RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 KDM5DQ9BY66 1539 aa30.64■■■□□ 2.5
CDKN2A-213ENST00000579122 DNMT1P26358 1616 aaKnown RBP30.63■■■□□ 2.49
CDKN2A-213ENST00000579122 ARHGEF5Q12774 1597 aa30.62■■■□□ 2.49
CDKN2A-213ENST00000579122 PZPP20742 1482 aa30.61■■■□□ 2.49
CDKN2A-213ENST00000579122 TNRQ92752 1358 aa30.6■■■□□ 2.49
CDKN2A-213ENST00000579122 WASHC2CQ9Y4E1 1318 aa30.59■■■□□ 2.49
CDKN2A-213ENST00000579122 TSPY4P0CV99 314 aa30.58■■■□□ 2.49
CDKN2A-213ENST00000579122 TSPY10P0CW01 314 aa30.58■■■□□ 2.49
CDKN2A-213ENST00000579122 FBXO31Q5XUX0 539 aaPredicted RBP30.58■■■□□ 2.49
CDKN2A-213ENST00000579122 VPS8Q8N3P4 1428 aa30.56■■■□□ 2.48
CDKN2A-213ENST00000579122 LRRC9Q6ZRR7 1453 aa30.56■■■□□ 2.48
CDKN2A-213ENST00000579122 UBAP1LF5GYI3 381 aa30.53■■■□□ 2.48
CDKN2A-213ENST00000579122 ILDR2Q71H61 639 aa30.53■■■□□ 2.48
CDKN2A-213ENST00000579122 SPATA31D1Q6ZQQ2 1576 aa30.53■■■□□ 2.48
CDKN2A-213ENST00000579122 POLR1AO95602 1720 aaPredicted RBP30.5■■■□□ 2.47
CDKN2A-213ENST00000579122 MIA2Q96PC5 1412 aa30.49■■■□□ 2.47
CDKN2A-213ENST00000579122 NEURL4Q96JN8 1562 aa30.49■■■□□ 2.47
CDKN2A-213ENST00000579122 MAST1Q9Y2H9 1570 aa30.49■■■□□ 2.47
CDKN2A-213ENST00000579122 NLRP1Q9C000 1473 aa30.48■■■□□ 2.47
CDKN2A-213ENST00000579122 MAP3K1Q13233 1512 aa30.46■■■□□ 2.47
CDKN2A-213ENST00000579122 RNF17Q9BXT8 1623 aaKnown RBP30.45■■■□□ 2.47
CDKN2A-213ENST00000579122 THEMISQ8N1K5 641 aaPredicted RBP30.45■■■□□ 2.47
CDKN2A-213ENST00000579122 ANKLE2Q86XL3 938 aa30.44■■■□□ 2.46
CDKN2A-213ENST00000579122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.43■■■□□ 2.46
CDKN2A-213ENST00000579122 LOC105371045A0A1W2PR82 267 aa30.43■■■□□ 2.46
CDKN2A-213ENST00000579122 UGGT1Q9NYU2 1555 aa30.42■■■□□ 2.46
CDKN2A-213ENST00000579122 SOCS7O14512 581 aa30.42■■■□□ 2.46
CDKN2A-213ENST00000579122 CPS1P31327 1500 aa30.42■■■□□ 2.46
CDKN2A-213ENST00000579122 KANK4Q5T7N3 995 aaPredicted RBP30.41■■■□□ 2.46
CDKN2A-213ENST00000579122 ABCC3O15438 1527 aa30.41■■■□□ 2.46
CDKN2A-213ENST00000579122 EIF2AK4Q9P2K8 1649 aaKnown RBP30.4■■■□□ 2.46
CDKN2A-213ENST00000579122 ZC3H13Q5T200 1668 aaKnown RBP30.4■■■□□ 2.46
CDKN2A-213ENST00000579122 SHANK2Q9UPX8 1470 aa30.4■■■□□ 2.46
CDKN2A-213ENST00000579122 MYOM3Q5VTT5 1437 aa30.39■■■□□ 2.46
CDKN2A-213ENST00000579122 MED14O60244 1454 aa30.38■■■□□ 2.45
CDKN2A-213ENST00000579122 DEPDC5O75140 1603 aa30.36■■■□□ 2.45
CDKN2A-213ENST00000579122 NPHP4O75161 1426 aaPredicted RBP30.34■■■□□ 2.45
CDKN2A-213ENST00000579122 VWDEQ8N2E2 1590 aa30.33■■■□□ 2.45
CDKN2A-213ENST00000579122 MROH1Q8NDA8 1641 aa30.33■■■□□ 2.45
CDKN2A-213ENST00000579122 ERVK-7P63135 1459 aa30.31■■■□□ 2.44
CDKN2A-213ENST00000579122 DUOX2Q9NRD8 1548 aa30.31■■■□□ 2.44
CDKN2A-213ENST00000579122 TOM1O60784 492 aa30.3■■■□□ 2.44
CDKN2A-213ENST00000579122 IQGAP1P46940 1657 aa30.27■■■□□ 2.44
CDKN2A-213ENST00000579122 SCAF1Q9H7N4 1312 aaKnown RBP30.25■■■□□ 2.43
CDKN2A-213ENST00000579122 PIP4K2BP78356 416 aa30.24■■■□□ 2.43
CDKN2A-213ENST00000579122 CEP152O94986 1710 aa30.24■■■□□ 2.43
CDKN2A-213ENST00000579122 HSPA1LP34931 641 aa30.22■■■□□ 2.43
CDKN2A-213ENST00000579122 KIF15Q9NS87 1388 aa30.22■■■□□ 2.43
CDKN2A-213ENST00000579122 ABCC5O15440 1437 aa30.21■■■□□ 2.43
CDKN2A-213ENST00000579122 ERBINQ96RT1 1412 aa30.21■■■□□ 2.43
CDKN2A-213ENST00000579122 PRDM15P57071 1507 aaPredicted RBP30.2■■■□□ 2.42
CDKN2A-213ENST00000579122 CROCC2H7BZ55 1655 aa30.19■■■□□ 2.42
CDKN2A-213ENST00000579122 ARHGAP31Q2M1Z3 1444 aa30.19■■■□□ 2.42
CDKN2A-213ENST00000579122 UBR1Q8IWV7 1749 aa30.18■■■□□ 2.42
CDKN2A-213ENST00000579122 PTPN23Q9H3S7 1636 aa30.18■■■□□ 2.42
CDKN2A-213ENST00000579122 APLP2Q06481 763 aa30.16■■■□□ 2.42
CDKN2A-213ENST00000579122 RRP7BPQ9NSQ0 103 aa30.15■■■□□ 2.42
CDKN2A-213ENST00000579122 ALKQ9UM73 1620 aa30.14■■■□□ 2.41
CDKN2A-213ENST00000579122 LRRC7Q96NW7 1537 aa30.13■■■□□ 2.41
CDKN2A-213ENST00000579122 STRCP1A6NGW2 1772 aa30.13■■■□□ 2.41
CDKN2A-213ENST00000579122 DAPK1P53355 1430 aa30.13■■■□□ 2.41
CDKN2A-213ENST00000579122 SCAF11Q99590 1463 aaKnown RBP30.12■■■□□ 2.41
CDKN2A-213ENST00000579122 CFAP65Q6ZU64 1925 aaKnown RBP30.12■■■□□ 2.41
CDKN2A-213ENST00000579122 ARHGAP23Q9P227 1491 aa30.12■■■□□ 2.41
CDKN2A-213ENST00000579122 SLIT1O75093 1534 aa30.12■■■□□ 2.41
CDKN2A-213ENST00000579122 SYNMO15061 1565 aa30.11■■■□□ 2.41
CDKN2A-213ENST00000579122 FGD6Q6ZV73 1430 aa30.1■■■□□ 2.41
CDKN2A-213ENST00000579122 MED1Q15648 1581 aaPredicted RBP30.08■■■□□ 2.41
CDKN2A-213ENST00000579122 KANK1Q14678 1352 aa30.07■■■□□ 2.4
CDKN2A-213ENST00000579122 LTKP29376 864 aa30.07■■■□□ 2.4
CDKN2A-213ENST00000579122 TXNDC2Q86VQ3 553 aa30.07■■■□□ 2.4
CDKN2A-213ENST00000579122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.07■■■□□ 2.4
CDKN2A-213ENST00000579122 ANKRD30AQ9BXX3 1397 aa30.04■■■□□ 2.4
CDKN2A-213ENST00000579122 EID1Q9Y6B2 187 aa30.03■■■□□ 2.4
CDKN2A-213ENST00000579122 LMTK2Q8IWU2 1503 aa30.02■■■□□ 2.4
CDKN2A-213ENST00000579122 PIK3C2BO00750 1634 aa30.01■■■□□ 2.39
CDKN2A-213ENST00000579122 TMEM2Q9UHN6 1383 aa30■■■□□ 2.39
CDKN2A-213ENST00000579122 CHIC2Q9UKJ5 165 aa29.99■■■□□ 2.39
CDKN2A-213ENST00000579122 KDM5AP29375 1690 aaKnown RBP29.97■■■□□ 2.39
CDKN2A-213ENST00000579122 STAG3Q9UJ98 1225 aa29.96■■■□□ 2.39
CDKN2A-213ENST00000579122 EFCAB6Q5THR3 1501 aa29.94■■■□□ 2.38
CDKN2A-213ENST00000579122 IDI1Q13907 227 aa29.93■■■□□ 2.38
CDKN2A-213ENST00000579122 ADGRL2O95490 1459 aa29.92■■■□□ 2.38
CDKN2A-213ENST00000579122 NOS1P29475 1434 aa29.9■■■□□ 2.38
CDKN2A-213ENST00000579122 XIRP1Q702N8 1843 aaKnown RBP29.88■■■□□ 2.37
CDKN2A-213ENST00000579122 PHF23Q9BUL5 403 aaPredicted RBP29.88■■■□□ 2.37
CDKN2A-213ENST00000579122 SENP3Q9H4L4 574 aaPredicted RBP29.87■■■□□ 2.37
CDKN2A-213ENST00000579122 SLC52A1Q9NWF4 448 aa29.84■■■□□ 2.37
CDKN2A-213ENST00000579122 ADGRB3O60242 1522 aa29.84■■■□□ 2.37
CDKN2A-213ENST00000579122 TET3O43151 1660 aa29.84■■■□□ 2.37
CDKN2A-213ENST00000579122 KCNA6P17658 529 aa29.82■■■□□ 2.36
CDKN2A-213ENST00000579122 RPRD2Q5VT52 1461 aaKnown RBP29.81■■■□□ 2.36
CDKN2A-213ENST00000579122 ANKRD50Q9ULJ7 1429 aa29.81■■■□□ 2.36
CDKN2A-213ENST00000579122 FAM50AQ14320 339 aaKnown RBP29.81■■■□□ 2.36
CDKN2A-213ENST00000579122 TMEM94Q12767 1356 aa29.8■■■□□ 2.36
CDKN2A-213ENST00000579122 SLC26A8Q96RN1 970 aa29.79■■■□□ 2.36
CDKN2A-213ENST00000579122 FAM135BQ49AJ0 1406 aa29.79■■■□□ 2.36
CDKN2A-213ENST00000579122 PROSER2Q86WR7 435 aaPredicted RBP29.74■■■□□ 2.35
CDKN2A-213ENST00000579122 NKTRP30414 1462 aaKnown RBP29.73■■■□□ 2.35
CDKN2A-213ENST00000579122 NWD1Q149M9 1564 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms