RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 WASHC2CQ9Y4E1 1318 aa22.39■■□□□ 1.18
DNMT1-213ENST00000587604 TSPY4P0CV99 314 aa22.39■■□□□ 1.17
DNMT1-213ENST00000587604 TSPY10P0CW01 314 aa22.39■■□□□ 1.17
DNMT1-213ENST00000587604 FBXO31Q5XUX0 539 aaPredicted RBP22.39■■□□□ 1.17
DNMT1-213ENST00000587604 FAM135AQ9P2D6 1515 aa22.39■■□□□ 1.17
DNMT1-213ENST00000587604 ARHGEF5Q12774 1597 aa22.38■■□□□ 1.17
DNMT1-213ENST00000587604 TNRQ92752 1358 aa22.38■■□□□ 1.17
DNMT1-213ENST00000587604 KDM5DQ9BY66 1539 aa22.37■■□□□ 1.17
DNMT1-213ENST00000587604 PZPP20742 1482 aa22.36■■□□□ 1.17
DNMT1-213ENST00000587604 UBAP1LF5GYI3 381 aa22.35■■□□□ 1.17
DNMT1-213ENST00000587604 ILDR2Q71H61 639 aa22.35■■□□□ 1.17
DNMT1-213ENST00000587604 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
DNMT1-213ENST00000587604 VPS8Q8N3P4 1428 aa22.33■■□□□ 1.17
DNMT1-213ENST00000587604 MIA2Q96PC5 1412 aa22.31■■□□□ 1.16
DNMT1-213ENST00000587604 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
DNMT1-213ENST00000587604 THEMISQ8N1K5 641 aaPredicted RBP22.3■■□□□ 1.16
DNMT1-213ENST00000587604 POLR1AO95602 1720 aaPredicted RBP22.3■■□□□ 1.16
DNMT1-213ENST00000587604 ANKLE2Q86XL3 938 aa22.29■■□□□ 1.16
DNMT1-213ENST00000587604 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
DNMT1-213ENST00000587604 NLRP1Q9C000 1473 aa22.28■■□□□ 1.16
DNMT1-213ENST00000587604 NEURL4Q96JN8 1562 aa22.27■■□□□ 1.16
DNMT1-213ENST00000587604 MAP3K1Q13233 1512 aa22.26■■□□□ 1.15
DNMT1-213ENST00000587604 MAST1Q9Y2H9 1570 aa22.26■■□□□ 1.15
DNMT1-213ENST00000587604 SOCS7O14512 581 aa22.26■■□□□ 1.15
DNMT1-213ENST00000587604 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
DNMT1-213ENST00000587604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.25■■□□□ 1.15
DNMT1-213ENST00000587604 RNF17Q9BXT8 1623 aaKnown RBP22.24■■□□□ 1.15
DNMT1-213ENST00000587604 UGGT1Q9NYU2 1555 aa22.24■■□□□ 1.15
DNMT1-213ENST00000587604 SHANK2Q9UPX8 1470 aa22.23■■□□□ 1.15
DNMT1-213ENST00000587604 CPS1P31327 1500 aa22.23■■□□□ 1.15
DNMT1-213ENST00000587604 MYOM3Q5VTT5 1437 aa22.21■■□□□ 1.15
DNMT1-213ENST00000587604 ABCC3O15438 1527 aa22.21■■□□□ 1.15
DNMT1-213ENST00000587604 EIF2AK4Q9P2K8 1649 aaKnown RBP22.2■■□□□ 1.15
DNMT1-213ENST00000587604 ZC3H13Q5T200 1668 aaKnown RBP22.2■■□□□ 1.15
DNMT1-213ENST00000587604 MED14O60244 1454 aa22.2■■□□□ 1.14
DNMT1-213ENST00000587604 DEPDC5O75140 1603 aa22.2■■□□□ 1.14
DNMT1-213ENST00000587604 TOM1O60784 492 aa22.19■■□□□ 1.14
DNMT1-213ENST00000587604 NPHP4O75161 1426 aaPredicted RBP22.18■■□□□ 1.14
DNMT1-213ENST00000587604 CFAP65Q6ZU64 1925 aaKnown RBP22.18■■□□□ 1.14
DNMT1-213ENST00000587604 VWDEQ8N2E2 1590 aa22.16■■□□□ 1.14
DNMT1-213ENST00000587604 MROH1Q8NDA8 1641 aa22.15■■□□□ 1.14
DNMT1-213ENST00000587604 DUOX2Q9NRD8 1548 aa22.15■■□□□ 1.14
DNMT1-213ENST00000587604 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
DNMT1-213ENST00000587604 PIP4K2BP78356 416 aa22.14■■□□□ 1.13
DNMT1-213ENST00000587604 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
DNMT1-213ENST00000587604 IQGAP1P46940 1657 aa22.12■■□□□ 1.13
DNMT1-213ENST00000587604 HSPA1LP34931 641 aa22.12■■□□□ 1.13
DNMT1-213ENST00000587604 CEP152O94986 1710 aa22.11■■□□□ 1.13
DNMT1-213ENST00000587604 APLP2Q06481 763 aa22.09■■□□□ 1.13
DNMT1-213ENST00000587604 KIF15Q9NS87 1388 aa22.09■■□□□ 1.13
DNMT1-213ENST00000587604 ABCC5O15440 1437 aa22.08■■□□□ 1.13
DNMT1-213ENST00000587604 RRP7BPQ9NSQ0 103 aa22.08■■□□□ 1.13
DNMT1-213ENST00000587604 ARHGAP31Q2M1Z3 1444 aa22.07■■□□□ 1.12
DNMT1-213ENST00000587604 UBR1Q8IWV7 1749 aa22.07■■□□□ 1.12
DNMT1-213ENST00000587604 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
DNMT1-213ENST00000587604 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
DNMT1-213ENST00000587604 CROCC2H7BZ55 1655 aa22.05■■□□□ 1.12
DNMT1-213ENST00000587604 PRDM15P57071 1507 aaPredicted RBP22.05■■□□□ 1.12
DNMT1-213ENST00000587604 STRCP1A6NGW2 1772 aa22.04■■□□□ 1.12
DNMT1-213ENST00000587604 SCAF11Q99590 1463 aaKnown RBP22.03■■□□□ 1.12
DNMT1-213ENST00000587604 ALKQ9UM73 1620 aa22.02■■□□□ 1.12
DNMT1-213ENST00000587604 LRRC7Q96NW7 1537 aa22.02■■□□□ 1.12
DNMT1-213ENST00000587604 TXNDC2Q86VQ3 553 aa22.02■■□□□ 1.12
DNMT1-213ENST00000587604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.123e-8■□□□□ 8.7
DNMT1-213ENST00000587604 DAPK1P53355 1430 aa22.02■■□□□ 1.12
DNMT1-213ENST00000587604 LTKP29376 864 aa22.01■■□□□ 1.11
DNMT1-213ENST00000587604 ARHGAP23Q9P227 1491 aa22.01■■□□□ 1.11
DNMT1-213ENST00000587604 SLIT1O75093 1534 aa22.01■■□□□ 1.11
DNMT1-213ENST00000587604 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
DNMT1-213ENST00000587604 SYNMO15061 1565 aa21.99■■□□□ 1.11
DNMT1-213ENST00000587604 KANK1Q14678 1352 aa21.99■■□□□ 1.11
DNMT1-213ENST00000587604 EID1Q9Y6B2 187 aa21.98■■□□□ 1.11
DNMT1-213ENST00000587604 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
DNMT1-213ENST00000587604 ANKRD30AQ9BXX3 1397 aa21.97■■□□□ 1.11
DNMT1-213ENST00000587604 CHIC2Q9UKJ5 165 aa21.95■■□□□ 1.1
DNMT1-213ENST00000587604 STAG3Q9UJ98 1225 aa21.94■■□□□ 1.1
DNMT1-213ENST00000587604 TMEM2Q9UHN6 1383 aa21.94■■□□□ 1.1
DNMT1-213ENST00000587604 PIK3C2BO00750 1634 aa21.94■■□□□ 1.1
DNMT1-213ENST00000587604 LMTK2Q8IWU2 1503 aa21.93■■□□□ 1.1
DNMT1-213ENST00000587604 IDI1Q13907 227 aa21.92■■□□□ 1.1
DNMT1-213ENST00000587604 KDM5AP29375 1690 aaKnown RBP21.91■■□□□ 1.1
DNMT1-213ENST00000587604 EFCAB6Q5THR3 1501 aa21.88■■□□□ 1.09
DNMT1-213ENST00000587604 XIRP1Q702N8 1843 aaKnown RBP21.87■■□□□ 1.09
DNMT1-213ENST00000587604 SENP3Q9H4L4 574 aaPredicted RBP21.87■■□□□ 1.09
DNMT1-213ENST00000587604 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
DNMT1-213ENST00000587604 NOS1P29475 1434 aa21.86■■□□□ 1.09
DNMT1-213ENST00000587604 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
DNMT1-213ENST00000587604 SLC52A1Q9NWF4 448 aa21.84■■□□□ 1.09
DNMT1-213ENST00000587604 KCNA6P17658 529 aa21.83■■□□□ 1.09
DNMT1-213ENST00000587604 FAM50AQ14320 339 aaKnown RBP21.82■■□□□ 1.08
DNMT1-213ENST00000587604 TET3O43151 1660 aa21.82■■□□□ 1.08
DNMT1-213ENST00000587604 SLC26A8Q96RN1 970 aa21.81■■□□□ 1.08
DNMT1-213ENST00000587604 ANKRD50Q9ULJ7 1429 aa21.8■■□□□ 1.08
DNMT1-213ENST00000587604 TMEM94Q12767 1356 aa21.79■■□□□ 1.08
DNMT1-213ENST00000587604 ADGRB3O60242 1522 aa21.79■■□□□ 1.08
DNMT1-213ENST00000587604 FAM135BQ49AJ0 1406 aa21.79■■□□□ 1.08
DNMT1-213ENST00000587604 RPRD2Q5VT52 1461 aaKnown RBP21.78■■□□□ 1.08
DNMT1-213ENST00000587604 PROSER2Q86WR7 435 aaPredicted RBP21.77■■□□□ 1.08
DNMT1-213ENST00000587604 BCANQ96GW7 911 aa21.74■■□□□ 1.07
DNMT1-213ENST00000587604 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms