RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
IFT20-216ENST00000588477 ABCC9O60706 1549 aa35.49■■■■□ 3.27
IFT20-216ENST00000588477 CCDC180Q9P1Z9 1646 aa35.13■■■■□ 3.21
IFT20-216ENST00000588477 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
IFT20-216ENST00000588477 RB1CC1Q8TDY2 1594 aa33.61■■■□□ 2.97
IFT20-216ENST00000588477 NACADO15069 1562 aa33.26■■■□□ 2.91
IFT20-216ENST00000588477 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
IFT20-216ENST00000588477 UNC13AQ9UPW8 1703 aa33.01■■■□□ 2.87
IFT20-216ENST00000588477 PABPN1Q86U42 306 aaKnown RBP eCLIP32.98■■■□□ 2.87
IFT20-216ENST00000588477 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
IFT20-216ENST00000588477 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
IFT20-216ENST00000588477 ZCCHC6Q5VYS8 1495 aaKnown RBP32.13■■■□□ 2.73
IFT20-216ENST00000588477 SHROOM4Q9ULL8 1493 aa32.08■■■□□ 2.73
IFT20-216ENST00000588477 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
IFT20-216ENST00000588477 DCAF1Q9Y4B6 1507 aa32.07■■■□□ 2.72
IFT20-216ENST00000588477 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
IFT20-216ENST00000588477 CECR2Q9BXF3 1484 aa31.98■■■□□ 2.71
IFT20-216ENST00000588477 EIF4G1Q04637 1599 aaKnown RBP31.88■■■□□ 2.69
IFT20-216ENST00000588477 DNAJC5Q9H3Z4 198 aa31.15■■■□□ 2.58
IFT20-216ENST00000588477 CUX2O14529 1486 aa30.71■■■□□ 2.51
IFT20-216ENST00000588477 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
IFT20-216ENST00000588477 ERCC6Q03468 1493 aa30.66■■■□□ 2.5
IFT20-216ENST00000588477 ATAD2BQ9ULI0 1458 aa30.54■■■□□ 2.48
IFT20-216ENST00000588477 SMARCA4P51532 1647 aa30.47■■■□□ 2.47
IFT20-216ENST00000588477 SMARCA2P51531 1590 aa30.45■■■□□ 2.46
IFT20-216ENST00000588477 HMGXB3Q12766 1538 aa30.43■■■□□ 2.46
IFT20-216ENST00000588477 NESP48681 1621 aa30.39■■■□□ 2.46
IFT20-216ENST00000588477 BAZ1BQ9UIG0 1483 aaKnown RBP30.25■■■□□ 2.43
IFT20-216ENST00000588477 BAZ1AQ9NRL2 1556 aaPredicted RBP30.23■■■□□ 2.43
IFT20-216ENST00000588477 THOC2Q8NI27 1593 aaKnown RBP30.16■■■□□ 2.42
IFT20-216ENST00000588477 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
IFT20-216ENST00000588477 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
IFT20-216ENST00000588477 KIF21AQ7Z4S6 1674 aa30.07■■■□□ 2.4
IFT20-216ENST00000588477 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
IFT20-216ENST00000588477 PDS5BQ9NTI5 1447 aa29.9■■■□□ 2.38
IFT20-216ENST00000588477 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
IFT20-216ENST00000588477 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
IFT20-216ENST00000588477 WIZO95785 1651 aa29.68■■■□□ 2.34
IFT20-216ENST00000588477 MRC2Q9UBG0 1479 aa29.68■■■□□ 2.34
IFT20-216ENST00000588477 WDR62O43379 1518 aa29.62■■■□□ 2.33
IFT20-216ENST00000588477 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
IFT20-216ENST00000588477 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
IFT20-216ENST00000588477 CFTRP13569 1480 aa29.31■■■□□ 2.28
IFT20-216ENST00000588477 OSCARQ8IYS5 282 aa29.27■■■□□ 2.28
IFT20-216ENST00000588477 URB2Q14146 1524 aaKnown RBP29.21■■■□□ 2.27
IFT20-216ENST00000588477 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
IFT20-216ENST00000588477 RSF1Q96T23 1441 aaPredicted RBP29.19■■■□□ 2.26
IFT20-216ENST00000588477 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
IFT20-216ENST00000588477 RIMBP3CA6NJZ7 1639 aa28.99■■■□□ 2.23
IFT20-216ENST00000588477 RIMBP3BA6NNM3 1639 aa28.99■■■□□ 2.23
IFT20-216ENST00000588477 RIMBP3Q9UFD9 1639 aa28.99■■■□□ 2.23
IFT20-216ENST00000588477 ZNF608Q9ULD9 1512 aaPredicted RBP28.92■■■□□ 2.22
IFT20-216ENST00000588477 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
IFT20-216ENST00000588477 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
IFT20-216ENST00000588477 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
IFT20-216ENST00000588477 ARHGEF11O15085 1522 aa28.8■■■□□ 2.2
IFT20-216ENST00000588477 EIF4G3O43432 1585 aaKnown RBP28.77■■■□□ 2.2
IFT20-216ENST00000588477 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
IFT20-216ENST00000588477 CHD1O14646 1710 aa28.72■■■□□ 2.19
IFT20-216ENST00000588477 DNMBPQ6XZF7 1577 aa28.7■■■□□ 2.18
IFT20-216ENST00000588477 TARBP1Q13395 1621 aaKnown RBP28.63■■■□□ 2.17
IFT20-216ENST00000588477 CYB5RLQ6IPT4 315 aa28.63■■■□□ 2.17
IFT20-216ENST00000588477 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.17
IFT20-216ENST00000588477 FBLN2P98095 1184 aa28.53■■■□□ 2.16
IFT20-216ENST00000588477 POLA1P09884 1462 aaPredicted RBP28.5■■■□□ 2.15
IFT20-216ENST00000588477 ARAP1Q96P48 1450 aa28.48■■■□□ 2.15
IFT20-216ENST00000588477 TRHP20396 242 aaPredicted RBP28.46■■■□□ 2.15
IFT20-216ENST00000588477 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
IFT20-216ENST00000588477 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
IFT20-216ENST00000588477 SOGA1O94964 1423 aa28.36■■■□□ 2.13
IFT20-216ENST00000588477 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
IFT20-216ENST00000588477 WDR97A6NE52 1622 aa28.28■■■□□ 2.12
IFT20-216ENST00000588477 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
IFT20-216ENST00000588477 CLASP1Q7Z460 1538 aa28.26■■■□□ 2.11
IFT20-216ENST00000588477 CHMP7Q8WUX9 453 aaPredicted RBP28.23■■■□□ 2.11
IFT20-216ENST00000588477 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
IFT20-216ENST00000588477 CUX1P39880 1505 aa28.19■■■□□ 2.1
IFT20-216ENST00000588477 MAGI1Q96QZ7 1491 aaPredicted RBP28.19■■■□□ 2.1
IFT20-216ENST00000588477 GRIN2BQ13224 1484 aa28.15■■■□□ 2.1
IFT20-216ENST00000588477 PBRM1Q86U86 1689 aa28.14■■■□□ 2.1
IFT20-216ENST00000588477 SYNJ2O15056 1496 aa28.1■■■□□ 2.09
IFT20-216ENST00000588477 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
IFT20-216ENST00000588477 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
IFT20-216ENST00000588477 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
IFT20-216ENST00000588477 ABCA10Q8WWZ4 1543 aa27.91■■■□□ 2.06
IFT20-216ENST00000588477 ERCC6L2Q5T890 1561 aa27.83■■■□□ 2.05
IFT20-216ENST00000588477 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
IFT20-216ENST00000588477 ADAMTS12P58397 1594 aa27.75■■■□□ 2.03
IFT20-216ENST00000588477 CEP170Q5SW79 1584 aa27.75■■■□□ 2.03
IFT20-216ENST00000588477 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.03
IFT20-216ENST00000588477 NUP160Q12769 1436 aa27.69■■■□□ 2.02
IFT20-216ENST00000588477 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
IFT20-216ENST00000588477 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
IFT20-216ENST00000588477 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
IFT20-216ENST00000588477 TOP2BQ02880 1626 aa27.65■■■□□ 2.02
IFT20-216ENST00000588477 KIF13AQ9H1H9 1805 aa27.63■■■□□ 2.01
IFT20-216ENST00000588477 FHAD1B1AJZ9 1412 aa27.62■■■□□ 2.01
IFT20-216ENST00000588477 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
IFT20-216ENST00000588477 PRG4Q92954 1404 aaPredicted RBP27.49■■□□□ 1.99
IFT20-216ENST00000588477 JPH4Q96JJ6 628 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms