RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
CDK5RAP3-227ENST00000583352 ABCC9O60706 1549 aa21.91■■□□□ 1.1
CDK5RAP3-227ENST00000583352 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
CDK5RAP3-227ENST00000583352 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
CDK5RAP3-227ENST00000583352 NACADO15069 1562 aa20.68■□□□□ 0.9
CDK5RAP3-227ENST00000583352 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.89
CDK5RAP3-227ENST00000583352 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
CDK5RAP3-227ENST00000583352 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
CDK5RAP3-227ENST00000583352 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
CDK5RAP3-227ENST00000583352 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.85
CDK5RAP3-227ENST00000583352 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
CDK5RAP3-227ENST00000583352 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP3-227ENST00000583352 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
CDK5RAP3-227ENST00000583352 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
CDK5RAP3-227ENST00000583352 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
CDK5RAP3-227ENST00000583352 CC2D2AQ9P2K1 1620 aa19.79■□□□□ 0.76
CDK5RAP3-227ENST00000583352 CECR2Q9BXF3 1484 aa19.76■□□□□ 0.75
CDK5RAP3-227ENST00000583352 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
CDK5RAP3-227ENST00000583352 NCAPD3P42695 1498 aa19.08■□□□□ 0.64
CDK5RAP3-227ENST00000583352 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
CDK5RAP3-227ENST00000583352 DNAJC5Q9H3Z4 198 aa18.99■□□□□ 0.63
CDK5RAP3-227ENST00000583352 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
CDK5RAP3-227ENST00000583352 SMARCA2P51531 1590 aa18.97■□□□□ 0.63
CDK5RAP3-227ENST00000583352 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
CDK5RAP3-227ENST00000583352 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
CDK5RAP3-227ENST00000583352 CUX2O14529 1486 aa18.93■□□□□ 0.62
CDK5RAP3-227ENST00000583352 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
CDK5RAP3-227ENST00000583352 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-227ENST00000583352 NESP48681 1621 aa18.79■□□□□ 0.6
CDK5RAP3-227ENST00000583352 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
CDK5RAP3-227ENST00000583352 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
CDK5RAP3-227ENST00000583352 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
CDK5RAP3-227ENST00000583352 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-227ENST00000583352 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
CDK5RAP3-227ENST00000583352 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
CDK5RAP3-227ENST00000583352 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
CDK5RAP3-227ENST00000583352 WIZO95785 1651 aa18.49■□□□□ 0.55
CDK5RAP3-227ENST00000583352 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
CDK5RAP3-227ENST00000583352 WDR62O43379 1518 aa18.36■□□□□ 0.53
CDK5RAP3-227ENST00000583352 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.52
CDK5RAP3-227ENST00000583352 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-227ENST00000583352 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
CDK5RAP3-227ENST00000583352 CFTRP13569 1480 aa18.27■□□□□ 0.52
CDK5RAP3-227ENST00000583352 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.51
CDK5RAP3-227ENST00000583352 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
CDK5RAP3-227ENST00000583352 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP3-227ENST00000583352 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
CDK5RAP3-227ENST00000583352 OSCARQ8IYS5 282 aa18.06■□□□□ 0.48
CDK5RAP3-227ENST00000583352 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
CDK5RAP3-227ENST00000583352 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
CDK5RAP3-227ENST00000583352 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
CDK5RAP3-227ENST00000583352 ZNF608Q9ULD9 1512 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-227ENST00000583352 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
CDK5RAP3-227ENST00000583352 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
CDK5RAP3-227ENST00000583352 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-227ENST00000583352 RIMBP3CA6NJZ7 1639 aa17.81■□□□□ 0.44
CDK5RAP3-227ENST00000583352 RIMBP3BA6NNM3 1639 aa17.81■□□□□ 0.44
CDK5RAP3-227ENST00000583352 RIMBP3Q9UFD9 1639 aa17.81■□□□□ 0.44
CDK5RAP3-227ENST00000583352 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-227ENST00000583352 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
CDK5RAP3-227ENST00000583352 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.432e-7■■■■□ 24.7
CDK5RAP3-227ENST00000583352 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-227ENST00000583352 CHD1O14646 1710 aa17.71■□□□□ 0.43
CDK5RAP3-227ENST00000583352 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
CDK5RAP3-227ENST00000583352 SOGA1O94964 1423 aa17.67■□□□□ 0.42
CDK5RAP3-227ENST00000583352 FBLN2P98095 1184 aa17.67■□□□□ 0.42
CDK5RAP3-227ENST00000583352 TDRD9Q8NDG6 1382 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-227ENST00000583352 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
CDK5RAP3-227ENST00000583352 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
CDK5RAP3-227ENST00000583352 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
CDK5RAP3-227ENST00000583352 CUX1P39880 1505 aa17.59■□□□□ 0.41
CDK5RAP3-227ENST00000583352 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.41
CDK5RAP3-227ENST00000583352 ARAP1Q96P48 1450 aa17.57■□□□□ 0.4
CDK5RAP3-227ENST00000583352 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-227ENST00000583352 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
CDK5RAP3-227ENST00000583352 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-227ENST00000583352 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
CDK5RAP3-227ENST00000583352 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
CDK5RAP3-227ENST00000583352 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-227ENST00000583352 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
CDK5RAP3-227ENST00000583352 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-227ENST00000583352 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
CDK5RAP3-227ENST00000583352 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
CDK5RAP3-227ENST00000583352 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
CDK5RAP3-227ENST00000583352 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
CDK5RAP3-227ENST00000583352 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
CDK5RAP3-227ENST00000583352 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
CDK5RAP3-227ENST00000583352 BIVM-ERCC5R4GMW8 1640 aa17.3■□□□□ 0.36
CDK5RAP3-227ENST00000583352 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
CDK5RAP3-227ENST00000583352 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
CDK5RAP3-227ENST00000583352 FHAD1B1AJZ9 1412 aa17.24■□□□□ 0.35
CDK5RAP3-227ENST00000583352 NUP160Q12769 1436 aa17.24■□□□□ 0.35
CDK5RAP3-227ENST00000583352 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
CDK5RAP3-227ENST00000583352 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.35
CDK5RAP3-227ENST00000583352 ERCC6L2Q5T890 1561 aa17.21■□□□□ 0.35
CDK5RAP3-227ENST00000583352 SHROOM2Q13796 1616 aa17.17■□□□□ 0.34
CDK5RAP3-227ENST00000583352 PRG4Q92954 1404 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-227ENST00000583352 JPH4Q96JJ6 628 aa17.07■□□□□ 0.32
CDK5RAP3-227ENST00000583352 RUSC2Q8N2Y8 1516 aa17.03■□□□□ 0.32
CDK5RAP3-227ENST00000583352 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms