RNA–Protein interactions for RNA: ENST00000586737.5

ERCC2-208, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-208ENST00000586737 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
ERCC2-208ENST00000586737 CCDC180Q9P1Z9 1646 aa28.56■■■□□ 2.16
ERCC2-208ENST00000586737 ABCC9O60706 1549 aa28.45■■■□□ 2.15
ERCC2-208ENST00000586737 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
ERCC2-208ENST00000586737 NACADO15069 1562 aa27.02■■□□□ 1.92
ERCC2-208ENST00000586737 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
ERCC2-208ENST00000586737 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
ERCC2-208ENST00000586737 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
ERCC2-208ENST00000586737 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
ERCC2-208ENST00000586737 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
ERCC2-208ENST00000586737 DCAF1Q9Y4B6 1507 aa26.54■■□□□ 1.84
ERCC2-208ENST00000586737 BICRAQ9NZM4 1560 aa26.4■■□□□ 1.82
ERCC2-208ENST00000586737 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.81
ERCC2-208ENST00000586737 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
ERCC2-208ENST00000586737 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
ERCC2-208ENST00000586737 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
ERCC2-208ENST00000586737 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
ERCC2-208ENST00000586737 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
ERCC2-208ENST00000586737 NCAPD3P42695 1498 aa25.03■■□□□ 1.6
ERCC2-208ENST00000586737 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
ERCC2-208ENST00000586737 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
ERCC2-208ENST00000586737 BAZ1AQ9NRL2 1556 aaPredicted RBP24.85■■□□□ 1.57
ERCC2-208ENST00000586737 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
ERCC2-208ENST00000586737 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
ERCC2-208ENST00000586737 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
ERCC2-208ENST00000586737 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
ERCC2-208ENST00000586737 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
ERCC2-208ENST00000586737 NESP48681 1621 aa24.53■■□□□ 1.52
ERCC2-208ENST00000586737 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
ERCC2-208ENST00000586737 WIZO95785 1651 aa24.39■■□□□ 1.49
ERCC2-208ENST00000586737 CUX2O14529 1486 aa24.38■■□□□ 1.49
ERCC2-208ENST00000586737 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
ERCC2-208ENST00000586737 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
ERCC2-208ENST00000586737 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
ERCC2-208ENST00000586737 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
ERCC2-208ENST00000586737 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
ERCC2-208ENST00000586737 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
ERCC2-208ENST00000586737 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
ERCC2-208ENST00000586737 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
ERCC2-208ENST00000586737 CFTRP13569 1480 aa24.06■■□□□ 1.44
ERCC2-208ENST00000586737 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
ERCC2-208ENST00000586737 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
ERCC2-208ENST00000586737 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
ERCC2-208ENST00000586737 WDR62O43379 1518 aa23.92■■□□□ 1.42
ERCC2-208ENST00000586737 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
ERCC2-208ENST00000586737 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
ERCC2-208ENST00000586737 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
ERCC2-208ENST00000586737 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
ERCC2-208ENST00000586737 IFT140Q96RY7 1462 aa23.47■■□□□ 1.35
ERCC2-208ENST00000586737 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
ERCC2-208ENST00000586737 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
ERCC2-208ENST00000586737 SUPT5HO00267 1087 aaKnown RBP23.45■■□□□ 1.34
ERCC2-208ENST00000586737 DNMBPQ6XZF7 1577 aa23.43■■□□□ 1.34
ERCC2-208ENST00000586737 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
ERCC2-208ENST00000586737 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.33
ERCC2-208ENST00000586737 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
ERCC2-208ENST00000586737 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.327e-11■■■■■ 54.3
ERCC2-208ENST00000586737 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
ERCC2-208ENST00000586737 CUX1P39880 1505 aa23.23■■□□□ 1.31
ERCC2-208ENST00000586737 SOGA1O94964 1423 aa23.23■■□□□ 1.31
ERCC2-208ENST00000586737 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
ERCC2-208ENST00000586737 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.3
ERCC2-208ENST00000586737 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
ERCC2-208ENST00000586737 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
ERCC2-208ENST00000586737 FBLN2P98095 1184 aa23.01■■□□□ 1.27
ERCC2-208ENST00000586737 WDR97A6NE52 1622 aa23■■□□□ 1.27
ERCC2-208ENST00000586737 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
ERCC2-208ENST00000586737 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
ERCC2-208ENST00000586737 ABCA10Q8WWZ4 1543 aa22.97■■□□□ 1.27
ERCC2-208ENST00000586737 ARHGEF11O15085 1522 aa22.95■■□□□ 1.26
ERCC2-208ENST00000586737 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.26
ERCC2-208ENST00000586737 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
ERCC2-208ENST00000586737 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
ERCC2-208ENST00000586737 RIMBP3Q9UFD9 1639 aa22.94■■□□□ 1.26
ERCC2-208ENST00000586737 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
ERCC2-208ENST00000586737 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
ERCC2-208ENST00000586737 CHD1O14646 1710 aa22.92■■□□□ 1.26
ERCC2-208ENST00000586737 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
ERCC2-208ENST00000586737 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
ERCC2-208ENST00000586737 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
ERCC2-208ENST00000586737 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
ERCC2-208ENST00000586737 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
ERCC2-208ENST00000586737 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
ERCC2-208ENST00000586737 CLASP1Q7Z460 1538 aa22.81■■□□□ 1.24
ERCC2-208ENST00000586737 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
ERCC2-208ENST00000586737 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
ERCC2-208ENST00000586737 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
ERCC2-208ENST00000586737 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
ERCC2-208ENST00000586737 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
ERCC2-208ENST00000586737 ADAMTS12P58397 1594 aa22.66■■□□□ 1.22
ERCC2-208ENST00000586737 NUP160Q12769 1436 aa22.65■■□□□ 1.22
ERCC2-208ENST00000586737 ERICH3Q5RHP9 1530 aa22.64■■□□□ 1.21
ERCC2-208ENST00000586737 CEP170Q5SW79 1584 aa22.58■■□□□ 1.2
ERCC2-208ENST00000586737 IGF1RP08069 1367 aa22.52■■□□□ 1.2
ERCC2-208ENST00000586737 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
ERCC2-208ENST00000586737 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
ERCC2-208ENST00000586737 SHROOM2Q13796 1616 aa22.42■■□□□ 1.18
ERCC2-208ENST00000586737 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
ERCC2-208ENST00000586737 JPH4Q96JJ6 628 aa22.41■■□□□ 1.18
ERCC2-208ENST00000586737 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms