RNA–Protein interactions for RNA: ENST00000579225.2

SRGAP2-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 1,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-204ENST00000579225 NCOA2Q15596 1464 aa26.88■■□□□ 1.89
SRGAP2-204ENST00000579225 CCDC141Q6ZP82 1450 aa26.88■■□□□ 1.89
SRGAP2-204ENST00000579225 SOCS7O14512 581 aa26.88■■□□□ 1.89
SRGAP2-204ENST00000579225 DNMT1P26358 1616 aaKnown RBP26.87■■□□□ 1.89
SRGAP2-204ENST00000579225 SPATA31D1Q6ZQQ2 1576 aa26.86■■□□□ 1.89
SRGAP2-204ENST00000579225 CAMSAP2Q08AD1 1489 aa26.86■■□□□ 1.89
SRGAP2-204ENST00000579225 TNRQ92752 1358 aa26.84■■□□□ 1.89
SRGAP2-204ENST00000579225 WASHC2CQ9Y4E1 1318 aa26.83■■□□□ 1.89
SRGAP2-204ENST00000579225 PZPP20742 1482 aa26.81■■□□□ 1.88
SRGAP2-204ENST00000579225 KDM5DQ9BY66 1539 aa26.81■■□□□ 1.88
SRGAP2-204ENST00000579225 FAM135AQ9P2D6 1515 aa26.8■■□□□ 1.88
SRGAP2-204ENST00000579225 TSPY4P0CV99 314 aa26.8■■□□□ 1.88
SRGAP2-204ENST00000579225 TSPY10P0CW01 314 aa26.8■■□□□ 1.88
SRGAP2-204ENST00000579225 ARHGEF5Q12774 1597 aa26.76■■□□□ 1.87
SRGAP2-204ENST00000579225 VPS8Q8N3P4 1428 aa26.75■■□□□ 1.87
SRGAP2-204ENST00000579225 MIA2Q96PC5 1412 aa26.75■■□□□ 1.87
SRGAP2-204ENST00000579225 ANKLE2Q86XL3 938 aa26.74■■□□□ 1.87
SRGAP2-204ENST00000579225 THEMISQ8N1K5 641 aaPredicted RBP26.74■■□□□ 1.87
SRGAP2-204ENST00000579225 NEURL4Q96JN8 1562 aa26.74■■□□□ 1.87
SRGAP2-204ENST00000579225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.73■■□□□ 1.87
SRGAP2-204ENST00000579225 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
SRGAP2-204ENST00000579225 NLRP1Q9C000 1473 aa26.71■■□□□ 1.87
SRGAP2-204ENST00000579225 SHANK2Q9UPX8 1470 aa26.7■■□□□ 1.87
SRGAP2-204ENST00000579225 CPS1P31327 1500 aa26.7■■□□□ 1.86
SRGAP2-204ENST00000579225 LRRC9Q6ZRR7 1453 aa26.69■■□□□ 1.86
SRGAP2-204ENST00000579225 UGGT1Q9NYU2 1555 aa26.67■■□□□ 1.86
SRGAP2-204ENST00000579225 TOM1O60784 492 aa26.66■■□□□ 1.86
SRGAP2-204ENST00000579225 MED14O60244 1454 aa26.64■■□□□ 1.86
SRGAP2-204ENST00000579225 PIP4K2BP78356 416 aa26.64■■□□□ 1.86
SRGAP2-204ENST00000579225 SCAF1Q9H7N4 1312 aaKnown RBP26.64■■□□□ 1.85
SRGAP2-204ENST00000579225 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
SRGAP2-204ENST00000579225 KANK4Q5T7N3 995 aaPredicted RBP26.63■■□□□ 1.85
SRGAP2-204ENST00000579225 RNF17Q9BXT8 1623 aaKnown RBP26.63■■□□□ 1.85
SRGAP2-204ENST00000579225 NPHP4O75161 1426 aaPredicted RBP26.63■■□□□ 1.85
SRGAP2-204ENST00000579225 HSPA1LP34931 641 aa26.62■■□□□ 1.85
SRGAP2-204ENST00000579225 VWDEQ8N2E2 1590 aa26.62■■□□□ 1.85
SRGAP2-204ENST00000579225 DEPDC5O75140 1603 aa26.61■■□□□ 1.85
SRGAP2-204ENST00000579225 ABCC3O15438 1527 aa26.61■■□□□ 1.85
SRGAP2-204ENST00000579225 MAP3K1Q13233 1512 aa26.61■■□□□ 1.85
SRGAP2-204ENST00000579225 APLP2Q06481 763 aa26.58■■□□□ 1.85
SRGAP2-204ENST00000579225 ZC3H13Q5T200 1668 aaKnown RBP26.57■■□□□ 1.84
SRGAP2-204ENST00000579225 EIF2AK4Q9P2K8 1649 aaKnown RBP26.56■■□□□ 1.84
SRGAP2-204ENST00000579225 MYOM3Q5VTT5 1437 aa26.56■■□□□ 1.84
SRGAP2-204ENST00000579225 ERVK-7P63135 1459 aa26.55■■□□□ 1.84
SRGAP2-204ENST00000579225 MROH1Q8NDA8 1641 aa26.54■■□□□ 1.84
SRGAP2-204ENST00000579225 IQGAP1P46940 1657 aa26.53■■□□□ 1.84
SRGAP2-204ENST00000579225 DUOX2Q9NRD8 1548 aa26.49■■□□□ 1.83
SRGAP2-204ENST00000579225 ALKQ9UM73 1620 aa26.49■■□□□ 1.83
SRGAP2-204ENST00000579225 CEP152O94986 1710 aa26.47■■□□□ 1.83
SRGAP2-204ENST00000579225 CFAP65Q6ZU64 1925 aaKnown RBP26.47■■□□□ 1.83
SRGAP2-204ENST00000579225 MED1Q15648 1581 aaPredicted RBP26.46■■□□□ 1.83
SRGAP2-204ENST00000579225 LRRC7Q96NW7 1537 aa26.46■■□□□ 1.83
SRGAP2-204ENST00000579225 STRCP1A6NGW2 1772 aa26.46■■□□□ 1.83
SRGAP2-204ENST00000579225 KIF15Q9NS87 1388 aa26.45■■□□□ 1.82
SRGAP2-204ENST00000579225 RRP7BPQ9NSQ0 103 aa26.44■■□□□ 1.82
SRGAP2-204ENST00000579225 UBR1Q8IWV7 1749 aa26.44■■□□□ 1.82
SRGAP2-204ENST00000579225 ARHGAP31Q2M1Z3 1444 aa26.43■■□□□ 1.82
SRGAP2-204ENST00000579225 LTKP29376 864 aa26.43■■□□□ 1.82
SRGAP2-204ENST00000579225 ABCC5O15440 1437 aa26.42■■□□□ 1.82
SRGAP2-204ENST00000579225 SCAF11Q99590 1463 aaKnown RBP26.42■■□□□ 1.82
SRGAP2-204ENST00000579225 TXNDC2Q86VQ3 553 aa26.41■■□□□ 1.82
SRGAP2-204ENST00000579225 ERBINQ96RT1 1412 aa26.4■■□□□ 1.82
SRGAP2-204ENST00000579225 ARHGAP23Q9P227 1491 aa26.4■■□□□ 1.82
SRGAP2-204ENST00000579225 PRDM15P57071 1507 aaPredicted RBP26.39■■□□□ 1.82
SRGAP2-204ENST00000579225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.38■■□□□ 1.81
SRGAP2-204ENST00000579225 SLIT1O75093 1534 aa26.38■■□□□ 1.81
SRGAP2-204ENST00000579225 SYNMO15061 1565 aa26.37■■□□□ 1.81
SRGAP2-204ENST00000579225 PTPN23Q9H3S7 1636 aa26.36■■□□□ 1.81
SRGAP2-204ENST00000579225 EID1Q9Y6B2 187 aa26.35■■□□□ 1.81
SRGAP2-204ENST00000579225 CROCC2H7BZ55 1655 aa26.34■■□□□ 1.81
SRGAP2-204ENST00000579225 DAPK1P53355 1430 aa26.34■■□□□ 1.81
SRGAP2-204ENST00000579225 SENP3Q9H4L4 574 aaPredicted RBP26.33■■□□□ 1.81
SRGAP2-204ENST00000579225 KANK1Q14678 1352 aa26.32■■□□□ 1.8
SRGAP2-204ENST00000579225 PHF23Q9BUL5 403 aaPredicted RBP26.31■■□□□ 1.8
SRGAP2-204ENST00000579225 TMEM2Q9UHN6 1383 aa26.3■■□□□ 1.8
SRGAP2-204ENST00000579225 PIK3C2BO00750 1634 aa26.29■■□□□ 1.8
SRGAP2-204ENST00000579225 STAG3Q9UJ98 1225 aa26.29■■□□□ 1.8
SRGAP2-204ENST00000579225 CHIC2Q9UKJ5 165 aa26.29■■□□□ 1.8
SRGAP2-204ENST00000579225 FGD6Q6ZV73 1430 aa26.29■■□□□ 1.8
SRGAP2-204ENST00000579225 IDI1Q13907 227 aa26.28■■□□□ 1.8
SRGAP2-204ENST00000579225 ANKRD30AQ9BXX3 1397 aa26.27■■□□□ 1.8
SRGAP2-204ENST00000579225 LMTK2Q8IWU2 1503 aa26.25■■□□□ 1.79
SRGAP2-204ENST00000579225 XIRP1Q702N8 1843 aaKnown RBP26.23■■□□□ 1.79
SRGAP2-204ENST00000579225 EFCAB6Q5THR3 1501 aa26.22■■□□□ 1.79
SRGAP2-204ENST00000579225 KDM5AP29375 1690 aaKnown RBP26.21■■□□□ 1.79
SRGAP2-204ENST00000579225 KCNA6P17658 529 aa26.19■■□□□ 1.78
SRGAP2-204ENST00000579225 NOS1P29475 1434 aa26.19■■□□□ 1.78
SRGAP2-204ENST00000579225 SLC26A8Q96RN1 970 aa26.18■■□□□ 1.78
SRGAP2-204ENST00000579225 FAM135BQ49AJ0 1406 aa26.17■■□□□ 1.78
SRGAP2-204ENST00000579225 TET3O43151 1660 aa26.17■■□□□ 1.78
SRGAP2-204ENST00000579225 TMEM94Q12767 1356 aa26.17■■□□□ 1.78
SRGAP2-204ENST00000579225 SLC52A1Q9NWF4 448 aa26.15■■□□□ 1.78
SRGAP2-204ENST00000579225 PROSER2Q86WR7 435 aaPredicted RBP26.14■■□□□ 1.78
SRGAP2-204ENST00000579225 ADGRL2O95490 1459 aa26.13■■□□□ 1.77
SRGAP2-204ENST00000579225 RGS17Q9UGC6 210 aaPredicted RBP26.13■■□□□ 1.77
SRGAP2-204ENST00000579225 RBM33Q96EV2 1170 aaKnown RBP26.11■■□□□ 1.77
SRGAP2-204ENST00000579225 ADGRB3O60242 1522 aa26.1■■□□□ 1.77
SRGAP2-204ENST00000579225 FAM50AQ14320 339 aaKnown RBP26.09■■□□□ 1.77
SRGAP2-204ENST00000579225 ANKRD50Q9ULJ7 1429 aa26.07■■□□□ 1.76
SRGAP2-204ENST00000579225 BCANQ96GW7 911 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms