RNA–Protein interactions for RNA: ENST00000586737.5

ERCC2-208, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-208ENST00000586737 WASHC2CQ9Y4E1 1318 aa20.22■□□□□ 0.83
ERCC2-208ENST00000586737 CERKQ8TCT0 537 aa20.21■□□□□ 0.83
ERCC2-208ENST00000586737 TCOF1Q13428 1488 aaKnown RBP20.21■□□□□ 0.83
ERCC2-208ENST00000586737 KDM5DQ9BY66 1539 aa20.2■□□□□ 0.82
ERCC2-208ENST00000586737 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
ERCC2-208ENST00000586737 PZPP20742 1482 aa20.18■□□□□ 0.82
ERCC2-208ENST00000586737 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
ERCC2-208ENST00000586737 PTPN23Q9H3S7 1636 aa20.17■□□□□ 0.82
ERCC2-208ENST00000586737 DAPK1P53355 1430 aa20.17■□□□□ 0.82
ERCC2-208ENST00000586737 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
ERCC2-208ENST00000586737 NCKAP5LQ9HCH0 1330 aa20.16■□□□□ 0.82
ERCC2-208ENST00000586737 TNRQ92752 1358 aa20.16■□□□□ 0.82
ERCC2-208ENST00000586737 KIF15Q9NS87 1388 aa20.16■□□□□ 0.82
ERCC2-208ENST00000586737 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
ERCC2-208ENST00000586737 CEP170BQ9Y4F5 1589 aaPredicted RBP20.15■□□□□ 0.82
ERCC2-208ENST00000586737 MYO3AQ8NEV4 1616 aa20.15■□□□□ 0.82
ERCC2-208ENST00000586737 DUOX2Q9NRD8 1548 aa20.14■□□□□ 0.81
ERCC2-208ENST00000586737 A2ML1A8K2U0 1454 aa20.14■□□□□ 0.81
ERCC2-208ENST00000586737 PLA2R1Q13018 1463 aa20.14■□□□□ 0.81
ERCC2-208ENST00000586737 RNF17Q9BXT8 1623 aaKnown RBP20.13■□□□□ 0.81
ERCC2-208ENST00000586737 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
ERCC2-208ENST00000586737 ABCC3O15438 1527 aa20.12■□□□□ 0.81
ERCC2-208ENST00000586737 ZNF142P52746 1687 aaPredicted RBP20.11■□□□□ 0.81
ERCC2-208ENST00000586737 DNMT1P26358 1616 aaKnown RBP20.1■□□□□ 0.81
ERCC2-208ENST00000586737 PKD2Q13563 968 aa20.1■□□□□ 0.81
ERCC2-208ENST00000586737 CHIC2Q9UKJ5 165 aa20.1■□□□□ 0.81
ERCC2-208ENST00000586737 ERBINQ96RT1 1412 aa20.1■□□□□ 0.81
ERCC2-208ENST00000586737 EIF2AK4Q9P2K8 1649 aaKnown RBP20.09■□□□□ 0.81
ERCC2-208ENST00000586737 LTBP4Q8N2S1 1624 aa20.08■□□□□ 0.8
ERCC2-208ENST00000586737 CROCC2H7BZ55 1655 aa20.06■□□□□ 0.8
ERCC2-208ENST00000586737 ANKRD30AQ9BXX3 1397 aa20.06■□□□□ 0.8
ERCC2-208ENST00000586737 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
ERCC2-208ENST00000586737 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
ERCC2-208ENST00000586737 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
ERCC2-208ENST00000586737 SPATA31D1Q6ZQQ2 1576 aa20.04■□□□□ 0.8
ERCC2-208ENST00000586737 ZNF335Q9H4Z2 1342 aaPredicted RBP20.03■□□□□ 0.8
ERCC2-208ENST00000586737 PRDM15P57071 1507 aaPredicted RBP20.03■□□□□ 0.8
ERCC2-208ENST00000586737 ADGRL2O95490 1459 aa20.03■□□□□ 0.8
ERCC2-208ENST00000586737 ARHGAP31Q2M1Z3 1444 aa20.02■□□□□ 0.8
ERCC2-208ENST00000586737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.02■□□□□ 0.8
ERCC2-208ENST00000586737 THEMISQ8N1K5 641 aaPredicted RBP20.01■□□□□ 0.79
ERCC2-208ENST00000586737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.01■□□□□ 0.792e-8■■□□□ 11.9
ERCC2-208ENST00000586737 ZC3H13Q5T200 1668 aaKnown RBP20■□□□□ 0.79
ERCC2-208ENST00000586737 UGGT1Q9NYU2 1555 aa19.98■□□□□ 0.79
ERCC2-208ENST00000586737 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
ERCC2-208ENST00000586737 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
ERCC2-208ENST00000586737 VWDEQ8N2E2 1590 aa19.96■□□□□ 0.79
ERCC2-208ENST00000586737 DEPDC5O75140 1603 aa19.96■□□□□ 0.79
ERCC2-208ENST00000586737 PPARGC1BQ86YN6 1023 aaKnown RBP19.96■□□□□ 0.79
ERCC2-208ENST00000586737 LMTK2Q8IWU2 1503 aa19.96■□□□□ 0.79
ERCC2-208ENST00000586737 ANKRD50Q9ULJ7 1429 aa19.94■□□□□ 0.78
ERCC2-208ENST00000586737 KANK1Q14678 1352 aa19.94■□□□□ 0.78
ERCC2-208ENST00000586737 CEP152O94986 1710 aa19.93■□□□□ 0.78
ERCC2-208ENST00000586737 IQSEC2Q5JU85 1478 aa19.93■□□□□ 0.78
ERCC2-208ENST00000586737 MED14O60244 1454 aa19.92■□□□□ 0.78
ERCC2-208ENST00000586737 NPHP4O75161 1426 aaPredicted RBP19.91■□□□□ 0.78
ERCC2-208ENST00000586737 ROCK1Q13464 1354 aa19.89■□□□□ 0.77
ERCC2-208ENST00000586737 NOS1P29475 1434 aa19.88■□□□□ 0.77
ERCC2-208ENST00000586737 ARHGAP23Q9P227 1491 aa19.87■□□□□ 0.77
ERCC2-208ENST00000586737 LTKP29376 864 aa19.87■□□□□ 0.77
ERCC2-208ENST00000586737 IDI1Q13907 227 aa19.87■□□□□ 0.77
ERCC2-208ENST00000586737 EFCAB6Q5THR3 1501 aa19.84■□□□□ 0.77
ERCC2-208ENST00000586737 SLIT1O75093 1534 aa19.83■□□□□ 0.77
ERCC2-208ENST00000586737 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
ERCC2-208ENST00000586737 UBR1Q8IWV7 1749 aa19.82■□□□□ 0.76
ERCC2-208ENST00000586737 SCAF11Q99590 1463 aaKnown RBP19.82■□□□□ 0.76
ERCC2-208ENST00000586737 ITGAEP38570 1179 aa19.82■□□□□ 0.76
ERCC2-208ENST00000586737 TXNDC2Q86VQ3 553 aa19.82■□□□□ 0.76
ERCC2-208ENST00000586737 SYNMO15061 1565 aa19.82■□□□□ 0.76
ERCC2-208ENST00000586737 TMEM2Q9UHN6 1383 aa19.82■□□□□ 0.76
ERCC2-208ENST00000586737 UBAP1LF5GYI3 381 aa19.8■□□□□ 0.76
ERCC2-208ENST00000586737 CPS1P31327 1500 aa19.8■□□□□ 0.76
ERCC2-208ENST00000586737 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
ERCC2-208ENST00000586737 SLC52A1Q9NWF4 448 aa19.79■□□□□ 0.76
ERCC2-208ENST00000586737 RPRD2Q5VT52 1461 aaKnown RBP19.79■□□□□ 0.76
ERCC2-208ENST00000586737 PIK3C2BO00750 1634 aa19.78■□□□□ 0.76
ERCC2-208ENST00000586737 IQGAP1P46940 1657 aa19.76■□□□□ 0.75
ERCC2-208ENST00000586737 UNC13BO14795 1591 aa19.76■□□□□ 0.75
ERCC2-208ENST00000586737 STAG3Q9UJ98 1225 aa19.76■□□□□ 0.75
ERCC2-208ENST00000586737 CFAP65Q6ZU64 1925 aaKnown RBP19.75■□□□□ 0.75
ERCC2-208ENST00000586737 EID1Q9Y6B2 187 aa19.75■□□□□ 0.75
ERCC2-208ENST00000586737 NUP155O75694 1391 aa19.73■□□□□ 0.75
ERCC2-208ENST00000586737 TET3O43151 1660 aa19.71■□□□□ 0.75
ERCC2-208ENST00000586737 ADGRB3O60242 1522 aa19.71■□□□□ 0.75
ERCC2-208ENST00000586737 LRRC7Q96NW7 1537 aa19.71■□□□□ 0.75
ERCC2-208ENST00000586737 KDM5AP29375 1690 aaKnown RBP19.69■□□□□ 0.74
ERCC2-208ENST00000586737 ZFYVE9O95405 1425 aa19.68■□□□□ 0.74
ERCC2-208ENST00000586737 IQGAP3Q86VI3 1631 aa19.67■□□□□ 0.74
ERCC2-208ENST00000586737 ALKQ9UM73 1620 aa19.67■□□□□ 0.74
ERCC2-208ENST00000586737 TOM1O60784 492 aa19.67■□□□□ 0.74
ERCC2-208ENST00000586737 STRCP1A6NGW2 1772 aa19.67■□□□□ 0.74
ERCC2-208ENST00000586737 NAIPQ13075 1403 aa19.67■□□□□ 0.74
ERCC2-208ENST00000586737 SLC26A8Q96RN1 970 aa19.66■□□□□ 0.74
ERCC2-208ENST00000586737 PIP4K2BP78356 416 aa19.65■□□□□ 0.74
ERCC2-208ENST00000586737 E9PCH4 1651 aa19.64■□□□□ 0.73
ERCC2-208ENST00000586737 RIMS2Q9UQ26 1411 aa19.63■□□□□ 0.73
ERCC2-208ENST00000586737 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
ERCC2-208ENST00000586737 KCNA6P17658 529 aa19.62■□□□□ 0.73
ERCC2-208ENST00000586737 HSPA1LP34931 641 aa19.62■□□□□ 0.73
ERCC2-208ENST00000586737 TMEM131LA2VDJ0 1609 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms