RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 KDM5DQ9BY66 1539 aa24.05■■□□□ 1.44
CCDC57-215ENST00000582100 CAMSAP1Q5T5Y3 1602 aa24.05■■□□□ 1.44
CCDC57-215ENST00000582100 MYO3AQ8NEV4 1616 aa24.05■■□□□ 1.44
CCDC57-215ENST00000582100 ZNF142P52746 1687 aaPredicted RBP24.05■■□□□ 1.44
CCDC57-215ENST00000582100 CEP170BQ9Y4F5 1589 aaPredicted RBP24.03■■□□□ 1.44
CCDC57-215ENST00000582100 PZPP20742 1482 aa24.01■■□□□ 1.43
CCDC57-215ENST00000582100 PTPN23Q9H3S7 1636 aa24■■□□□ 1.43
CCDC57-215ENST00000582100 PLA2R1Q13018 1463 aa24■■□□□ 1.43
CCDC57-215ENST00000582100 RNF17Q9BXT8 1623 aaKnown RBP23.99■■□□□ 1.43
CCDC57-215ENST00000582100 FBXO31Q5XUX0 539 aaPredicted RBP23.99■■□□□ 1.43
CCDC57-215ENST00000582100 ABCC5O15440 1437 aa23.98■■□□□ 1.43
CCDC57-215ENST00000582100 FGD6Q6ZV73 1430 aa23.98■■□□□ 1.43
CCDC57-215ENST00000582100 A2ML1A8K2U0 1454 aa23.98■■□□□ 1.43
CCDC57-215ENST00000582100 EIF2AK4Q9P2K8 1649 aaKnown RBP23.98■■□□□ 1.43
CCDC57-215ENST00000582100 PKD2Q13563 968 aa23.97■■□□□ 1.43
CCDC57-215ENST00000582100 TNRQ92752 1358 aa23.97■■□□□ 1.43
CCDC57-215ENST00000582100 NCKAP5LQ9HCH0 1330 aa23.97■■□□□ 1.43
CCDC57-215ENST00000582100 SHANK2Q9UPX8 1470 aa23.97■■□□□ 1.43
CCDC57-215ENST00000582100 DUOX2Q9NRD8 1548 aa23.96■■□□□ 1.43
CCDC57-215ENST00000582100 TCOF1Q13428 1488 aaKnown RBP23.96■■□□□ 1.43
CCDC57-215ENST00000582100 CROCC2H7BZ55 1655 aa23.93■■□□□ 1.42
CCDC57-215ENST00000582100 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
CCDC57-215ENST00000582100 DAPK1P53355 1430 aa23.93■■□□□ 1.42
CCDC57-215ENST00000582100 KIF15Q9NS87 1388 aa23.92■■□□□ 1.42
CCDC57-215ENST00000582100 ABCC3O15438 1527 aa23.92■■□□□ 1.42
CCDC57-215ENST00000582100 ZC3H13Q5T200 1668 aaKnown RBP23.92■■□□□ 1.42
CCDC57-215ENST00000582100 RRP7BPQ9NSQ0 103 aa23.9■■□□□ 1.42
CCDC57-215ENST00000582100 LTBP4Q8N2S1 1624 aa23.9■■□□□ 1.42
CCDC57-215ENST00000582100 MROH1Q8NDA8 1641 aa23.9■■□□□ 1.42
CCDC57-215ENST00000582100 ERBINQ96RT1 1412 aa23.89■■□□□ 1.41
CCDC57-215ENST00000582100 NLRP1Q9C000 1473 aa23.88■■□□□ 1.41
CCDC57-215ENST00000582100 THEMISQ8N1K5 641 aaPredicted RBP23.85■■□□□ 1.41
CCDC57-215ENST00000582100 SPATA31D1Q6ZQQ2 1576 aa23.84■■□□□ 1.41
CCDC57-215ENST00000582100 ANKRD30AQ9BXX3 1397 aa23.84■■□□□ 1.41
CCDC57-215ENST00000582100 IQSEC2Q5JU85 1478 aa23.82■■□□□ 1.4
CCDC57-215ENST00000582100 CHIC2Q9UKJ5 165 aa23.82■■□□□ 1.4
CCDC57-215ENST00000582100 PRDM15P57071 1507 aaPredicted RBP23.82■■□□□ 1.4
CCDC57-215ENST00000582100 CEP152O94986 1710 aa23.81■■□□□ 1.4
CCDC57-215ENST00000582100 ERVK-7P63135 1459 aa23.81■■□□□ 1.4
CCDC57-215ENST00000582100 UGGT1Q9NYU2 1555 aa23.81■■□□□ 1.4
CCDC57-215ENST00000582100 ZNF335Q9H4Z2 1342 aaPredicted RBP23.81■■□□□ 1.4
CCDC57-215ENST00000582100 ANKLE2Q86XL3 938 aa23.8■■□□□ 1.4
CCDC57-215ENST00000582100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCDC57-215ENST00000582100 ARHGAP31Q2M1Z3 1444 aa23.79■■□□□ 1.4
CCDC57-215ENST00000582100 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
CCDC57-215ENST00000582100 DEPDC5O75140 1603 aa23.78■■□□□ 1.4
CCDC57-215ENST00000582100 FAM50AQ14320 339 aaKnown RBP23.78■■□□□ 1.4
CCDC57-215ENST00000582100 ADGRL2O95490 1459 aa23.77■■□□□ 1.4
CCDC57-215ENST00000582100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.77■■□□□ 1.4
CCDC57-215ENST00000582100 NEURL4Q96JN8 1562 aa23.77■■□□□ 1.4
CCDC57-215ENST00000582100 KANK1Q14678 1352 aa23.76■■□□□ 1.39
CCDC57-215ENST00000582100 CFAP65Q6ZU64 1925 aaKnown RBP23.74■■□□□ 1.39
CCDC57-215ENST00000582100 MED14O60244 1454 aa23.72■■□□□ 1.39
CCDC57-215ENST00000582100 VWDEQ8N2E2 1590 aa23.7■■□□□ 1.38
CCDC57-215ENST00000582100 LMTK2Q8IWU2 1503 aa23.7■■□□□ 1.38
CCDC57-215ENST00000582100 NPHP4O75161 1426 aaPredicted RBP23.68■■□□□ 1.38
CCDC57-215ENST00000582100 UBR1Q8IWV7 1749 aa23.67■■□□□ 1.38
CCDC57-215ENST00000582100 ANKRD50Q9ULJ7 1429 aa23.67■■□□□ 1.38
CCDC57-215ENST00000582100 CPS1P31327 1500 aa23.64■■□□□ 1.37
CCDC57-215ENST00000582100 IQGAP1P46940 1657 aa23.63■■□□□ 1.37
CCDC57-215ENST00000582100 SLIT1O75093 1534 aa23.61■■□□□ 1.37
CCDC57-215ENST00000582100 UBAP1LF5GYI3 381 aa23.61■■□□□ 1.37
CCDC57-215ENST00000582100 ARHGAP23Q9P227 1491 aa23.61■■□□□ 1.37
CCDC57-215ENST00000582100 EFCAB6Q5THR3 1501 aa23.6■■□□□ 1.37
CCDC57-215ENST00000582100 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
CCDC57-215ENST00000582100 SCAF11Q99590 1463 aaKnown RBP23.59■■□□□ 1.37
CCDC57-215ENST00000582100 NOS1P29475 1434 aa23.59■■□□□ 1.37
CCDC57-215ENST00000582100 LTKP29376 864 aa23.58■■□□□ 1.37
CCDC57-215ENST00000582100 IDI1Q13907 227 aa23.58■■□□□ 1.37
CCDC57-215ENST00000582100 TXNDC2Q86VQ3 553 aa23.58■■□□□ 1.37
CCDC57-215ENST00000582100 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
CCDC57-215ENST00000582100 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
CCDC57-215ENST00000582100 STAG3Q9UJ98 1225 aa23.56■■□□□ 1.36
CCDC57-215ENST00000582100 EID1Q9Y6B2 187 aa23.56■■□□□ 1.36
CCDC57-215ENST00000582100 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
CCDC57-215ENST00000582100 RPRD2Q5VT52 1461 aaKnown RBP23.56■■□□□ 1.36
CCDC57-215ENST00000582100 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
CCDC57-215ENST00000582100 SYNMO15061 1565 aa23.55■■□□□ 1.36
CCDC57-215ENST00000582100 TMEM2Q9UHN6 1383 aa23.54■■□□□ 1.36
CCDC57-215ENST00000582100 UNC13BO14795 1591 aa23.52■■□□□ 1.36
CCDC57-215ENST00000582100 TET3O43151 1660 aa23.51■■□□□ 1.35
CCDC57-215ENST00000582100 TOM1O60784 492 aa23.5■■□□□ 1.35
CCDC57-215ENST00000582100 ITGAEP38570 1179 aa23.49■■□□□ 1.35
CCDC57-215ENST00000582100 STRCP1A6NGW2 1772 aa23.47■■□□□ 1.35
CCDC57-215ENST00000582100 ADGRB3O60242 1522 aa23.47■■□□□ 1.35
CCDC57-215ENST00000582100 GCC2Q8IWJ2 1684 aa23.47■■□□□ 1.35
CCDC57-215ENST00000582100 LRRC7Q96NW7 1537 aa23.45■■□□□ 1.34
CCDC57-215ENST00000582100 IQGAP3Q86VI3 1631 aa23.43■■□□□ 1.34
CCDC57-215ENST00000582100 PIP4K2BP78356 416 aa23.42■■□□□ 1.34
CCDC57-215ENST00000582100 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
CCDC57-215ENST00000582100 NUP155O75694 1391 aa23.41■■□□□ 1.34
CCDC57-215ENST00000582100 DISP3Q9P2K9 1392 aa23.4■■□□□ 1.34
CCDC57-215ENST00000582100 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
CCDC57-215ENST00000582100 E9PCH4 1651 aa23.4■■□□□ 1.34
CCDC57-215ENST00000582100 ALKQ9UM73 1620 aa23.37■■□□□ 1.33
CCDC57-215ENST00000582100 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
CCDC57-215ENST00000582100 TMEM131LA2VDJ0 1609 aa23.36■■□□□ 1.33
CCDC57-215ENST00000582100 ZFYVE9O95405 1425 aa23.35■■□□□ 1.33
CCDC57-215ENST00000582100 HSPA1LP34931 641 aa23.35■■□□□ 1.33
CCDC57-215ENST00000582100 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms