RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.05
CDK5RAP3-227ENST00000583352 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-227ENST00000583352 TNRQ92752 1358 aa15.38■□□□□ 0.05
CDK5RAP3-227ENST00000583352 ARHGEF5Q12774 1597 aa15.38■□□□□ 0.05
CDK5RAP3-227ENST00000583352 TSPY4P0CV99 314 aa15.38■□□□□ 0.05
CDK5RAP3-227ENST00000583352 TSPY10P0CW01 314 aa15.38■□□□□ 0.05
CDK5RAP3-227ENST00000583352 PZPP20742 1482 aa15.38■□□□□ 0.05
CDK5RAP3-227ENST00000583352 WASHC2CQ9Y4E1 1318 aa15.37■□□□□ 0.05
CDK5RAP3-227ENST00000583352 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
CDK5RAP3-227ENST00000583352 FBXO31Q5XUX0 539 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-227ENST00000583352 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
CDK5RAP3-227ENST00000583352 UBAP1LF5GYI3 381 aa15.35■□□□□ 0.05
CDK5RAP3-227ENST00000583352 LRRC9Q6ZRR7 1453 aa15.34■□□□□ 0.05
CDK5RAP3-227ENST00000583352 POLR1AO95602 1720 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-227ENST00000583352 ILDR2Q71H61 639 aa15.33■□□□□ 0.04
CDK5RAP3-227ENST00000583352 MIA2Q96PC5 1412 aa15.32■□□□□ 0.04
CDK5RAP3-227ENST00000583352 NLRP1Q9C000 1473 aa15.31■□□□□ 0.04
CDK5RAP3-227ENST00000583352 NEURL4Q96JN8 1562 aa15.31■□□□□ 0.04
CDK5RAP3-227ENST00000583352 MAST1Q9Y2H9 1570 aa15.31■□□□□ 0.04
CDK5RAP3-227ENST00000583352 ANKLE2Q86XL3 938 aa15.3■□□□□ 0.04
CDK5RAP3-227ENST00000583352 THEMISQ8N1K5 641 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-227ENST00000583352 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-227ENST00000583352 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
CDK5RAP3-227ENST00000583352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDK5RAP3-227ENST00000583352 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
CDK5RAP3-227ENST00000583352 UGGT1Q9NYU2 1555 aa15.28■□□□□ 0.04
CDK5RAP3-227ENST00000583352 CPS1P31327 1500 aa15.28■□□□□ 0.04
CDK5RAP3-227ENST00000583352 SOCS7O14512 581 aa15.28■□□□□ 0.04
CDK5RAP3-227ENST00000583352 ZC3H13Q5T200 1668 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-227ENST00000583352 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-227ENST00000583352 ABCC3O15438 1527 aa15.27■□□□□ 0.04
CDK5RAP3-227ENST00000583352 SHANK2Q9UPX8 1470 aa15.27■□□□□ 0.04
CDK5RAP3-227ENST00000583352 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
CDK5RAP3-227ENST00000583352 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-227ENST00000583352 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-227ENST00000583352 DEPDC5O75140 1603 aa15.25■□□□□ 0.03
CDK5RAP3-227ENST00000583352 TOM1O60784 492 aa15.24■□□□□ 0.03
CDK5RAP3-227ENST00000583352 MED14O60244 1454 aa15.24■□□□□ 0.03
CDK5RAP3-227ENST00000583352 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-227ENST00000583352 ERVK-7P63135 1459 aa15.23■□□□□ 0.03
CDK5RAP3-227ENST00000583352 VWDEQ8N2E2 1590 aa15.23■□□□□ 0.03
CDK5RAP3-227ENST00000583352 DUOX2Q9NRD8 1548 aa15.22■□□□□ 0.03
CDK5RAP3-227ENST00000583352 MROH1Q8NDA8 1641 aa15.22■□□□□ 0.03
CDK5RAP3-227ENST00000583352 CEP152O94986 1710 aa15.21■□□□□ 0.03
CDK5RAP3-227ENST00000583352 PIP4K2BP78356 416 aa15.21■□□□□ 0.03
CDK5RAP3-227ENST00000583352 IQGAP1P46940 1657 aa15.21■□□□□ 0.03
CDK5RAP3-227ENST00000583352 APLP2Q06481 763 aa15.2■□□□□ 0.02
CDK5RAP3-227ENST00000583352 KIF15Q9NS87 1388 aa15.19■□□□□ 0.02
CDK5RAP3-227ENST00000583352 HSPA1LP34931 641 aa15.18■□□□□ 0.02
CDK5RAP3-227ENST00000583352 ERBINQ96RT1 1412 aa15.17■□□□□ 0.02
CDK5RAP3-227ENST00000583352 CROCC2H7BZ55 1655 aa15.17■□□□□ 0.02
CDK5RAP3-227ENST00000583352 CFAP65Q6ZU64 1925 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-227ENST00000583352 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
CDK5RAP3-227ENST00000583352 PRDM15P57071 1507 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-227ENST00000583352 ABCC5O15440 1437 aa15.17■□□□□ 0.02
CDK5RAP3-227ENST00000583352 RRP7BPQ9NSQ0 103 aa15.16■□□□□ 0.02
CDK5RAP3-227ENST00000583352 UBR1Q8IWV7 1749 aa15.16■□□□□ 0.02
CDK5RAP3-227ENST00000583352 ARHGAP31Q2M1Z3 1444 aa15.16■□□□□ 0.02
CDK5RAP3-227ENST00000583352 DAPK1P53355 1430 aa15.14■□□□□ 0.01
CDK5RAP3-227ENST00000583352 SYNMO15061 1565 aa15.14■□□□□ 0.01
CDK5RAP3-227ENST00000583352 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-227ENST00000583352 KANK1Q14678 1352 aa15.13■□□□□ 0.01
CDK5RAP3-227ENST00000583352 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
CDK5RAP3-227ENST00000583352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.014e-9■■□□□ 14.2
CDK5RAP3-227ENST00000583352 STRCP1A6NGW2 1772 aa15.13■□□□□ 0.01
CDK5RAP3-227ENST00000583352 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-227ENST00000583352 FGD6Q6ZV73 1430 aa15.12■□□□□ 0.01
CDK5RAP3-227ENST00000583352 TXNDC2Q86VQ3 553 aa15.12■□□□□ 0.01
CDK5RAP3-227ENST00000583352 ARHGAP23Q9P227 1491 aa15.12■□□□□ 0.01
CDK5RAP3-227ENST00000583352 SLIT1O75093 1534 aa15.12■□□□□ 0.01
CDK5RAP3-227ENST00000583352 ALKQ9UM73 1620 aa15.11■□□□□ 0.01
CDK5RAP3-227ENST00000583352 EID1Q9Y6B2 187 aa15.11■□□□□ 0.01
CDK5RAP3-227ENST00000583352 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
CDK5RAP3-227ENST00000583352 LTKP29376 864 aa15.1■□□□□ 0.01
CDK5RAP3-227ENST00000583352 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
CDK5RAP3-227ENST00000583352 PIK3C2BO00750 1634 aa15.09■□□□□ 0.01
CDK5RAP3-227ENST00000583352 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
CDK5RAP3-227ENST00000583352 LMTK2Q8IWU2 1503 aa15.07■□□□□ 0
CDK5RAP3-227ENST00000583352 TMEM2Q9UHN6 1383 aa15.07■□□□□ 0
CDK5RAP3-227ENST00000583352 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-227ENST00000583352 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-227ENST00000583352 EFCAB6Q5THR3 1501 aa15.05■□□□□ -0
CDK5RAP3-227ENST00000583352 KDM5AP29375 1690 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-227ENST00000583352 IDI1Q13907 227 aa15.03■□□□□ -0
CDK5RAP3-227ENST00000583352 ADGRL2O95490 1459 aa15.02■□□□□ -0
CDK5RAP3-227ENST00000583352 NOS1P29475 1434 aa15.01□□□□□ -0.01
CDK5RAP3-227ENST00000583352 FAM50AQ14320 339 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-227ENST00000583352 XIRP1Q702N8 1843 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-227ENST00000583352 ADGRB3O60242 1522 aa15□□□□□ -0.01
CDK5RAP3-227ENST00000583352 KCNA6P17658 529 aa14.99□□□□□ -0.01
CDK5RAP3-227ENST00000583352 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
CDK5RAP3-227ENST00000583352 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
CDK5RAP3-227ENST00000583352 TMEM94Q12767 1356 aa14.98□□□□□ -0.01
CDK5RAP3-227ENST00000583352 RPRD2Q5VT52 1461 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-227ENST00000583352 SLC26A8Q96RN1 970 aa14.97□□□□□ -0.01
CDK5RAP3-227ENST00000583352 TET3O43151 1660 aa14.97□□□□□ -0.01
CDK5RAP3-227ENST00000583352 FAM135BQ49AJ0 1406 aa14.96□□□□□ -0.01
CDK5RAP3-227ENST00000583352 PROSER2Q86WR7 435 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-227ENST00000583352 BCANQ96GW7 911 aa14.96□□□□□ -0.01
CDK5RAP3-227ENST00000583352 NKTRP30414 1462 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms