RNA–Protein interactions for RNA: ENST00000585475.5

MRPL38-216, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 5

Gene MRPL38, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-216ENST00000585475 NISCHQ9Y2I1 1504 aa52.32■■■■■ 5.97
MRPL38-216ENST00000585475 CCDC180Q9P1Z9 1646 aa46.68■■■■■ 5.06
MRPL38-216ENST00000585475 ABCC9O60706 1549 aa46.34■■■■■ 5.01
MRPL38-216ENST00000585475 RB1CC1Q8TDY2 1594 aa44.27■■■■■ 4.68
MRPL38-216ENST00000585475 NACADO15069 1562 aa44.09■■■■■ 4.65
MRPL38-216ENST00000585475 DCAF8L2P0C7V8 631 aa43.97■■■■■ 4.63
MRPL38-216ENST00000585475 MYO15BQ96JP2 1530 aa43.68■■■■■ 4.58
MRPL38-216ENST00000585475 ZCCHC6Q5VYS8 1495 aaKnown RBP43.46■■■■■ 4.55
MRPL38-216ENST00000585475 DCAF1Q9Y4B6 1507 aa43.27■■■■■ 4.52
MRPL38-216ENST00000585475 PABPN1Q86U42 306 aaKnown RBP eCLIP43.25■■■■■ 4.51
MRPL38-216ENST00000585475 UNC13AQ9UPW8 1703 aa43.17■■■■■ 4.5
MRPL38-216ENST00000585475 DNAJC5BQ9UF47 199 aa43.17■■■■■ 4.5
MRPL38-216ENST00000585475 BICRAQ9NZM4 1560 aa42.99■■■■■ 4.47
MRPL38-216ENST00000585475 SCRIBQ14160 1630 aa42.58■■■■■ 4.41
MRPL38-216ENST00000585475 SHROOM4Q9ULL8 1493 aa42.49■■■■■ 4.39
MRPL38-216ENST00000585475 EIF4G1Q04637 1599 aaKnown RBP41.89■■■■■ 4.3
MRPL38-216ENST00000585475 CC2D2AQ9P2K1 1620 aa41.86■■■■■ 4.29
MRPL38-216ENST00000585475 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
MRPL38-216ENST00000585475 NCAPD3P42695 1498 aa40.76■■■■■ 4.12
MRPL38-216ENST00000585475 SMARCA4P51532 1647 aa40.68■■■■■ 4.1
MRPL38-216ENST00000585475 ATAD2BQ9ULI0 1458 aa40.68■■■■■ 4.1
MRPL38-216ENST00000585475 BAZ1AQ9NRL2 1556 aaPredicted RBP40.57■■■■■ 4.08
MRPL38-216ENST00000585475 SMARCA2P51531 1590 aa40.55■■■■■ 4.08
MRPL38-216ENST00000585475 HMGXB3Q12766 1538 aa40.44■■■■■ 4.06
MRPL38-216ENST00000585475 MROH2BQ7Z745 1585 aa40.32■■■■■ 4.05
MRPL38-216ENST00000585475 PEG3Q9GZU2 1588 aa40.32■■■■■ 4.05
MRPL38-216ENST00000585475 BAZ1BQ9UIG0 1483 aaKnown RBP40.27■■■■■ 4.04
MRPL38-216ENST00000585475 ERCC6Q03468 1493 aa39.97■■■■□ 3.99
MRPL38-216ENST00000585475 NESP48681 1621 aa39.94■■■■□ 3.98
MRPL38-216ENST00000585475 WIZO95785 1651 aa39.8■■■■□ 3.96
MRPL38-216ENST00000585475 CUX2O14529 1486 aa39.79■■■■□ 3.96
MRPL38-216ENST00000585475 LAMC3Q9Y6N6 1575 aa39.71■■■■□ 3.95
MRPL38-216ENST00000585475 RSF1Q96T23 1441 aaPredicted RBP39.67■■■■□ 3.94
MRPL38-216ENST00000585475 CADPSQ9ULU8 1353 aa39.54■■■■□ 3.92
MRPL38-216ENST00000585475 PDS5BQ9NTI5 1447 aa39.51■■■■□ 3.92
MRPL38-216ENST00000585475 THOC2Q8NI27 1593 aaKnown RBP39.42■■■■□ 3.9
MRPL38-216ENST00000585475 TOP2AP11388 1531 aaKnown RBP39.36■■■■□ 3.89
MRPL38-216ENST00000585475 KIF21AQ7Z4S6 1674 aa39.34■■■■□ 3.89
MRPL38-216ENST00000585475 DNAJC5Q9H3Z4 198 aa39.33■■■■□ 3.89
MRPL38-216ENST00000585475 CFTRP13569 1480 aa39.17■■■■□ 3.86
MRPL38-216ENST00000585475 MRC2Q9UBG0 1479 aa39.12■■■■□ 3.85
MRPL38-216ENST00000585475 FANCD2Q9BXW9 1451 aa39.05■■■■□ 3.84
MRPL38-216ENST00000585475 CEP164Q9UPV0 1460 aa39.05■■■■□ 3.84
MRPL38-216ENST00000585475 WDR62O43379 1518 aa39■■■■□ 3.83
MRPL38-216ENST00000585475 CCDC88BA6NC98 1476 aa38.94■■■■□ 3.82
MRPL38-216ENST00000585475 URB2Q14146 1524 aaKnown RBP38.71■■■■□ 3.79
MRPL38-216ENST00000585475 PRDM2Q13029 1718 aa38.63■■■■□ 3.78
MRPL38-216ENST00000585475 TOPBP1Q92547 1522 aa38.36■■■■□ 3.73
MRPL38-216ENST00000585475 ABCC8Q09428 1581 aa38.31■■■■□ 3.72
MRPL38-216ENST00000585475 IFT140Q96RY7 1462 aa38.27■■■■□ 3.72
MRPL38-216ENST00000585475 DNMBPQ6XZF7 1577 aa38.23■■■■□ 3.71
MRPL38-216ENST00000585475 SUPT5HO00267 1087 aaKnown RBP38.2■■■■□ 3.71
MRPL38-216ENST00000585475 ZNF608Q9ULD9 1512 aaPredicted RBP38.17■■■■□ 3.7
MRPL38-216ENST00000585475 OSCARQ8IYS5 282 aa38.07■■■■□ 3.68
MRPL38-216ENST00000585475 POLA1P09884 1462 aaPredicted RBP38■■■■□ 3.67
MRPL38-216ENST00000585475 TARBP1Q13395 1621 aaKnown RBP37.96■■■■□ 3.67
MRPL38-216ENST00000585475 EIF4G3O43432 1585 aaKnown RBP37.92■■■■□ 3.66
MRPL38-216ENST00000585475 AQRO60306 1485 aaKnown RBP eCLIP37.88■■■■□ 3.651e-6■■□□□ 12.5
MRPL38-216ENST00000585475 CUX1P39880 1505 aa37.86■■■■□ 3.65
MRPL38-216ENST00000585475 RAD54L2Q9Y4B4 1467 aa37.85■■■■□ 3.65
MRPL38-216ENST00000585475 SOGA1O94964 1423 aa37.85■■■■□ 3.65
MRPL38-216ENST00000585475 FGD5Q6ZNL6 1462 aa37.81■■■■□ 3.64
MRPL38-216ENST00000585475 TDRD9Q8NDG6 1382 aaKnown RBP37.72■■■■□ 3.63
MRPL38-216ENST00000585475 TRIM41Q8WV44 630 aa37.72■■■■□ 3.63
MRPL38-216ENST00000585475 WDR97A6NE52 1622 aa37.61■■■■□ 3.61
MRPL38-216ENST00000585475 FBLN2P98095 1184 aa37.53■■■■□ 3.6
MRPL38-216ENST00000585475 CHD1O14646 1710 aa37.5■■■■□ 3.59
MRPL38-216ENST00000585475 SNAPC4Q5SXM2 1469 aa37.49■■■■□ 3.59
MRPL38-216ENST00000585475 GRIN2BQ13224 1484 aa37.46■■■■□ 3.59
MRPL38-216ENST00000585475 RIMBP3CA6NJZ7 1639 aa37.44■■■■□ 3.58
MRPL38-216ENST00000585475 RIMBP3BA6NNM3 1639 aa37.44■■■■□ 3.58
MRPL38-216ENST00000585475 RIMBP3Q9UFD9 1639 aa37.44■■■■□ 3.58
MRPL38-216ENST00000585475 ABCA10Q8WWZ4 1543 aa37.43■■■■□ 3.58
MRPL38-216ENST00000585475 MAGI1Q96QZ7 1491 aaPredicted RBP37.42■■■■□ 3.58
MRPL38-216ENST00000585475 ARHGEF11O15085 1522 aa37.41■■■■□ 3.58
MRPL38-216ENST00000585475 WRNQ14191 1432 aaPredicted RBP eCLIP37.4■■■■□ 3.58
MRPL38-216ENST00000585475 GAPVD1Q14C86 1478 aa37.39■■■■□ 3.58
MRPL38-216ENST00000585475 CHMP7Q8WUX9 453 aaPredicted RBP37.35■■■■□ 3.57
MRPL38-216ENST00000585475 TOP2BQ02880 1626 aa37.33■■■■□ 3.57
MRPL38-216ENST00000585475 BIVM-ERCC5R4GMW8 1640 aa37.31■■■■□ 3.56
MRPL38-216ENST00000585475 SYNJ1O43426 1573 aa37.3■■■■□ 3.56
MRPL38-216ENST00000585475 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
MRPL38-216ENST00000585475 SYNJ2O15056 1496 aa37.28■■■■□ 3.56
MRPL38-216ENST00000585475 PBRM1Q86U86 1689 aa37.23■■■■□ 3.55
MRPL38-216ENST00000585475 CLASP1Q7Z460 1538 aa37.18■■■■□ 3.54
MRPL38-216ENST00000585475 CYB5RLQ6IPT4 315 aa37.13■■■■□ 3.53
MRPL38-216ENST00000585475 ARAP1Q96P48 1450 aa37.09■■■■□ 3.53
MRPL38-216ENST00000585475 ADAMTS12P58397 1594 aa36.98■■■■□ 3.51
MRPL38-216ENST00000585475 GRIN2AQ12879 1464 aa36.97■■■■□ 3.51
MRPL38-216ENST00000585475 ERICH3Q5RHP9 1530 aa36.95■■■■□ 3.51
MRPL38-216ENST00000585475 FHAD1B1AJZ9 1412 aa36.94■■■■□ 3.5
MRPL38-216ENST00000585475 NUP160Q12769 1436 aa36.86■■■■□ 3.49
MRPL38-216ENST00000585475 CEP170Q5SW79 1584 aa36.8■■■■□ 3.48
MRPL38-216ENST00000585475 KIF27Q86VH2 1401 aa36.66■■■■□ 3.46
MRPL38-216ENST00000585475 IGF1RP08069 1367 aa36.64■■■■□ 3.46
MRPL38-216ENST00000585475 ERCC6L2Q5T890 1561 aa36.62■■■■□ 3.45
MRPL38-216ENST00000585475 SHROOM2Q13796 1616 aa36.59■■■■□ 3.45
MRPL38-216ENST00000585475 TRHP20396 242 aaPredicted RBP36.56■■■■□ 3.44
MRPL38-216ENST00000585475 JPH4Q96JJ6 628 aa36.51■■■■□ 3.44
MRPL38-216ENST00000585475 PRG4Q92954 1404 aaPredicted RBP36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms