RNA–Protein interactions for RNA: ENST00000577249.1

CDC6-203, Transcript of cell division cycle 6, humanhuman

TSL 4

Gene CDC6, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-203ENST00000577249 PPP6R1Q9UPN7 881 aa28.38■■■□□ 2.13
CDC6-203ENST00000577249 ABCC5O15440 1437 aa28.37■■■□□ 2.13
CDC6-203ENST00000577249 SHANK2Q9UPX8 1470 aa28.36■■■□□ 2.13
CDC6-203ENST00000577249 DAPK1P53355 1430 aa28.35■■■□□ 2.13
CDC6-203ENST00000577249 FAM50AQ14320 339 aaKnown RBP28.35■■■□□ 2.13
CDC6-203ENST00000577249 KIF3BO15066 747 aa28.34■■■□□ 2.13
CDC6-203ENST00000577249 PTPRKQ15262 1439 aa28.34■■■□□ 2.13
CDC6-203ENST00000577249 DNMT1P26358 1616 aaKnown RBP28.33■■■□□ 2.13
CDC6-203ENST00000577249 PPARGC1BQ86YN6 1023 aaKnown RBP28.32■■■□□ 2.12
CDC6-203ENST00000577249 ZNF142P52746 1687 aaPredicted RBP28.32■■■□□ 2.12
CDC6-203ENST00000577249 CEP170BQ9Y4F5 1589 aaPredicted RBP28.31■■■□□ 2.12
CDC6-203ENST00000577249 CROCC2H7BZ55 1655 aa28.29■■■□□ 2.12
CDC6-203ENST00000577249 NCKAP5LQ9HCH0 1330 aa28.28■■■□□ 2.12
CDC6-203ENST00000577249 LTBP4Q8N2S1 1624 aa28.25■■■□□ 2.11
CDC6-203ENST00000577249 KIF15Q9NS87 1388 aa28.25■■■□□ 2.11
CDC6-203ENST00000577249 DUOX2Q9NRD8 1548 aa28.25■■■□□ 2.11
CDC6-203ENST00000577249 ANKRD30AQ9BXX3 1397 aa28.24■■■□□ 2.11
CDC6-203ENST00000577249 RRP7BPQ9NSQ0 103 aa28.24■■■□□ 2.11
CDC6-203ENST00000577249 CHIC2Q9UKJ5 165 aa28.23■■■□□ 2.11
CDC6-203ENST00000577249 KDM5DQ9BY66 1539 aa28.21■■■□□ 2.11
CDC6-203ENST00000577249 FAM135AQ9P2D6 1515 aa28.21■■■□□ 2.11
CDC6-203ENST00000577249 PLA2R1Q13018 1463 aa28.21■■■□□ 2.11
CDC6-203ENST00000577249 EIF2AK4Q9P2K8 1649 aaKnown RBP28.2■■■□□ 2.1
CDC6-203ENST00000577249 WASHC2CQ9Y4E1 1318 aa28.19■■■□□ 2.1
CDC6-203ENST00000577249 ERBINQ96RT1 1412 aa28.18■■■□□ 2.1
CDC6-203ENST00000577249 A2ML1A8K2U0 1454 aa28.17■■■□□ 2.1
CDC6-203ENST00000577249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.17■■■□□ 2.1
CDC6-203ENST00000577249 PKD2Q13563 968 aa28.17■■■□□ 2.1
CDC6-203ENST00000577249 ZNF335Q9H4Z2 1342 aaPredicted RBP28.16■■■□□ 2.1
CDC6-203ENST00000577249 ADGRL2O95490 1459 aa28.15■■■□□ 2.1
CDC6-203ENST00000577249 TNRQ92752 1358 aa28.15■■■□□ 2.1
CDC6-203ENST00000577249 FBXO31Q5XUX0 539 aaPredicted RBP28.15■■■□□ 2.1
CDC6-203ENST00000577249 RNF17Q9BXT8 1623 aaKnown RBP28.14■■■□□ 2.1
CDC6-203ENST00000577249 PZPP20742 1482 aa28.14■■■□□ 2.09
CDC6-203ENST00000577249 IQSEC2Q5JU85 1478 aa28.12■■■□□ 2.09
CDC6-203ENST00000577249 POLR1AO95602 1720 aaPredicted RBP28.08■■■□□ 2.09
CDC6-203ENST00000577249 RRBP1Q9P2E9 1410 aaKnown RBP28.07■■■□□ 2.08
CDC6-203ENST00000577249 ROCK1Q13464 1354 aa28.06■■■□□ 2.08
CDC6-203ENST00000577249 ITGAEP38570 1179 aa28.05■■■□□ 2.08
CDC6-203ENST00000577249 ZC3H13Q5T200 1668 aaKnown RBP28.04■■■□□ 2.08
CDC6-203ENST00000577249 DISP3Q9P2K9 1392 aa28.04■■■□□ 2.08
CDC6-203ENST00000577249 ABCC3O15438 1527 aa28.03■■■□□ 2.08
CDC6-203ENST00000577249 KANK1Q14678 1352 aa28.03■■■□□ 2.08
CDC6-203ENST00000577249 ANKRD50Q9ULJ7 1429 aa28.02■■■□□ 2.08
CDC6-203ENST00000577249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.02■■■□□ 2.087e-9■■■□□ 18.4
CDC6-203ENST00000577249 MROH1Q8NDA8 1641 aa28.02■■■□□ 2.08
CDC6-203ENST00000577249 PRDM15P57071 1507 aaPredicted RBP28.01■■■□□ 2.07
CDC6-203ENST00000577249 NEURL4Q96JN8 1562 aa28■■■□□ 2.07
CDC6-203ENST00000577249 UBAP1LF5GYI3 381 aa28■■■□□ 2.07
CDC6-203ENST00000577249 NLRP1Q9C000 1473 aa27.99■■■□□ 2.07
CDC6-203ENST00000577249 UGGT1Q9NYU2 1555 aa27.99■■■□□ 2.07
CDC6-203ENST00000577249 DEPDC5O75140 1603 aa27.98■■■□□ 2.07
CDC6-203ENST00000577249 CEP152O94986 1710 aa27.98■■■□□ 2.07
CDC6-203ENST00000577249 SPATA31D1Q6ZQQ2 1576 aa27.95■■■□□ 2.07
CDC6-203ENST00000577249 THEMISQ8N1K5 641 aaPredicted RBP27.95■■■□□ 2.06
CDC6-203ENST00000577249 ANKLE2Q86XL3 938 aa27.94■■■□□ 2.06
CDC6-203ENST00000577249 CFAP65Q6ZU64 1925 aaKnown RBP27.92■■■□□ 2.06
CDC6-203ENST00000577249 ARHGAP31Q2M1Z3 1444 aa27.91■■■□□ 2.06
CDC6-203ENST00000577249 ERVK-7P63135 1459 aa27.9■■■□□ 2.06
CDC6-203ENST00000577249 LMTK2Q8IWU2 1503 aa27.87■■■□□ 2.05
CDC6-203ENST00000577249 VWDEQ8N2E2 1590 aa27.87■■■□□ 2.05
CDC6-203ENST00000577249 NPHP4O75161 1426 aaPredicted RBP27.87■■■□□ 2.05
CDC6-203ENST00000577249 SCAF1Q9H7N4 1312 aaKnown RBP27.87■■■□□ 2.05
CDC6-203ENST00000577249 CPS1P31327 1500 aa27.87■■■□□ 2.05
CDC6-203ENST00000577249 IQGAP1P46940 1657 aa27.85■■■□□ 2.05
CDC6-203ENST00000577249 ILDR2Q71H61 639 aa27.84■■■□□ 2.05
CDC6-203ENST00000577249 MED14O60244 1454 aa27.82■■■□□ 2.04
CDC6-203ENST00000577249 PIP4K2BP78356 416 aa27.8■■■□□ 2.04
CDC6-203ENST00000577249 UNC13BO14795 1591 aa27.8■■■□□ 2.04
CDC6-203ENST00000577249 UBR1Q8IWV7 1749 aa27.8■■■□□ 2.04
CDC6-203ENST00000577249 EFCAB6Q5THR3 1501 aa27.77■■■□□ 2.04
CDC6-203ENST00000577249 NUP155O75694 1391 aa27.75■■■□□ 2.03
CDC6-203ENST00000577249 NAIPQ13075 1403 aa27.75■■■□□ 2.03
CDC6-203ENST00000577249 TOM1O60784 492 aa27.74■■■□□ 2.03
CDC6-203ENST00000577249 RPRD2Q5VT52 1461 aaKnown RBP27.74■■■□□ 2.03
CDC6-203ENST00000577249 TET3O43151 1660 aa27.72■■■□□ 2.03
CDC6-203ENST00000577249 HFM1A2PYH4 1435 aa27.72■■■□□ 2.03
CDC6-203ENST00000577249 STRCP1A6NGW2 1772 aa27.71■■■□□ 2.03
CDC6-203ENST00000577249 SCAF11Q99590 1463 aaKnown RBP27.7■■■□□ 2.03
CDC6-203ENST00000577249 IQGAP3Q86VI3 1631 aa27.7■■■□□ 2.02
CDC6-203ENST00000577249 HSPA1LP34931 641 aa27.69■■■□□ 2.02
CDC6-203ENST00000577249 PIK3C2BO00750 1634 aa27.69■■■□□ 2.02
CDC6-203ENST00000577249 GCC2Q8IWJ2 1684 aa27.68■■■□□ 2.02
CDC6-203ENST00000577249 NOS1P29475 1434 aa27.68■■■□□ 2.02
CDC6-203ENST00000577249 SLC52A1Q9NWF4 448 aa27.67■■■□□ 2.02
CDC6-203ENST00000577249 TXNDC2Q86VQ3 553 aa27.66■■■□□ 2.02
CDC6-203ENST00000577249 STAG3Q9UJ98 1225 aa27.66■■■□□ 2.02
CDC6-203ENST00000577249 SYNMO15061 1565 aa27.65■■■□□ 2.02
CDC6-203ENST00000577249 SLIT1O75093 1534 aa27.65■■■□□ 2.02
CDC6-203ENST00000577249 ARHGAP23Q9P227 1491 aa27.64■■■□□ 2.02
CDC6-203ENST00000577249 SOCS7O14512 581 aa27.64■■■□□ 2.02
CDC6-203ENST00000577249 LTKP29376 864 aa27.64■■■□□ 2.02
CDC6-203ENST00000577249 LRRC7Q96NW7 1537 aa27.63■■■□□ 2.01
CDC6-203ENST00000577249 IDI1Q13907 227 aa27.63■■■□□ 2.01
CDC6-203ENST00000577249 SENP3Q9H4L4 574 aaPredicted RBP27.62■■■□□ 2.01
CDC6-203ENST00000577249 EID1Q9Y6B2 187 aa27.62■■■□□ 2.01
CDC6-203ENST00000577249 ALKQ9UM73 1620 aa27.6■■■□□ 2.01
CDC6-203ENST00000577249 TRIM52Q96A61 297 aa27.59■■■□□ 2.01
CDC6-203ENST00000577249 E9PCH4 1651 aa27.58■■■□□ 2.01
CDC6-203ENST00000577249 TMEM2Q9UHN6 1383 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms