
IFT20-216ENST00000588477 PTPN23Q9H3S7 1636 aa24.13■■□□□ 1.45
IFT20-216ENST00000588477 FAM135BQ49AJ0 1406 aa24.13■■□□□ 1.45
IFT20-216ENST00000588477 ROBO1Q9Y6N7 1651 aa24.13■■□□□ 1.45
IFT20-216ENST00000588477 ABCC5O15440 1437 aa24.12■■□□□ 1.45
IFT20-216ENST00000588477 EFCAB6Q5THR3 1501 aa24.11■■□□□ 1.45
IFT20-216ENST00000588477 LOC105371045A0A1W2PR82 267 aa24.11■■□□□ 1.45
IFT20-216ENST00000588477 TMEM94Q12767 1356 aa24.1■■□□□ 1.45
IFT20-216ENST00000588477 KANK1Q14678 1352 aa24.1■■□□□ 1.45
IFT20-216ENST00000588477 TET3O43151 1660 aa24.08■■□□□ 1.45
IFT20-216ENST00000588477 IDI1Q13907 227 aa24.08■■□□□ 1.45
IFT20-216ENST00000588477 KCNA6P17658 529 aa24.07■■□□□ 1.44
IFT20-216ENST00000588477 RBM33Q96EV2 1170 aaKnown RBP24.07■■□□□ 1.44
IFT20-216ENST00000588477 SLC26A8Q96RN1 970 aa24.07■■□□□ 1.44
IFT20-216ENST00000588477 PROSER2Q86WR7 435 aaPredicted RBP24.06■■□□□ 1.44
IFT20-216ENST00000588477 DAPK1P53355 1430 aa24.06■■□□□ 1.44
IFT20-216ENST00000588477 MYO5BQ9ULV0 1848 aa24.05■■□□□ 1.44
IFT20-216ENST00000588477 POTEAQ6S8J7 498 aa24.05■■□□□ 1.44
IFT20-216ENST00000588477 LMTK2Q8IWU2 1503 aa24.04■■□□□ 1.44
IFT20-216ENST00000588477 PHLPP1O60346 1717 aa24.02■■□□□ 1.44
IFT20-216ENST00000588477 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
IFT20-216ENST00000588477 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
IFT20-216ENST00000588477 ADGRB3O60242 1522 aa24■■□□□ 1.43
IFT20-216ENST00000588477 NWD1Q149M9 1564 aa24■■□□□ 1.43
IFT20-216ENST00000588477 BCANQ96GW7 911 aa23.99■■□□□ 1.43
IFT20-216ENST00000588477 ANKRD30AQ9BXX3 1397 aa23.99■■□□□ 1.43
IFT20-216ENST00000588477 NOS1P29475 1434 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms