RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 TSPY4P0CV99 314 aa22.23■■□□□ 1.15
HDAC5-203ENST00000586339 TSPY10P0CW01 314 aa22.23■■□□□ 1.15
HDAC5-203ENST00000586339 RNF17Q9BXT8 1623 aaKnown RBP22.22■■□□□ 1.15
HDAC5-203ENST00000586339 EIF2AK4Q9P2K8 1649 aaKnown RBP22.21■■□□□ 1.15
HDAC5-203ENST00000586339 KIF3BO15066 747 aa22.21■■□□□ 1.15
HDAC5-203ENST00000586339 KANK4Q5T7N3 995 aaPredicted RBP22.21■■□□□ 1.15
HDAC5-203ENST00000586339 PZPP20742 1482 aa22.2■■□□□ 1.14
HDAC5-203ENST00000586339 A2ML1A8K2U0 1454 aa22.19■■□□□ 1.14
HDAC5-203ENST00000586339 ZC3H13Q5T200 1668 aaKnown RBP22.19■■□□□ 1.14
HDAC5-203ENST00000586339 LTBP4Q8N2S1 1624 aa22.17■■□□□ 1.14
HDAC5-203ENST00000586339 TCOF1Q13428 1488 aaKnown RBP22.17■■□□□ 1.14
HDAC5-203ENST00000586339 CROCC2H7BZ55 1655 aa22.17■■□□□ 1.14
HDAC5-203ENST00000586339 DNMT1P26358 1616 aaKnown RBP22.17■■□□□ 1.14
HDAC5-203ENST00000586339 IQSEC2Q5JU85 1478 aa22.16■■□□□ 1.14
HDAC5-203ENST00000586339 PKD2Q13563 968 aa22.14■■□□□ 1.13
HDAC5-203ENST00000586339 POLR1AO95602 1720 aaPredicted RBP22.14■■□□□ 1.13
HDAC5-203ENST00000586339 TNRQ92752 1358 aa22.13■■□□□ 1.13
HDAC5-203ENST00000586339 WASHC2CQ9Y4E1 1318 aa22.13■■□□□ 1.13
HDAC5-203ENST00000586339 SHANK2Q9UPX8 1470 aa22.13■■□□□ 1.13
HDAC5-203ENST00000586339 PTPN23Q9H3S7 1636 aa22.13■■□□□ 1.13
HDAC5-203ENST00000586339 APLP2Q06481 763 aa22.12■■□□□ 1.13
HDAC5-203ENST00000586339 DUOX2Q9NRD8 1548 aa22.11■■□□□ 1.13
HDAC5-203ENST00000586339 ABCC3O15438 1527 aa22.1■■□□□ 1.13
HDAC5-203ENST00000586339 MROH1Q8NDA8 1641 aa22.09■■□□□ 1.13
HDAC5-203ENST00000586339 NLRP1Q9C000 1473 aa22.09■■□□□ 1.13
HDAC5-203ENST00000586339 NCKAP5LQ9HCH0 1330 aa22.09■■□□□ 1.13
HDAC5-203ENST00000586339 CEP152O94986 1710 aa22.06■■□□□ 1.12
HDAC5-203ENST00000586339 FBXO31Q5XUX0 539 aaPredicted RBP22.06■■□□□ 1.12
HDAC5-203ENST00000586339 SPATA31D1Q6ZQQ2 1576 aa22.05■■□□□ 1.12
HDAC5-203ENST00000586339 FGD6Q6ZV73 1430 aa22.05■■□□□ 1.12
HDAC5-203ENST00000586339 PRDM15P57071 1507 aaPredicted RBP22.04■■□□□ 1.12
HDAC5-203ENST00000586339 ABCC5O15440 1437 aa22.04■■□□□ 1.12
HDAC5-203ENST00000586339 ERBINQ96RT1 1412 aa22.04■■□□□ 1.12
HDAC5-203ENST00000586339 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
HDAC5-203ENST00000586339 UGGT1Q9NYU2 1555 aa22.03■■□□□ 1.12
HDAC5-203ENST00000586339 CFAP65Q6ZU64 1925 aaKnown RBP22.02■■□□□ 1.12
HDAC5-203ENST00000586339 KIF15Q9NS87 1388 aa22.02■■□□□ 1.12
HDAC5-203ENST00000586339 DAPK1P53355 1430 aa22.02■■□□□ 1.12
HDAC5-203ENST00000586339 DEPDC5O75140 1603 aa22.01■■□□□ 1.11
HDAC5-203ENST00000586339 ERVK-7P63135 1459 aa22■■□□□ 1.11
HDAC5-203ENST00000586339 ZNF335Q9H4Z2 1342 aaPredicted RBP22■■□□□ 1.11
HDAC5-203ENST00000586339 THEMISQ8N1K5 641 aaPredicted RBP21.97■■□□□ 1.11
HDAC5-203ENST00000586339 ARHGAP31Q2M1Z3 1444 aa21.96■■□□□ 1.11
HDAC5-203ENST00000586339 MED14O60244 1454 aa21.96■■□□□ 1.11
HDAC5-203ENST00000586339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.95■■□□□ 1.1
HDAC5-203ENST00000586339 ANKLE2Q86XL3 938 aa21.94■■□□□ 1.1
HDAC5-203ENST00000586339 CPS1P31327 1500 aa21.93■■□□□ 1.1
HDAC5-203ENST00000586339 IQGAP1P46940 1657 aa21.93■■□□□ 1.1
HDAC5-203ENST00000586339 UBR1Q8IWV7 1749 aa21.93■■□□□ 1.1
HDAC5-203ENST00000586339 ANKRD30AQ9BXX3 1397 aa21.93■■□□□ 1.1
HDAC5-203ENST00000586339 RRP7BPQ9NSQ0 103 aa21.91■■□□□ 1.1
HDAC5-203ENST00000586339 ADGRL2O95490 1459 aa21.9■■□□□ 1.1
HDAC5-203ENST00000586339 NPHP4O75161 1426 aaPredicted RBP21.89■■□□□ 1.1
HDAC5-203ENST00000586339 VWDEQ8N2E2 1590 aa21.89■■□□□ 1.09
HDAC5-203ENST00000586339 LMTK2Q8IWU2 1503 aa21.89■■□□□ 1.09
HDAC5-203ENST00000586339 KANK1Q14678 1352 aa21.88■■□□□ 1.09
HDAC5-203ENST00000586339 KDM5AP29375 1690 aaKnown RBP21.86■■□□□ 1.09
HDAC5-203ENST00000586339 SLIT1O75093 1534 aa21.84■■□□□ 1.09
HDAC5-203ENST00000586339 UBAP1LF5GYI3 381 aa21.83■■□□□ 1.09
HDAC5-203ENST00000586339 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
HDAC5-203ENST00000586339 EFCAB6Q5THR3 1501 aa21.82■■□□□ 1.08
HDAC5-203ENST00000586339 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
HDAC5-203ENST00000586339 PIK3C2BO00750 1634 aa21.81■■□□□ 1.08
HDAC5-203ENST00000586339 SCAF11Q99590 1463 aaKnown RBP21.81■■□□□ 1.08
HDAC5-203ENST00000586339 SYNMO15061 1565 aa21.81■■□□□ 1.08
HDAC5-203ENST00000586339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.08
HDAC5-203ENST00000586339 STRCP1A6NGW2 1772 aa21.79■■□□□ 1.08
HDAC5-203ENST00000586339 FAM50AQ14320 339 aaKnown RBP21.77■■□□□ 1.08
HDAC5-203ENST00000586339 ANKRD50Q9ULJ7 1429 aa21.77■■□□□ 1.08
HDAC5-203ENST00000586339 RPRD2Q5VT52 1461 aaKnown RBP21.75■■□□□ 1.07
HDAC5-203ENST00000586339 TET3O43151 1660 aa21.75■■□□□ 1.07
HDAC5-203ENST00000586339 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
HDAC5-203ENST00000586339 NOS1P29475 1434 aa21.74■■□□□ 1.07
HDAC5-203ENST00000586339 GCC2Q8IWJ2 1684 aa21.73■■□□□ 1.07
HDAC5-203ENST00000586339 TOM1O60784 492 aa21.73■■□□□ 1.07
HDAC5-203ENST00000586339 UNC13BO14795 1591 aa21.73■■□□□ 1.07
HDAC5-203ENST00000586339 TMEM2Q9UHN6 1383 aa21.72■■□□□ 1.07
HDAC5-203ENST00000586339 ADGRB3O60242 1522 aa21.71■■□□□ 1.07
HDAC5-203ENST00000586339 EID1Q9Y6B2 187 aa21.71■■□□□ 1.07
HDAC5-203ENST00000586339 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.07
HDAC5-203ENST00000586339 LTKP29376 864 aa21.7■■□□□ 1.06
HDAC5-203ENST00000586339 ROCK1Q13464 1354 aa21.7■■□□□ 1.06
HDAC5-203ENST00000586339 TXNDC2Q86VQ3 553 aa21.69■■□□□ 1.06
HDAC5-203ENST00000586339 STAG3Q9UJ98 1225 aa21.68■■□□□ 1.06
HDAC5-203ENST00000586339 ALKQ9UM73 1620 aa21.67■■□□□ 1.06
HDAC5-203ENST00000586339 IDI1Q13907 227 aa21.67■■□□□ 1.06
HDAC5-203ENST00000586339 SLC52A1Q9NWF4 448 aa21.66■■□□□ 1.06
HDAC5-203ENST00000586339 XIRP1Q702N8 1843 aaKnown RBP21.65■■□□□ 1.06
HDAC5-203ENST00000586339 MYO5BQ9ULV0 1848 aa21.65■■□□□ 1.06
HDAC5-203ENST00000586339 IQGAP3Q86VI3 1631 aa21.65■■□□□ 1.06
HDAC5-203ENST00000586339 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
HDAC5-203ENST00000586339 PIP4K2BP78356 416 aa21.62■■□□□ 1.05
HDAC5-203ENST00000586339 E9PCH4 1651 aa21.62■■□□□ 1.05
HDAC5-203ENST00000586339 TMEM131LA2VDJ0 1609 aa21.58■■□□□ 1.05
HDAC5-203ENST00000586339 HSPA1LP34931 641 aa21.57■■□□□ 1.04
HDAC5-203ENST00000586339 NWD1Q149M9 1564 aa21.57■■□□□ 1.04
HDAC5-203ENST00000586339 ILDR2Q71H61 639 aa21.56■■□□□ 1.04
HDAC5-203ENST00000586339 ZFYVE9O95405 1425 aa21.55■■□□□ 1.04
HDAC5-203ENST00000586339 MED1Q15648 1581 aaPredicted RBP21.54■■□□□ 1.04
HDAC5-203ENST00000586339 NKTRP30414 1462 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms