RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 FAM135AQ9P2D6 1515 aa36.47■■■■□ 3.43
LSM7-203ENST00000585409 CAMSAP2Q08AD1 1489 aa36.45■■■■□ 3.43
LSM7-203ENST00000585409 NCOA2Q15596 1464 aa36.45■■■■□ 3.43
LSM7-203ENST00000585409 KDM5DQ9BY66 1539 aa36.44■■■■□ 3.42
LSM7-203ENST00000585409 POLR1AO95602 1720 aaPredicted RBP36.42■■■■□ 3.42
LSM7-203ENST00000585409 SOCS7O14512 581 aa36.42■■■■□ 3.42
LSM7-203ENST00000585409 PZPP20742 1482 aa36.41■■■■□ 3.42
LSM7-203ENST00000585409 KIF3BO15066 747 aa36.39■■■■□ 3.42
LSM7-203ENST00000585409 RSPH4AQ5TD94 716 aa36.39■■■■□ 3.42
LSM7-203ENST00000585409 TNRQ92752 1358 aa36.38■■■■□ 3.41
LSM7-203ENST00000585409 NEURL4Q96JN8 1562 aa36.37■■■■□ 3.41
LSM7-203ENST00000585409 UBAP1LF5GYI3 381 aa36.37■■■■□ 3.41
LSM7-203ENST00000585409 ARHGEF5Q12774 1597 aa36.36■■■■□ 3.41
LSM7-203ENST00000585409 FBXO31Q5XUX0 539 aaPredicted RBP36.36■■■■□ 3.41
LSM7-203ENST00000585409 WASHC2CQ9Y4E1 1318 aa36.29■■■■□ 3.4
LSM7-203ENST00000585409 CPS1P31327 1500 aa36.26■■■■□ 3.4
LSM7-203ENST00000585409 APLP2Q06481 763 aa36.25■■■■□ 3.39
LSM7-203ENST00000585409 MIA2Q96PC5 1412 aa36.25■■■■□ 3.39
LSM7-203ENST00000585409 NLRP1Q9C000 1473 aa36.24■■■■□ 3.39
LSM7-203ENST00000585409 RNF17Q9BXT8 1623 aaKnown RBP36.23■■■■□ 3.39
LSM7-203ENST00000585409 SHANK2Q9UPX8 1470 aa36.22■■■■□ 3.39
LSM7-203ENST00000585409 MAST1Q9Y2H9 1570 aa36.21■■■■□ 3.39
LSM7-203ENST00000585409 DEPDC5O75140 1603 aa36.2■■■■□ 3.39
LSM7-203ENST00000585409 UGGT1Q9NYU2 1555 aa36.2■■■■□ 3.39
LSM7-203ENST00000585409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.2■■■■□ 3.39
LSM7-203ENST00000585409 TSPY4P0CV99 314 aa36.2■■■■□ 3.39
LSM7-203ENST00000585409 TSPY10P0CW01 314 aa36.2■■■■□ 3.39
LSM7-203ENST00000585409 LRRC9Q6ZRR7 1453 aa36.19■■■■□ 3.38
LSM7-203ENST00000585409 MAP3K1Q13233 1512 aa36.18■■■■□ 3.38
LSM7-203ENST00000585409 ZC3H13Q5T200 1668 aaKnown RBP36.18■■■■□ 3.38
LSM7-203ENST00000585409 VWDEQ8N2E2 1590 aa36.18■■■■□ 3.38
LSM7-203ENST00000585409 ANKLE2Q86XL3 938 aa36.17■■■■□ 3.38
LSM7-203ENST00000585409 THEMISQ8N1K5 641 aaPredicted RBP36.17■■■■□ 3.38
LSM7-203ENST00000585409 MED14O60244 1454 aa36.17■■■■□ 3.38
LSM7-203ENST00000585409 EIF2AK4Q9P2K8 1649 aaKnown RBP36.15■■■■□ 3.38
LSM7-203ENST00000585409 ABCC3O15438 1527 aa36.14■■■■□ 3.38
LSM7-203ENST00000585409 NPHP4O75161 1426 aaPredicted RBP36.11■■■■□ 3.37
LSM7-203ENST00000585409 MROH1Q8NDA8 1641 aa36.09■■■■□ 3.37
LSM7-203ENST00000585409 IQGAP1P46940 1657 aa36.09■■■■□ 3.37
LSM7-203ENST00000585409 TOM1O60784 492 aa36.08■■■■□ 3.37
LSM7-203ENST00000585409 HSPA1LP34931 641 aa36.04■■■■□ 3.36
LSM7-203ENST00000585409 ERVK-7P63135 1459 aa36.04■■■■□ 3.36
LSM7-203ENST00000585409 CEP152O94986 1710 aa36.03■■■■□ 3.36
LSM7-203ENST00000585409 ALKQ9UM73 1620 aa36.02■■■■□ 3.36
LSM7-203ENST00000585409 PIP4K2BP78356 416 aa36.02■■■■□ 3.36
LSM7-203ENST00000585409 MYOM3Q5VTT5 1437 aa36.01■■■■□ 3.36
LSM7-203ENST00000585409 SCAF1Q9H7N4 1312 aaKnown RBP36.01■■■■□ 3.35
LSM7-203ENST00000585409 STRCP1A6NGW2 1772 aa36■■■■□ 3.35
LSM7-203ENST00000585409 MED1Q15648 1581 aaPredicted RBP35.99■■■■□ 3.35
LSM7-203ENST00000585409 KANK4Q5T7N3 995 aaPredicted RBP35.99■■■■□ 3.35
LSM7-203ENST00000585409 UBR1Q8IWV7 1749 aa35.97■■■■□ 3.35
LSM7-203ENST00000585409 CFAP65Q6ZU64 1925 aaKnown RBP35.97■■■■□ 3.35
LSM7-203ENST00000585409 DUOX2Q9NRD8 1548 aa35.96■■■■□ 3.35
LSM7-203ENST00000585409 SYNMO15061 1565 aa35.92■■■■□ 3.34
LSM7-203ENST00000585409 LRRC7Q96NW7 1537 aa35.9■■■■□ 3.34
LSM7-203ENST00000585409 CROCC2H7BZ55 1655 aa35.9■■■■□ 3.34
LSM7-203ENST00000585409 PRDM15P57071 1507 aaPredicted RBP35.89■■■■□ 3.34
LSM7-203ENST00000585409 ARHGAP31Q2M1Z3 1444 aa35.86■■■■□ 3.33
LSM7-203ENST00000585409 SCAF11Q99590 1463 aaKnown RBP35.84■■■■□ 3.33
LSM7-203ENST00000585409 ARHGAP23Q9P227 1491 aa35.84■■■■□ 3.33
LSM7-203ENST00000585409 ERBINQ96RT1 1412 aa35.83■■■■□ 3.33
LSM7-203ENST00000585409 SLIT1O75093 1534 aa35.83■■■■□ 3.33
LSM7-203ENST00000585409 KIF15Q9NS87 1388 aa35.83■■■■□ 3.33
LSM7-203ENST00000585409 ABCC5O15440 1437 aa35.81■■■■□ 3.32
LSM7-203ENST00000585409 PTPN23Q9H3S7 1636 aa35.79■■■■□ 3.32
LSM7-203ENST00000585409 LTKP29376 864 aa35.75■■■■□ 3.31
LSM7-203ENST00000585409 XIRP1Q702N8 1843 aaKnown RBP35.73■■■■□ 3.31
LSM7-203ENST00000585409 PIK3C2BO00750 1634 aa35.73■■■■□ 3.31
LSM7-203ENST00000585409 RRP7BPQ9NSQ0 103 aa35.72■■■■□ 3.31
LSM7-203ENST00000585409 DAPK1P53355 1430 aa35.71■■■■□ 3.31
LSM7-203ENST00000585409 TXNDC2Q86VQ3 553 aa35.7■■■■□ 3.31
LSM7-203ENST00000585409 KDM5AP29375 1690 aaKnown RBP35.69■■■■□ 3.3
LSM7-203ENST00000585409 LMTK2Q8IWU2 1503 aa35.66■■■■□ 3.3
LSM7-203ENST00000585409 FGD6Q6ZV73 1430 aa35.64■■■■□ 3.3
LSM7-203ENST00000585409 TMEM2Q9UHN6 1383 aa35.64■■■■□ 3.3
LSM7-203ENST00000585409 EID1Q9Y6B2 187 aa35.63■■■■□ 3.29
LSM7-203ENST00000585409 KANK1Q14678 1352 aa35.63■■■■□ 3.29
LSM7-203ENST00000585409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.62■■■■□ 3.298e-8■■□□□ 14
LSM7-203ENST00000585409 PHF23Q9BUL5 403 aaPredicted RBP35.6■■■■□ 3.29
LSM7-203ENST00000585409 EFCAB6Q5THR3 1501 aa35.6■■■■□ 3.29
LSM7-203ENST00000585409 ANKRD30AQ9BXX3 1397 aa35.57■■■■□ 3.28
LSM7-203ENST00000585409 SENP3Q9H4L4 574 aaPredicted RBP35.56■■■■□ 3.28
LSM7-203ENST00000585409 TET3O43151 1660 aa35.53■■■■□ 3.28
LSM7-203ENST00000585409 IDI1Q13907 227 aa35.53■■■■□ 3.28
LSM7-203ENST00000585409 NOS1P29475 1434 aa35.52■■■■□ 3.28
LSM7-203ENST00000585409 STAG3Q9UJ98 1225 aa35.52■■■■□ 3.28
LSM7-203ENST00000585409 CHIC2Q9UKJ5 165 aa35.5■■■■□ 3.27
LSM7-203ENST00000585409 FAM135BQ49AJ0 1406 aa35.48■■■■□ 3.27
LSM7-203ENST00000585409 ADGRL2O95490 1459 aa35.48■■■■□ 3.27
LSM7-203ENST00000585409 ADGRB3O60242 1522 aa35.47■■■■□ 3.27
LSM7-203ENST00000585409 KCNA6P17658 529 aa35.45■■■■□ 3.27
LSM7-203ENST00000585409 TMEM94Q12767 1356 aa35.45■■■■□ 3.27
LSM7-203ENST00000585409 NWD1Q149M9 1564 aa35.42■■■■□ 3.26
LSM7-203ENST00000585409 PPARGC1BQ86YN6 1023 aaKnown RBP35.41■■■■□ 3.26
LSM7-203ENST00000585409 SLC26A8Q96RN1 970 aa35.39■■■■□ 3.26
LSM7-203ENST00000585409 RGS17Q9UGC6 210 aaPredicted RBP35.39■■■■□ 3.26
LSM7-203ENST00000585409 NKTRP30414 1462 aaKnown RBP35.38■■■■□ 3.25
LSM7-203ENST00000585409 RPRD2Q5VT52 1461 aaKnown RBP35.38■■■■□ 3.25
LSM7-203ENST00000585409 SLC52A1Q9NWF4 448 aa35.38■■■■□ 3.25
LSM7-203ENST00000585409 ROBO1Q9Y6N7 1651 aa35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms