RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 FAM135AQ9P2D6 1515 aa24.18■■□□□ 1.46
SF3A2-202ENST00000586396 CPS1P31327 1500 aa24.15■■□□□ 1.46
SF3A2-202ENST00000586396 PZPP20742 1482 aa24.15■■□□□ 1.46
SF3A2-202ENST00000586396 CCDC141Q6ZP82 1450 aa24.15■■□□□ 1.46
SF3A2-202ENST00000586396 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
SF3A2-202ENST00000586396 DHX29Q7Z478 1369 aaKnown RBP24.15■■□□□ 1.46
SF3A2-202ENST00000586396 TNRQ92752 1358 aa24.14■■□□□ 1.45
SF3A2-202ENST00000586396 CAMSAP2Q08AD1 1489 aa24.13■■□□□ 1.45
SF3A2-202ENST00000586396 SCAF1Q9H7N4 1312 aaKnown RBP24.12■■□□□ 1.45
SF3A2-202ENST00000586396 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
SF3A2-202ENST00000586396 SHANK2Q9UPX8 1470 aa24.09■■□□□ 1.45
SF3A2-202ENST00000586396 KIF3BO15066 747 aa24.08■■□□□ 1.45
SF3A2-202ENST00000586396 FBXO31Q5XUX0 539 aaPredicted RBP24.07■■□□□ 1.44
SF3A2-202ENST00000586396 UGGT1Q9NYU2 1555 aa24.07■■□□□ 1.44
SF3A2-202ENST00000586396 NLRP1Q9C000 1473 aa24.07■■□□□ 1.44
SF3A2-202ENST00000586396 DEPDC5O75140 1603 aa24.06■■□□□ 1.44
SF3A2-202ENST00000586396 PIP4K2BP78356 416 aa24.06■■□□□ 1.44
SF3A2-202ENST00000586396 VWDEQ8N2E2 1590 aa24.06■■□□□ 1.44
SF3A2-202ENST00000586396 NCOA2Q15596 1464 aa24.06■■□□□ 1.44
SF3A2-202ENST00000586396 IQGAP1P46940 1657 aa24.05■■□□□ 1.44
SF3A2-202ENST00000586396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.04■■□□□ 1.443e-8■■□□□ 12.1
SF3A2-202ENST00000586396 ARHGEF5Q12774 1597 aa24.04■■□□□ 1.44
SF3A2-202ENST00000586396 ZC3H13Q5T200 1668 aaKnown RBP24.04■■□□□ 1.44
SF3A2-202ENST00000586396 WASHC2CQ9Y4E1 1318 aa24.04■■□□□ 1.44
SF3A2-202ENST00000586396 TOM1O60784 492 aa24.03■■□□□ 1.44
SF3A2-202ENST00000586396 HSPA1LP34931 641 aa24.03■■□□□ 1.44
SF3A2-202ENST00000586396 RNF17Q9BXT8 1623 aaKnown RBP24.02■■□□□ 1.44
SF3A2-202ENST00000586396 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
SF3A2-202ENST00000586396 ANKLE2Q86XL3 938 aa24■■□□□ 1.43
SF3A2-202ENST00000586396 MED14O60244 1454 aa24■■□□□ 1.43
SF3A2-202ENST00000586396 NPHP4O75161 1426 aaPredicted RBP23.99■■□□□ 1.43
SF3A2-202ENST00000586396 THEMISQ8N1K5 641 aaPredicted RBP23.98■■□□□ 1.43
SF3A2-202ENST00000586396 SYNMO15061 1565 aa23.98■■□□□ 1.43
SF3A2-202ENST00000586396 ALKQ9UM73 1620 aa23.96■■□□□ 1.43
SF3A2-202ENST00000586396 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
SF3A2-202ENST00000586396 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.43
SF3A2-202ENST00000586396 ABCC3O15438 1527 aa23.95■■□□□ 1.43
SF3A2-202ENST00000586396 STRCP1A6NGW2 1772 aa23.95■■□□□ 1.42
SF3A2-202ENST00000586396 MAST1Q9Y2H9 1570 aa23.93■■□□□ 1.42
SF3A2-202ENST00000586396 CEP152O94986 1710 aa23.93■■□□□ 1.42
SF3A2-202ENST00000586396 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
SF3A2-202ENST00000586396 TSPY4P0CV99 314 aa23.9■■□□□ 1.42
SF3A2-202ENST00000586396 TSPY10P0CW01 314 aa23.9■■□□□ 1.42
SF3A2-202ENST00000586396 UBR1Q8IWV7 1749 aa23.9■■□□□ 1.42
SF3A2-202ENST00000586396 ERVK-7P63135 1459 aa23.89■■□□□ 1.42
SF3A2-202ENST00000586396 MROH1Q8NDA8 1641 aa23.89■■□□□ 1.42
SF3A2-202ENST00000586396 MAP3K1Q13233 1512 aa23.89■■□□□ 1.41
SF3A2-202ENST00000586396 PHF23Q9BUL5 403 aaPredicted RBP23.88■■□□□ 1.41
SF3A2-202ENST00000586396 LRRC7Q96NW7 1537 aa23.87■■□□□ 1.41
SF3A2-202ENST00000586396 CFAP65Q6ZU64 1925 aaKnown RBP23.86■■□□□ 1.41
SF3A2-202ENST00000586396 LRRC9Q6ZRR7 1453 aa23.84■■□□□ 1.41
SF3A2-202ENST00000586396 SCAF11Q99590 1463 aaKnown RBP23.81■■□□□ 1.4
SF3A2-202ENST00000586396 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
SF3A2-202ENST00000586396 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
SF3A2-202ENST00000586396 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
SF3A2-202ENST00000586396 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
SF3A2-202ENST00000586396 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
SF3A2-202ENST00000586396 XIRP1Q702N8 1843 aaKnown RBP23.77■■□□□ 1.4
SF3A2-202ENST00000586396 SLIT1O75093 1534 aa23.76■■□□□ 1.39
SF3A2-202ENST00000586396 MYOM3Q5VTT5 1437 aa23.75■■□□□ 1.39
SF3A2-202ENST00000586396 ARHGAP23Q9P227 1491 aa23.74■■□□□ 1.39
SF3A2-202ENST00000586396 PIK3C2BO00750 1634 aa23.73■■□□□ 1.39
SF3A2-202ENST00000586396 ARHGAP31Q2M1Z3 1444 aa23.69■■□□□ 1.38
SF3A2-202ENST00000586396 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
SF3A2-202ENST00000586396 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
SF3A2-202ENST00000586396 KDM5AP29375 1690 aaKnown RBP23.67■■□□□ 1.38
SF3A2-202ENST00000586396 LTKP29376 864 aa23.66■■□□□ 1.38
SF3A2-202ENST00000586396 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
SF3A2-202ENST00000586396 EID1Q9Y6B2 187 aa23.65■■□□□ 1.38
SF3A2-202ENST00000586396 PTPN23Q9H3S7 1636 aa23.64■■□□□ 1.38
SF3A2-202ENST00000586396 KANK4Q5T7N3 995 aaPredicted RBP23.63■■□□□ 1.37
SF3A2-202ENST00000586396 EFCAB6Q5THR3 1501 aa23.62■■□□□ 1.37
SF3A2-202ENST00000586396 TMEM2Q9UHN6 1383 aa23.61■■□□□ 1.37
SF3A2-202ENST00000586396 ROBO1Q9Y6N7 1651 aa23.6■■□□□ 1.37
SF3A2-202ENST00000586396 KANK1Q14678 1352 aa23.59■■□□□ 1.37
SF3A2-202ENST00000586396 ABCC5O15440 1437 aa23.59■■□□□ 1.37
SF3A2-202ENST00000586396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.58■■□□□ 1.372e-6■□□□□ 10.4
SF3A2-202ENST00000586396 STAG3Q9UJ98 1225 aa23.58■■□□□ 1.37
SF3A2-202ENST00000586396 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
SF3A2-202ENST00000586396 DAPK1P53355 1430 aa23.57■■□□□ 1.36
SF3A2-202ENST00000586396 FAM135BQ49AJ0 1406 aa23.57■■□□□ 1.36
SF3A2-202ENST00000586396 ADGRB3O60242 1522 aa23.56■■□□□ 1.36
SF3A2-202ENST00000586396 LMTK2Q8IWU2 1503 aa23.56■■□□□ 1.36
SF3A2-202ENST00000586396 TMEM94Q12767 1356 aa23.55■■□□□ 1.36
SF3A2-202ENST00000586396 RGS17Q9UGC6 210 aaPredicted RBP23.55■■□□□ 1.36
SF3A2-202ENST00000586396 NWD1Q149M9 1564 aa23.54■■□□□ 1.36
SF3A2-202ENST00000586396 TET3O43151 1660 aa23.52■■□□□ 1.36
SF3A2-202ENST00000586396 NKTRP30414 1462 aaKnown RBP23.52■■□□□ 1.36
SF3A2-202ENST00000586396 FGD6Q6ZV73 1430 aa23.49■■□□□ 1.35
SF3A2-202ENST00000586396 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
SF3A2-202ENST00000586396 PHLPP1O60346 1717 aa23.47■■□□□ 1.35
SF3A2-202ENST00000586396 KCNA6P17658 529 aa23.47■■□□□ 1.35
SF3A2-202ENST00000586396 SLC26A8Q96RN1 970 aa23.47■■□□□ 1.35
SF3A2-202ENST00000586396 IDI1Q13907 227 aa23.46■■□□□ 1.35
SF3A2-202ENST00000586396 MYO5BQ9ULV0 1848 aa23.46■■□□□ 1.35
SF3A2-202ENST00000586396 GCC2Q8IWJ2 1684 aa23.45■■□□□ 1.34
SF3A2-202ENST00000586396 NOS1P29475 1434 aa23.45■■□□□ 1.34
SF3A2-202ENST00000586396 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
SF3A2-202ENST00000586396 SETD1AO15047 1707 aaKnown RBP23.45■■□□□ 1.34
SF3A2-202ENST00000586396 MSH6P52701 1360 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms