RNA–Protein interactions for RNA: ENST00000585475.5

MRPL38-216, Transcript of mitochondrial ribosomal protein L38, human

TSL 5

Gene MRPL38, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL38-216	ENST00000585475	PTPRT	O14522	1441 aa		32.96	■■■□□ 2.87
MRPL38-216	ENST00000585475	ABCC5	O15440	1437 aa		32.96	■■■□□ 2.87
MRPL38-216	ENST00000585475	PTPN23	Q9H3S7	1636 aa		32.96	■■■□□ 2.87
MRPL38-216	ENST00000585475	TCOF1	Q13428	1488 aa	Known RBP	32.94	■■■□□ 2.86
MRPL38-216	ENST00000585475	MYO3A	Q8NEV4	1616 aa		32.94	■■■□□ 2.86
MRPL38-216	ENST00000585475	CERK	Q8TCT0	537 aa		32.93	■■■□□ 2.86
MRPL38-216	ENST00000585475	PZP	P20742	1482 aa		32.93	■■■□□ 2.86
MRPL38-216	ENST00000585475	CAMSAP1	Q5T5Y3	1602 aa		32.92	■■■□□ 2.86
MRPL38-216	ENST00000585475	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.92	■■■□□ 2.86
MRPL38-216	ENST00000585475	SHANK2	Q9UPX8	1470 aa		32.92	■■■□□ 2.86
MRPL38-216	ENST00000585475	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.9	■■■□□ 2.86
MRPL38-216	ENST00000585475	RNF17	Q9BXT8	1623 aa	Known RBP	32.9	■■■□□ 2.86
MRPL38-216	ENST00000585475	ZNF142	P52746	1687 aa	Predicted RBP	32.89	■■■□□ 2.86
MRPL38-216	ENST00000585475	DUOX2	Q9NRD8	1548 aa		32.88	■■■□□ 2.85
MRPL38-216	ENST00000585475	DAPK1	P53355	1430 aa		32.88	■■■□□ 2.85
MRPL38-216	ENST00000585475	TNR	Q92752	1358 aa		32.87	■■■□□ 2.85
MRPL38-216	ENST00000585475	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.87	■■■□□ 2.85
MRPL38-216	ENST00000585475	KIF15	Q9NS87	1388 aa		32.86	■■■□□ 2.85
MRPL38-216	ENST00000585475	A2ML1	A8K2U0	1454 aa		32.85	■■■□□ 2.85
MRPL38-216	ENST00000585475	PLA2R1	Q13018	1463 aa		32.85	■■■□□ 2.85
MRPL38-216	ENST00000585475	RRP7BP	Q9NSQ0	103 aa		32.84	■■■□□ 2.85
MRPL38-216	ENST00000585475	DNMT1	P26358	1616 aa	Known RBP	32.84	■■■□□ 2.85
MRPL38-216	ENST00000585475	NCKAP5L	Q9HCH0	1330 aa		32.83	■■■□□ 2.85
MRPL38-216	ENST00000585475	CROCC2	H7BZ55	1655 aa		32.83	■■■□□ 2.85
MRPL38-216	ENST00000585475	ABCC3	O15438	1527 aa		32.82	■■■□□ 2.85
MRPL38-216	ENST00000585475	MROH1	Q8NDA8	1641 aa		32.8	■■■□□ 2.84
MRPL38-216	ENST00000585475	PKD2	Q13563	968 aa		32.8	■■■□□ 2.84
MRPL38-216	ENST00000585475	ERBIN	Q96RT1	1412 aa		32.79	■■■□□ 2.84
MRPL38-216	ENST00000585475	CHIC2	Q9UKJ5	165 aa		32.76	■■■□□ 2.83
MRPL38-216	ENST00000585475	ZC3H13	Q5T200	1668 aa	Known RBP	32.75	■■■□□ 2.83
MRPL38-216	ENST00000585475	ANKRD30A	Q9BXX3	1397 aa		32.74	■■■□□ 2.83
MRPL38-216	ENST00000585475	NLRP1	Q9C000	1473 aa		32.73	■■■□□ 2.83
MRPL38-216	ENST00000585475	FAM50A	Q14320	339 aa	Known RBP	32.71	■■■□□ 2.83
MRPL38-216	ENST00000585475	LTBP4	Q8N2S1	1624 aa		32.69	■■■□□ 2.82
MRPL38-216	ENST00000585475	PRDM15	P57071	1507 aa	Predicted RBP	32.69	■■■□□ 2.82
MRPL38-216	ENST00000585475	SPATA31D1	Q6ZQQ2	1576 aa		32.69	■■■□□ 2.82
MRPL38-216	ENST00000585475	ERVK-7	P63135	1459 aa		32.67	■■■□□ 2.82
MRPL38-216	ENST00000585475	ADGRL2	O95490	1459 aa		32.66	■■■□□ 2.82
MRPL38-216	ENST00000585475	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.65	■■■□□ 2.82
MRPL38-216	ENST00000585475	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.64	■■■□□ 2.82	5e-7	■□□□□ 10.9
MRPL38-216	ENST00000585475	CEP152	O94986	1710 aa		32.63	■■■□□ 2.81
MRPL38-216	ENST00000585475	ARHGAP31	Q2M1Z3	1444 aa		32.63	■■■□□ 2.81
MRPL38-216	ENST00000585475	UGGT1	Q9NYU2	1555 aa		32.62	■■■□□ 2.81
MRPL38-216	ENST00000585475	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.62	■■■□□ 2.81
MRPL38-216	ENST00000585475	DEPDC5	O75140	1603 aa		32.62	■■■□□ 2.81
MRPL38-216	ENST00000585475	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.61	■■■□□ 2.81
MRPL38-216	ENST00000585475	KANK1	Q14678	1352 aa		32.58	■■■□□ 2.81
MRPL38-216	ENST00000585475	ANKLE2	Q86XL3	938 aa		32.58	■■■□□ 2.81
MRPL38-216	ENST00000585475	NEURL4	Q96JN8	1562 aa		32.56	■■■□□ 2.8
MRPL38-216	ENST00000585475	IQSEC2	Q5JU85	1478 aa		32.54	■■■□□ 2.8
MRPL38-216	ENST00000585475	VWDE	Q8N2E2	1590 aa		32.53	■■■□□ 2.8
MRPL38-216	ENST00000585475	LMTK2	Q8IWU2	1503 aa		32.53	■■■□□ 2.8
MRPL38-216	ENST00000585475	ANKRD50	Q9ULJ7	1429 aa		32.51	■■■□□ 2.8
MRPL38-216	ENST00000585475	POLR1A	O95602	1720 aa	Predicted RBP	32.5	■■■□□ 2.79
MRPL38-216	ENST00000585475	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.49	■■■□□ 2.79
MRPL38-216	ENST00000585475	MED14	O60244	1454 aa		32.48	■■■□□ 2.79
MRPL38-216	ENST00000585475	NPHP4	O75161	1426 aa	Predicted RBP	32.45	■■■□□ 2.79
MRPL38-216	ENST00000585475	CFAP65	Q6ZU64	1925 aa	Known RBP	32.44	■■■□□ 2.78
MRPL38-216	ENST00000585475	ROCK1	Q13464	1354 aa		32.43	■■■□□ 2.78
MRPL38-216	ENST00000585475	UBR1	Q8IWV7	1749 aa		32.4	■■■□□ 2.78
MRPL38-216	ENST00000585475	EFCAB6	Q5THR3	1501 aa		32.39	■■■□□ 2.78
MRPL38-216	ENST00000585475	NOS1	P29475	1434 aa		32.37	■■■□□ 2.77
MRPL38-216	ENST00000585475	ARHGAP23	Q9P227	1491 aa		32.36	■■■□□ 2.77
MRPL38-216	ENST00000585475	IDI1	Q13907	227 aa		32.36	■■■□□ 2.77
MRPL38-216	ENST00000585475	SLIT1	O75093	1534 aa		32.35	■■■□□ 2.77
MRPL38-216	ENST00000585475	LTK	P29376	864 aa		32.34	■■■□□ 2.77
MRPL38-216	ENST00000585475	SCAF11	Q99590	1463 aa	Known RBP	32.34	■■■□□ 2.77
MRPL38-216	ENST00000585475	CPS1	P31327	1500 aa		32.33	■■■□□ 2.77
MRPL38-216	ENST00000585475	ITGAE	P38570	1179 aa		32.33	■■■□□ 2.77
MRPL38-216	ENST00000585475	IQGAP1	P46940	1657 aa		32.33	■■■□□ 2.77
MRPL38-216	ENST00000585475	PIK3C2B	O00750	1634 aa		32.32	■■■□□ 2.76
MRPL38-216	ENST00000585475	SYNM	O15061	1565 aa		32.32	■■■□□ 2.76
MRPL38-216	ENST00000585475	TXNDC2	Q86VQ3	553 aa		32.31	■■■□□ 2.76
MRPL38-216	ENST00000585475	RPRD2	Q5VT52	1461 aa	Known RBP	32.3	■■■□□ 2.76
MRPL38-216	ENST00000585475	UBAP1L	F5GYI3	381 aa		32.29	■■■□□ 2.76
MRPL38-216	ENST00000585475	STAG3	Q9UJ98	1225 aa		32.29	■■■□□ 2.76
MRPL38-216	ENST00000585475	TMEM2	Q9UHN6	1383 aa		32.29	■■■□□ 2.76
MRPL38-216	ENST00000585475	UNC13B	O14795	1591 aa		32.28	■■■□□ 2.76
MRPL38-216	ENST00000585475	SLC52A1	Q9NWF4	448 aa		32.27	■■■□□ 2.76
MRPL38-216	ENST00000585475	EID1	Q9Y6B2	187 aa		32.27	■■■□□ 2.76
MRPL38-216	ENST00000585475	TET3	O43151	1660 aa		32.24	■■■□□ 2.75
MRPL38-216	ENST00000585475	RRBP1	Q9P2E9	1410 aa	Known RBP	32.24	■■■□□ 2.75
MRPL38-216	ENST00000585475	KDM5A	P29375	1690 aa	Known RBP	32.24	■■■□□ 2.75
MRPL38-216	ENST00000585475	ADGRB3	O60242	1522 aa		32.18	■■■□□ 2.74
MRPL38-216	ENST00000585475	NUP155	O75694	1391 aa		32.17	■■■□□ 2.74
MRPL38-216	ENST00000585475	IQGAP3	Q86VI3	1631 aa		32.15	■■■□□ 2.74
MRPL38-216	ENST00000585475	GCC2	Q8IWJ2	1684 aa		32.15	■■■□□ 2.74
MRPL38-216	ENST00000585475	TOM1	O60784	492 aa		32.13	■■■□□ 2.73
MRPL38-216	ENST00000585475	STRCP1	A6NGW2	1772 aa		32.12	■■■□□ 2.73
MRPL38-216	ENST00000585475	LRRC7	Q96NW7	1537 aa		32.12	■■■□□ 2.73
MRPL38-216	ENST00000585475		E9PCH4	1651 aa		32.09	■■■□□ 2.73
MRPL38-216	ENST00000585475	PIP4K2B	P78356	416 aa		32.05	■■■□□ 2.72
MRPL38-216	ENST00000585475	ZFYVE9	O95405	1425 aa		32.05	■■■□□ 2.72
MRPL38-216	ENST00000585475	NAIP	Q13075	1403 aa		32.03	■■■□□ 2.72
MRPL38-216	ENST00000585475	SLC26A8	Q96RN1	970 aa		32.03	■■■□□ 2.72
MRPL38-216	ENST00000585475	TMEM131L	A2VDJ0	1609 aa		32.03	■■■□□ 2.72
MRPL38-216	ENST00000585475	SCAF1	Q9H7N4	1312 aa	Known RBP	32.01	■■■□□ 2.72
MRPL38-216	ENST00000585475	RIMS2	Q9UQ26	1411 aa		32.01	■■■□□ 2.72
MRPL38-216	ENST00000585475	ALK	Q9UM73	1620 aa		32	■■■□□ 2.71
MRPL38-216	ENST00000585475	CHGA	P10645	457 aa	Known RBP	31.99	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms