RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
HDAC5-203ENST00000586339 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
HDAC5-203ENST00000586339 ABCC9O60706 1549 aa31.33■■■□□ 2.61
HDAC5-203ENST00000586339 RB1CC1Q8TDY2 1594 aa30■■■□□ 2.39
HDAC5-203ENST00000586339 NACADO15069 1562 aa29.84■■■□□ 2.37
HDAC5-203ENST00000586339 MYO15BQ96JP2 1530 aa29.52■■■□□ 2.32
HDAC5-203ENST00000586339 DCAF8L2P0C7V8 631 aa29.45■■■□□ 2.31
HDAC5-203ENST00000586339 UNC13AQ9UPW8 1703 aa29.37■■■□□ 2.29
HDAC5-203ENST00000586339 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
HDAC5-203ENST00000586339 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
HDAC5-203ENST00000586339 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
HDAC5-203ENST00000586339 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.256e-15■■■□□ 15.8
HDAC5-203ENST00000586339 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
HDAC5-203ENST00000586339 SHROOM4Q9ULL8 1493 aa28.84■■■□□ 2.21
HDAC5-203ENST00000586339 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
HDAC5-203ENST00000586339 CC2D2AQ9P2K1 1620 aa28.38■■■□□ 2.13
HDAC5-203ENST00000586339 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
HDAC5-203ENST00000586339 CECR2Q9BXF3 1484 aa28.24■■■□□ 2.11
HDAC5-203ENST00000586339 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
HDAC5-203ENST00000586339 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
HDAC5-203ENST00000586339 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
HDAC5-203ENST00000586339 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
HDAC5-203ENST00000586339 HMGXB3Q12766 1538 aa27.37■■□□□ 1.97
HDAC5-203ENST00000586339 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
HDAC5-203ENST00000586339 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
HDAC5-203ENST00000586339 BAZ1BQ9UIG0 1483 aaKnown RBP27.17■■□□□ 1.94
HDAC5-203ENST00000586339 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
HDAC5-203ENST00000586339 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
HDAC5-203ENST00000586339 CUX2O14529 1486 aa27.06■■□□□ 1.92
HDAC5-203ENST00000586339 NESP48681 1621 aa26.95■■□□□ 1.91
HDAC5-203ENST00000586339 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
HDAC5-203ENST00000586339 WIZO95785 1651 aa26.79■■□□□ 1.88
HDAC5-203ENST00000586339 DNAJC5Q9H3Z4 198 aa26.77■■□□□ 1.88
HDAC5-203ENST00000586339 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
HDAC5-203ENST00000586339 KIF21AQ7Z4S6 1674 aa26.72■■□□□ 1.87
HDAC5-203ENST00000586339 PDS5BQ9NTI5 1447 aa26.69■■□□□ 1.86
HDAC5-203ENST00000586339 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
HDAC5-203ENST00000586339 RSF1Q96T23 1441 aaPredicted RBP26.57■■□□□ 1.84
HDAC5-203ENST00000586339 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
HDAC5-203ENST00000586339 MRC2Q9UBG0 1479 aa26.46■■□□□ 1.83
HDAC5-203ENST00000586339 WDR62O43379 1518 aa26.43■■□□□ 1.82
HDAC5-203ENST00000586339 CFTRP13569 1480 aa26.39■■□□□ 1.82
HDAC5-203ENST00000586339 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
HDAC5-203ENST00000586339 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
HDAC5-203ENST00000586339 PRDM2Q13029 1718 aa26.29■■□□□ 1.8
HDAC5-203ENST00000586339 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
HDAC5-203ENST00000586339 URB2Q14146 1524 aaKnown RBP26.11■■□□□ 1.77
HDAC5-203ENST00000586339 ABCC8Q09428 1581 aa25.88■■□□□ 1.73
HDAC5-203ENST00000586339 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
HDAC5-203ENST00000586339 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
HDAC5-203ENST00000586339 DNMBPQ6XZF7 1577 aa25.83■■□□□ 1.73
HDAC5-203ENST00000586339 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
HDAC5-203ENST00000586339 OSCARQ8IYS5 282 aa25.73■■□□□ 1.71
HDAC5-203ENST00000586339 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
HDAC5-203ENST00000586339 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
HDAC5-203ENST00000586339 POLA1P09884 1462 aaPredicted RBP25.61■■□□□ 1.69
HDAC5-203ENST00000586339 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
HDAC5-203ENST00000586339 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
HDAC5-203ENST00000586339 CHD1O14646 1710 aa25.49■■□□□ 1.67
HDAC5-203ENST00000586339 AQRO60306 1485 aaKnown RBP eCLIP25.49■■□□□ 1.672e-16■■■■■ 34.1
HDAC5-203ENST00000586339 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
HDAC5-203ENST00000586339 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
HDAC5-203ENST00000586339 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
HDAC5-203ENST00000586339 CUX1P39880 1505 aa25.46■■□□□ 1.67
HDAC5-203ENST00000586339 FGD5Q6ZNL6 1462 aa25.46■■□□□ 1.67
HDAC5-203ENST00000586339 SOGA1O94964 1423 aa25.46■■□□□ 1.67
HDAC5-203ENST00000586339 RAD54L2Q9Y4B4 1467 aa25.45■■□□□ 1.66
HDAC5-203ENST00000586339 ARHGEF11O15085 1522 aa25.39■■□□□ 1.66
HDAC5-203ENST00000586339 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
HDAC5-203ENST00000586339 TDRD9Q8NDG6 1382 aaKnown RBP25.34■■□□□ 1.65
HDAC5-203ENST00000586339 SNAPC4Q5SXM2 1469 aa25.29■■□□□ 1.64
HDAC5-203ENST00000586339 MAGI1Q96QZ7 1491 aaPredicted RBP25.29■■□□□ 1.64
HDAC5-203ENST00000586339 GRIN2BQ13224 1484 aa25.27■■□□□ 1.64
HDAC5-203ENST00000586339 PBRM1Q86U86 1689 aa25.25■■□□□ 1.63
HDAC5-203ENST00000586339 FBLN2P98095 1184 aa25.24■■□□□ 1.63
HDAC5-203ENST00000586339 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
HDAC5-203ENST00000586339 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
HDAC5-203ENST00000586339 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
HDAC5-203ENST00000586339 GAPVD1Q14C86 1478 aa25.19■■□□□ 1.62
HDAC5-203ENST00000586339 CLASP1Q7Z460 1538 aa25.18■■□□□ 1.62
HDAC5-203ENST00000586339 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
HDAC5-203ENST00000586339 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
HDAC5-203ENST00000586339 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
HDAC5-203ENST00000586339 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
HDAC5-203ENST00000586339 ARAP1Q96P48 1450 aa25.13■■□□□ 1.61
HDAC5-203ENST00000586339 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
HDAC5-203ENST00000586339 CYB5RLQ6IPT4 315 aa25.07■■□□□ 1.6
HDAC5-203ENST00000586339 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
HDAC5-203ENST00000586339 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
HDAC5-203ENST00000586339 ERICH3Q5RHP9 1530 aa24.92■■□□□ 1.58
HDAC5-203ENST00000586339 FHAD1B1AJZ9 1412 aa24.88■■□□□ 1.57
HDAC5-203ENST00000586339 NUP160Q12769 1436 aa24.87■■□□□ 1.57
HDAC5-203ENST00000586339 CEP170Q5SW79 1584 aa24.85■■□□□ 1.57
HDAC5-203ENST00000586339 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
HDAC5-203ENST00000586339 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
HDAC5-203ENST00000586339 ERCC6L2Q5T890 1561 aa24.71■■□□□ 1.55
HDAC5-203ENST00000586339 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
HDAC5-203ENST00000586339 CUL7Q14999 1698 aa24.62■■□□□ 1.53
HDAC5-203ENST00000586339 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
HDAC5-203ENST00000586339 PRG4Q92954 1404 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms