RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 TSPY10P0CW01 314 aa21.08■□□□□ 0.97
PRKCSH-201ENST00000585325 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
PRKCSH-201ENST00000585325 MYOM3Q5VTT5 1437 aa21.06■□□□□ 0.96
PRKCSH-201ENST00000585325 KIF3BO15066 747 aa21.06■□□□□ 0.96
PRKCSH-201ENST00000585325 APLP2Q06481 763 aa21.06■□□□□ 0.96
PRKCSH-201ENST00000585325 PTPRKQ15262 1439 aa21.05■□□□□ 0.96
PRKCSH-201ENST00000585325 MYO3AQ8NEV4 1616 aa21.05■□□□□ 0.96
PRKCSH-201ENST00000585325 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
PRKCSH-201ENST00000585325 PLA2R1Q13018 1463 aa21.03■□□□□ 0.96
PRKCSH-201ENST00000585325 PKD2Q13563 968 aa21.02■□□□□ 0.96
PRKCSH-201ENST00000585325 ZNF142P52746 1687 aaPredicted RBP21.02■□□□□ 0.95
PRKCSH-201ENST00000585325 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.95
PRKCSH-201ENST00000585325 KDM5DQ9BY66 1539 aa21.01■□□□□ 0.95
PRKCSH-201ENST00000585325 TCOF1Q13428 1488 aaKnown RBP21.01■□□□□ 0.95
PRKCSH-201ENST00000585325 CEP170BQ9Y4F5 1589 aaPredicted RBP21■□□□□ 0.95
PRKCSH-201ENST00000585325 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
PRKCSH-201ENST00000585325 WASHC2CQ9Y4E1 1318 aa20.98■□□□□ 0.95
PRKCSH-201ENST00000585325 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
PRKCSH-201ENST00000585325 PTPN23Q9H3S7 1636 aa20.95■□□□□ 0.94
PRKCSH-201ENST00000585325 HSPA1LP34931 641 aa20.94■□□□□ 0.94
PRKCSH-201ENST00000585325 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
PRKCSH-201ENST00000585325 PZPP20742 1482 aa20.94■□□□□ 0.94
PRKCSH-201ENST00000585325 RNF17Q9BXT8 1623 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-201ENST00000585325 EIF2AK4Q9P2K8 1649 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-201ENST00000585325 FBXO31Q5XUX0 539 aaPredicted RBP20.92■□□□□ 0.94
PRKCSH-201ENST00000585325 TNRQ92752 1358 aa20.92■□□□□ 0.94
PRKCSH-201ENST00000585325 A2ML1A8K2U0 1454 aa20.92■□□□□ 0.94
PRKCSH-201ENST00000585325 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
PRKCSH-201ENST00000585325 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
PRKCSH-201ENST00000585325 DNMT1P26358 1616 aaKnown RBP20.9■□□□□ 0.94
PRKCSH-201ENST00000585325 ZC3H13Q5T200 1668 aaKnown RBP20.89■□□□□ 0.93
PRKCSH-201ENST00000585325 DUOX2Q9NRD8 1548 aa20.88■□□□□ 0.93
PRKCSH-201ENST00000585325 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
PRKCSH-201ENST00000585325 ABCC5O15440 1437 aa20.88■□□□□ 0.93
PRKCSH-201ENST00000585325 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
PRKCSH-201ENST00000585325 TOM1O60784 492 aa20.87■□□□□ 0.93
PRKCSH-201ENST00000585325 ABCC3O15438 1527 aa20.87■□□□□ 0.93
PRKCSH-201ENST00000585325 DAPK1P53355 1430 aa20.86■□□□□ 0.93
PRKCSH-201ENST00000585325 MROH1Q8NDA8 1641 aa20.86■□□□□ 0.93
PRKCSH-201ENST00000585325 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
PRKCSH-201ENST00000585325 CPS1P31327 1500 aa20.85■□□□□ 0.93
PRKCSH-201ENST00000585325 RRP7BPQ9NSQ0 103 aa20.84■□□□□ 0.93
PRKCSH-201ENST00000585325 CEP152O94986 1710 aa20.84■□□□□ 0.93
PRKCSH-201ENST00000585325 NLRP1Q9C000 1473 aa20.82■□□□□ 0.92
PRKCSH-201ENST00000585325 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
PRKCSH-201ENST00000585325 ERBINQ96RT1 1412 aa20.82■□□□□ 0.92
PRKCSH-201ENST00000585325 POLR1AO95602 1720 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-201ENST00000585325 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-201ENST00000585325 UGGT1Q9NYU2 1555 aa20.8■□□□□ 0.92
PRKCSH-201ENST00000585325 CHIC2Q9UKJ5 165 aa20.79■□□□□ 0.92
PRKCSH-201ENST00000585325 PRDM15P57071 1507 aaPredicted RBP20.78■□□□□ 0.92
PRKCSH-201ENST00000585325 ERVK-7P63135 1459 aa20.77■□□□□ 0.92
PRKCSH-201ENST00000585325 ANKRD30AQ9BXX3 1397 aa20.77■□□□□ 0.92
PRKCSH-201ENST00000585325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.77■□□□□ 0.92
PRKCSH-201ENST00000585325 THEMISQ8N1K5 641 aaPredicted RBP20.77■□□□□ 0.92
PRKCSH-201ENST00000585325 CFAP65Q6ZU64 1925 aaKnown RBP20.75■□□□□ 0.91
PRKCSH-201ENST00000585325 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
PRKCSH-201ENST00000585325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.914e-7■■□□□ 12.8
PRKCSH-201ENST00000585325 ALKQ9UM73 1620 aa20.75■□□□□ 0.91
PRKCSH-201ENST00000585325 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
PRKCSH-201ENST00000585325 VWDEQ8N2E2 1590 aa20.74■□□□□ 0.91
PRKCSH-201ENST00000585325 DEPDC5O75140 1603 aa20.74■□□□□ 0.91
PRKCSH-201ENST00000585325 KANK1Q14678 1352 aa20.72■□□□□ 0.91
PRKCSH-201ENST00000585325 ARHGAP31Q2M1Z3 1444 aa20.7■□□□□ 0.9
PRKCSH-201ENST00000585325 ADGRL2O95490 1459 aa20.69■□□□□ 0.9
PRKCSH-201ENST00000585325 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
PRKCSH-201ENST00000585325 NPHP4O75161 1426 aaPredicted RBP20.69■□□□□ 0.9
PRKCSH-201ENST00000585325 UBR1Q8IWV7 1749 aa20.67■□□□□ 0.9
PRKCSH-201ENST00000585325 MED14O60244 1454 aa20.67■□□□□ 0.9
PRKCSH-201ENST00000585325 IQGAP1P46940 1657 aa20.66■□□□□ 0.9
PRKCSH-201ENST00000585325 LMTK2Q8IWU2 1503 aa20.64■□□□□ 0.9
PRKCSH-201ENST00000585325 LRRC7Q96NW7 1537 aa20.62■□□□□ 0.89
PRKCSH-201ENST00000585325 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
PRKCSH-201ENST00000585325 PIK3C2BO00750 1634 aa20.6■□□□□ 0.89
PRKCSH-201ENST00000585325 STRCP1A6NGW2 1772 aa20.59■□□□□ 0.89
PRKCSH-201ENST00000585325 EFCAB6Q5THR3 1501 aa20.59■□□□□ 0.89
PRKCSH-201ENST00000585325 SYNMO15061 1565 aa20.59■□□□□ 0.89
PRKCSH-201ENST00000585325 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.89
PRKCSH-201ENST00000585325 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
PRKCSH-201ENST00000585325 RGS17Q9UGC6 210 aaPredicted RBP20.58■□□□□ 0.89
PRKCSH-201ENST00000585325 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.89
PRKCSH-201ENST00000585325 SLIT1O75093 1534 aa20.58■□□□□ 0.88
PRKCSH-201ENST00000585325 ARHGAP23Q9P227 1491 aa20.57■□□□□ 0.88
PRKCSH-201ENST00000585325 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
PRKCSH-201ENST00000585325 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
PRKCSH-201ENST00000585325 LTKP29376 864 aa20.54■□□□□ 0.88
PRKCSH-201ENST00000585325 IDI1Q13907 227 aa20.53■□□□□ 0.88
PRKCSH-201ENST00000585325 KDM5AP29375 1690 aaKnown RBP20.53■□□□□ 0.88
PRKCSH-201ENST00000585325 NOS1P29475 1434 aa20.53■□□□□ 0.88
PRKCSH-201ENST00000585325 TMEM2Q9UHN6 1383 aa20.52■□□□□ 0.88
PRKCSH-201ENST00000585325 ITGAEP38570 1179 aa20.52■□□□□ 0.88
PRKCSH-201ENST00000585325 TET3O43151 1660 aa20.51■□□□□ 0.87
PRKCSH-201ENST00000585325 UNC13BO14795 1591 aa20.51■□□□□ 0.87
PRKCSH-201ENST00000585325 ROCK1Q13464 1354 aa20.51■□□□□ 0.87
PRKCSH-201ENST00000585325 RPRD2Q5VT52 1461 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-201ENST00000585325 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
PRKCSH-201ENST00000585325 GCC2Q8IWJ2 1684 aa20.49■□□□□ 0.87
PRKCSH-201ENST00000585325 SLC52A1Q9NWF4 448 aa20.47■□□□□ 0.87
PRKCSH-201ENST00000585325 POTEAQ6S8J7 498 aa20.44■□□□□ 0.86
PRKCSH-201ENST00000585325 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms