RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 TNRQ92752 1358 aa20.81■□□□□ 0.92
CDK5RAP3-234ENST00000584525 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
CDK5RAP3-234ENST00000584525 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
CDK5RAP3-234ENST00000584525 CCDC141Q6ZP82 1450 aa20.78■□□□□ 0.92
CDK5RAP3-234ENST00000584525 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
CDK5RAP3-234ENST00000584525 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
CDK5RAP3-234ENST00000584525 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
CDK5RAP3-234ENST00000584525 NCOA2Q15596 1464 aa20.76■□□□□ 0.91
CDK5RAP3-234ENST00000584525 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
CDK5RAP3-234ENST00000584525 ANKLE2Q86XL3 938 aa20.76■□□□□ 0.91
CDK5RAP3-234ENST00000584525 PIP4K2BP78356 416 aa20.75■□□□□ 0.91
CDK5RAP3-234ENST00000584525 THEMISQ8N1K5 641 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP3-234ENST00000584525 CAMSAP2Q08AD1 1489 aa20.75■□□□□ 0.91
CDK5RAP3-234ENST00000584525 DNMT1P26358 1616 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP3-234ENST00000584525 PZPP20742 1482 aa20.74■□□□□ 0.91
CDK5RAP3-234ENST00000584525 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
CDK5RAP3-234ENST00000584525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDK5RAP3-234ENST00000584525 TOM1O60784 492 aa20.72■□□□□ 0.91
CDK5RAP3-234ENST00000584525 MIA2Q96PC5 1412 aa20.71■□□□□ 0.91
CDK5RAP3-234ENST00000584525 HSPA1LP34931 641 aa20.7■□□□□ 0.9
CDK5RAP3-234ENST00000584525 SHANK2Q9UPX8 1470 aa20.69■□□□□ 0.9
CDK5RAP3-234ENST00000584525 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
CDK5RAP3-234ENST00000584525 NLRP1Q9C000 1473 aa20.66■□□□□ 0.9
CDK5RAP3-234ENST00000584525 CPS1P31327 1500 aa20.66■□□□□ 0.9
CDK5RAP3-234ENST00000584525 NEURL4Q96JN8 1562 aa20.64■□□□□ 0.9
CDK5RAP3-234ENST00000584525 NPHP4O75161 1426 aaPredicted RBP20.64■□□□□ 0.89
CDK5RAP3-234ENST00000584525 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
CDK5RAP3-234ENST00000584525 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
CDK5RAP3-234ENST00000584525 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
CDK5RAP3-234ENST00000584525 MED14O60244 1454 aa20.59■□□□□ 0.89
CDK5RAP3-234ENST00000584525 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
CDK5RAP3-234ENST00000584525 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.88
CDK5RAP3-234ENST00000584525 VWDEQ8N2E2 1590 aa20.57■□□□□ 0.88
CDK5RAP3-234ENST00000584525 ABCC3O15438 1527 aa20.57■□□□□ 0.88
CDK5RAP3-234ENST00000584525 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
CDK5RAP3-234ENST00000584525 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-234ENST00000584525 ERVK-7P63135 1459 aa20.54■□□□□ 0.88
CDK5RAP3-234ENST00000584525 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
CDK5RAP3-234ENST00000584525 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
CDK5RAP3-234ENST00000584525 MYOM3Q5VTT5 1437 aa20.52■□□□□ 0.87
CDK5RAP3-234ENST00000584525 MAST1Q9Y2H9 1570 aa20.51■□□□□ 0.87
CDK5RAP3-234ENST00000584525 TXNDC2Q86VQ3 553 aa20.51■□□□□ 0.87
CDK5RAP3-234ENST00000584525 RNF17Q9BXT8 1623 aaKnown RBP20.51■□□□□ 0.87
CDK5RAP3-234ENST00000584525 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
CDK5RAP3-234ENST00000584525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.878e-9■■□□□ 13
CDK5RAP3-234ENST00000584525 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
CDK5RAP3-234ENST00000584525 LRRC7Q96NW7 1537 aa20.48■□□□□ 0.87
CDK5RAP3-234ENST00000584525 LTKP29376 864 aa20.48■□□□□ 0.87
CDK5RAP3-234ENST00000584525 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
CDK5RAP3-234ENST00000584525 KIF15Q9NS87 1388 aa20.47■□□□□ 0.87
CDK5RAP3-234ENST00000584525 APLP2Q06481 763 aa20.47■□□□□ 0.87
CDK5RAP3-234ENST00000584525 EID1Q9Y6B2 187 aa20.47■□□□□ 0.87
CDK5RAP3-234ENST00000584525 DUOX2Q9NRD8 1548 aa20.47■□□□□ 0.87
CDK5RAP3-234ENST00000584525 ZC3H13Q5T200 1668 aaKnown RBP20.46■□□□□ 0.87
CDK5RAP3-234ENST00000584525 MAP3K1Q13233 1512 aa20.46■□□□□ 0.87
CDK5RAP3-234ENST00000584525 EIF2AK4Q9P2K8 1649 aaKnown RBP20.45■□□□□ 0.87
CDK5RAP3-234ENST00000584525 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
CDK5RAP3-234ENST00000584525 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ALKQ9UM73 1620 aa20.45■□□□□ 0.86
CDK5RAP3-234ENST00000584525 MROH1Q8NDA8 1641 aa20.44■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ABCC5O15440 1437 aa20.43■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ARHGAP31Q2M1Z3 1444 aa20.42■□□□□ 0.86
CDK5RAP3-234ENST00000584525 KANK1Q14678 1352 aa20.4■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ARHGAP23Q9P227 1491 aa20.39■□□□□ 0.85
CDK5RAP3-234ENST00000584525 CHIC2Q9UKJ5 165 aa20.39■□□□□ 0.85
CDK5RAP3-234ENST00000584525 TMEM2Q9UHN6 1383 aa20.38■□□□□ 0.85
CDK5RAP3-234ENST00000584525 SLIT1O75093 1534 aa20.37■□□□□ 0.85
CDK5RAP3-234ENST00000584525 SYNMO15061 1565 aa20.37■□□□□ 0.85
CDK5RAP3-234ENST00000584525 CEP152O94986 1710 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 UBR1Q8IWV7 1749 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 IDI1Q13907 227 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 PRDM15P57071 1507 aaPredicted RBP20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 STRCP1A6NGW2 1772 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 DAPK1P53355 1430 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
CDK5RAP3-234ENST00000584525 SLC26A8Q96RN1 970 aa20.32■□□□□ 0.84
CDK5RAP3-234ENST00000584525 PTPN23Q9H3S7 1636 aa20.31■□□□□ 0.84
CDK5RAP3-234ENST00000584525 FGD6Q6ZV73 1430 aa20.31■□□□□ 0.84
CDK5RAP3-234ENST00000584525 KCNA6P17658 529 aa20.31■□□□□ 0.84
CDK5RAP3-234ENST00000584525 BCANQ96GW7 911 aa20.31■□□□□ 0.84
CDK5RAP3-234ENST00000584525 PROSER2Q86WR7 435 aaPredicted RBP20.3■□□□□ 0.84
CDK5RAP3-234ENST00000584525 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
CDK5RAP3-234ENST00000584525 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
CDK5RAP3-234ENST00000584525 CFAP65Q6ZU64 1925 aaKnown RBP20.28■□□□□ 0.84
CDK5RAP3-234ENST00000584525 FAM135BQ49AJ0 1406 aa20.27■□□□□ 0.84
CDK5RAP3-234ENST00000584525 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
CDK5RAP3-234ENST00000584525 PIK3C2BO00750 1634 aa20.27■□□□□ 0.84
CDK5RAP3-234ENST00000584525 RGS17Q9UGC6 210 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-234ENST00000584525 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
CDK5RAP3-234ENST00000584525 LMTK2Q8IWU2 1503 aa20.26■□□□□ 0.83
CDK5RAP3-234ENST00000584525 FAM50AQ14320 339 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-234ENST00000584525 CROCC2H7BZ55 1655 aa20.23■□□□□ 0.83
CDK5RAP3-234ENST00000584525 NOS1P29475 1434 aa20.23■□□□□ 0.83
CDK5RAP3-234ENST00000584525 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP3-234ENST00000584525 TET3O43151 1660 aa20.19■□□□□ 0.82
CDK5RAP3-234ENST00000584525 HDGFP51858 240 aaKnown RBP20.18■□□□□ 0.82
CDK5RAP3-234ENST00000584525 MSH6P52701 1360 aa20.18■□□□□ 0.82
CDK5RAP3-234ENST00000584525 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
CDK5RAP3-234ENST00000584525 ANKRD50Q9ULJ7 1429 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms