RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 TSPY10P0CW01 314 aa19.88■□□□□ 0.77
SSH2-205ENST00000577483 CEP152O94986 1710 aa19.87■□□□□ 0.77
SSH2-205ENST00000577483 PTPRKQ15262 1439 aa19.87■□□□□ 0.77
SSH2-205ENST00000577483 SHANK2Q9UPX8 1470 aa19.87■□□□□ 0.77
SSH2-205ENST00000577483 ZC3H13Q5T200 1668 aaKnown RBP19.87■□□□□ 0.77
SSH2-205ENST00000577483 KIF3BO15066 747 aa19.87■□□□□ 0.77
SSH2-205ENST00000577483 ABCC5O15440 1437 aa19.85■□□□□ 0.77
SSH2-205ENST00000577483 CEP170BQ9Y4F5 1589 aaPredicted RBP19.85■□□□□ 0.77
SSH2-205ENST00000577483 DAPK1P53355 1430 aa19.84■□□□□ 0.77
SSH2-205ENST00000577483 DUOX2Q9NRD8 1548 aa19.84■□□□□ 0.77
SSH2-205ENST00000577483 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
SSH2-205ENST00000577483 ILDR1Q86SU0 546 aaPredicted RBP19.83■□□□□ 0.76
SSH2-205ENST00000577483 CAMSAP1Q5T5Y3 1602 aa19.82■□□□□ 0.76
SSH2-205ENST00000577483 PZPP20742 1482 aa19.8■□□□□ 0.76
SSH2-205ENST00000577483 CFAP65Q6ZU64 1925 aaKnown RBP19.8■□□□□ 0.76
SSH2-205ENST00000577483 DEPDC5O75140 1603 aa19.8■□□□□ 0.76
SSH2-205ENST00000577483 ABCC3O15438 1527 aa19.8■□□□□ 0.76
SSH2-205ENST00000577483 NCOA1Q15788 1441 aa19.79■□□□□ 0.76
SSH2-205ENST00000577483 PRDM15P57071 1507 aaPredicted RBP19.78■□□□□ 0.76
SSH2-205ENST00000577483 KIF15Q9NS87 1388 aa19.77■□□□□ 0.76
SSH2-205ENST00000577483 POLR1AO95602 1720 aaPredicted RBP19.76■□□□□ 0.75
SSH2-205ENST00000577483 WASHC2CQ9Y4E1 1318 aa19.75■□□□□ 0.75
SSH2-205ENST00000577483 ERBINQ96RT1 1412 aa19.75■□□□□ 0.75
SSH2-205ENST00000577483 A2ML1A8K2U0 1454 aa19.73■□□□□ 0.75
SSH2-205ENST00000577483 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
SSH2-205ENST00000577483 SPATA31D1Q6ZQQ2 1576 aa19.72■□□□□ 0.75
SSH2-205ENST00000577483 PTPRTO14522 1441 aa19.72■□□□□ 0.75
SSH2-205ENST00000577483 ADGRL2O95490 1459 aa19.72■□□□□ 0.75
SSH2-205ENST00000577483 PLA2R1Q13018 1463 aa19.72■□□□□ 0.75
SSH2-205ENST00000577483 TNRQ92752 1358 aa19.7■□□□□ 0.74
SSH2-205ENST00000577483 RRP7BPQ9NSQ0 103 aa19.7■□□□□ 0.74
SSH2-205ENST00000577483 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
SSH2-205ENST00000577483 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
SSH2-205ENST00000577483 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
SSH2-205ENST00000577483 VWDEQ8N2E2 1590 aa19.67■□□□□ 0.74
SSH2-205ENST00000577483 ERVK-7P63135 1459 aa19.67■□□□□ 0.74
SSH2-205ENST00000577483 NEURL4Q96JN8 1562 aa19.66■□□□□ 0.74
SSH2-205ENST00000577483 FAM50AQ14320 339 aaKnown RBP19.66■□□□□ 0.74
SSH2-205ENST00000577483 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
SSH2-205ENST00000577483 FBXO41Q8TF61 875 aa19.65■□□□□ 0.74
SSH2-205ENST00000577483 UBR1Q8IWV7 1749 aa19.65■□□□□ 0.74
SSH2-205ENST00000577483 NLRP1Q9C000 1473 aa19.65■□□□□ 0.74
SSH2-205ENST00000577483 UGGT1Q9NYU2 1555 aa19.64■□□□□ 0.73
SSH2-205ENST00000577483 NCKAP5LQ9HCH0 1330 aa19.64■□□□□ 0.73
SSH2-205ENST00000577483 CERKQ8TCT0 537 aa19.62■□□□□ 0.73
SSH2-205ENST00000577483 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
SSH2-205ENST00000577483 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
SSH2-205ENST00000577483 ARHGAP31Q2M1Z3 1444 aa19.6■□□□□ 0.73
SSH2-205ENST00000577483 UNC13BO14795 1591 aa19.59■□□□□ 0.73
SSH2-205ENST00000577483 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
SSH2-205ENST00000577483 PKD2Q13563 968 aa19.58■□□□□ 0.73
SSH2-205ENST00000577483 PIK3C2BO00750 1634 aa19.58■□□□□ 0.73
SSH2-205ENST00000577483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.72
SSH2-205ENST00000577483 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
SSH2-205ENST00000577483 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
SSH2-205ENST00000577483 ANKRD50Q9ULJ7 1429 aa19.57■□□□□ 0.72
SSH2-205ENST00000577483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.56■□□□□ 0.72
SSH2-205ENST00000577483 TET3O43151 1660 aa19.56■□□□□ 0.72
SSH2-205ENST00000577483 SYNMO15061 1565 aa19.56■□□□□ 0.72
SSH2-205ENST00000577483 KANK1Q14678 1352 aa19.55■□□□□ 0.72
SSH2-205ENST00000577483 KDM5AP29375 1690 aaKnown RBP19.54■□□□□ 0.72
SSH2-205ENST00000577483 MYO5BQ9ULV0 1848 aa19.53■□□□□ 0.72
SSH2-205ENST00000577483 ZNF335Q9H4Z2 1342 aaPredicted RBP19.52■□□□□ 0.71
SSH2-205ENST00000577483 ROCK1Q13464 1354 aa19.51■□□□□ 0.71
SSH2-205ENST00000577483 E9PCH4 1651 aa19.51■□□□□ 0.71
SSH2-205ENST00000577483 IQGAP3Q86VI3 1631 aa19.51■□□□□ 0.71
SSH2-205ENST00000577483 MED14O60244 1454 aa19.51■□□□□ 0.71
SSH2-205ENST00000577483 THEMISQ8N1K5 641 aaPredicted RBP19.5■□□□□ 0.71
SSH2-205ENST00000577483 STRCP1A6NGW2 1772 aa19.49■□□□□ 0.71
SSH2-205ENST00000577483 IQSEC2Q5JU85 1478 aa19.49■□□□□ 0.71
SSH2-205ENST00000577483 SLIT1O75093 1534 aa19.48■□□□□ 0.71
SSH2-205ENST00000577483 RRBP1Q9P2E9 1410 aaKnown RBP19.48■□□□□ 0.71
SSH2-205ENST00000577483 NOS1P29475 1434 aa19.47■□□□□ 0.71
SSH2-205ENST00000577483 ARHGAP23Q9P227 1491 aa19.47■□□□□ 0.71
SSH2-205ENST00000577483 NPHP4O75161 1426 aaPredicted RBP19.46■□□□□ 0.71
SSH2-205ENST00000577483 ITGAEP38570 1179 aa19.46■□□□□ 0.71
SSH2-205ENST00000577483 ANKLE2Q86XL3 938 aa19.46■□□□□ 0.71
SSH2-205ENST00000577483 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
SSH2-205ENST00000577483 ADGRB3O60242 1522 aa19.44■□□□□ 0.7
SSH2-205ENST00000577483 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
SSH2-205ENST00000577483 CPS1P31327 1500 aa19.41■□□□□ 0.7
SSH2-205ENST00000577483 TMEM131LA2VDJ0 1609 aa19.39■□□□□ 0.69
SSH2-205ENST00000577483 IDI1Q13907 227 aa19.39■□□□□ 0.69
SSH2-205ENST00000577483 SPHKAPQ2M3C7 1700 aa19.38■□□□□ 0.69
SSH2-205ENST00000577483 LTKP29376 864 aa19.37■□□□□ 0.69
SSH2-205ENST00000577483 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
SSH2-205ENST00000577483 TMEM2Q9UHN6 1383 aa19.37■□□□□ 0.69
SSH2-205ENST00000577483 NUP155O75694 1391 aa19.33■□□□□ 0.69
SSH2-205ENST00000577483 NAIPQ13075 1403 aa19.33■□□□□ 0.68
SSH2-205ENST00000577483 TXNDC2Q86VQ3 553 aa19.33■□□□□ 0.68
SSH2-205ENST00000577483 STAG3Q9UJ98 1225 aa19.32■□□□□ 0.68
SSH2-205ENST00000577483 ALKQ9UM73 1620 aa19.31■□□□□ 0.68
SSH2-205ENST00000577483 SLC52A1Q9NWF4 448 aa19.3■□□□□ 0.68
SSH2-205ENST00000577483 LRRC7Q96NW7 1537 aa19.29■□□□□ 0.68
SSH2-205ENST00000577483 ZFYVE9O95405 1425 aa19.29■□□□□ 0.68
SSH2-205ENST00000577483 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
SSH2-205ENST00000577483 HFM1A2PYH4 1435 aa19.27■□□□□ 0.68
SSH2-205ENST00000577483 UBAP1LF5GYI3 381 aa19.26■□□□□ 0.67
SSH2-205ENST00000577483 CHD2O14647 1828 aaKnown RBP19.25■□□□□ 0.67
SSH2-205ENST00000577483 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms