RNA–Protein interactions for RNA: ENST00000577249.1

CDC6-203, Transcript of cell division cycle 6, humanhuman

TSL 4

Gene CDC6, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-203ENST00000577249 NISCHQ9Y2I1 1504 aa44.69■■■■■ 4.74
CDC6-203ENST00000577249 ABCC9O60706 1549 aa40.05■■■■■ 4
CDC6-203ENST00000577249 CCDC180Q9P1Z9 1646 aa39.98■■■■□ 3.99
CDC6-203ENST00000577249 RB1CC1Q8TDY2 1594 aa38.07■■■■□ 3.69
CDC6-203ENST00000577249 NACADO15069 1562 aa37.77■■■■□ 3.64
CDC6-203ENST00000577249 DCAF8L2P0C7V8 631 aa37.72■■■■□ 3.63
CDC6-203ENST00000577249 DNAJC5BQ9UF47 199 aa37.45■■■■□ 3.59
CDC6-203ENST00000577249 PABPN1Q86U42 306 aaKnown RBP eCLIP37.27■■■■□ 3.56
CDC6-203ENST00000577249 UNC13AQ9UPW8 1703 aa37.24■■■■□ 3.55
CDC6-203ENST00000577249 MYO15BQ96JP2 1530 aa37.2■■■■□ 3.55
CDC6-203ENST00000577249 ZCCHC6Q5VYS8 1495 aaKnown RBP37.2■■■■□ 3.54
CDC6-203ENST00000577249 DCAF1Q9Y4B6 1507 aa37■■■■□ 3.51
CDC6-203ENST00000577249 BICRAQ9NZM4 1560 aa36.93■■■■□ 3.5
CDC6-203ENST00000577249 SCRIBQ14160 1630 aa36.53■■■■□ 3.44
CDC6-203ENST00000577249 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
CDC6-203ENST00000577249 CC2D2AQ9P2K1 1620 aa36.15■■■■□ 3.38
CDC6-203ENST00000577249 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
CDC6-203ENST00000577249 CECR2Q9BXF3 1484 aa36.04■■■■□ 3.36
CDC6-203ENST00000577249 NCAPD3P42695 1498 aa34.83■■■■□ 3.17
CDC6-203ENST00000577249 SMARCA4P51532 1647 aa34.78■■■■□ 3.16
CDC6-203ENST00000577249 ATAD2BQ9ULI0 1458 aa34.77■■■■□ 3.16
CDC6-203ENST00000577249 SMARCA2P51531 1590 aa34.7■■■■□ 3.14
CDC6-203ENST00000577249 BAZ1AQ9NRL2 1556 aaPredicted RBP34.67■■■■□ 3.14
CDC6-203ENST00000577249 HMGXB3Q12766 1538 aa34.61■■■■□ 3.13
CDC6-203ENST00000577249 ERCC6Q03468 1493 aa34.59■■■■□ 3.13
CDC6-203ENST00000577249 BAZ1BQ9UIG0 1483 aaKnown RBP34.49■■■■□ 3.11
CDC6-203ENST00000577249 CUX2O14529 1486 aa34.42■■■■□ 3.1
CDC6-203ENST00000577249 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
CDC6-203ENST00000577249 NESP48681 1621 aa34.38■■■■□ 3.09
CDC6-203ENST00000577249 DNAJC5Q9H3Z4 198 aa34.36■■■■□ 3.09
CDC6-203ENST00000577249 PEG3Q9GZU2 1588 aa34.36■■■■□ 3.09
CDC6-203ENST00000577249 LAMC3Q9Y6N6 1575 aa34.1■■■■□ 3.05
CDC6-203ENST00000577249 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
CDC6-203ENST00000577249 RSF1Q96T23 1441 aaPredicted RBP34.02■■■■□ 3.04
CDC6-203ENST00000577249 WIZO95785 1651 aa34.02■■■■□ 3.04
CDC6-203ENST00000577249 KIF21AQ7Z4S6 1674 aa33.98■■■■□ 3.03
CDC6-203ENST00000577249 PDS5BQ9NTI5 1447 aa33.9■■■■□ 3.02
CDC6-203ENST00000577249 CADPSQ9ULU8 1353 aa33.8■■■■□ 3
CDC6-203ENST00000577249 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
CDC6-203ENST00000577249 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
CDC6-203ENST00000577249 WDR62O43379 1518 aa33.53■■■□□ 2.96
CDC6-203ENST00000577249 CEP164Q9UPV0 1460 aa33.52■■■□□ 2.96
CDC6-203ENST00000577249 FANCD2Q9BXW9 1451 aa33.47■■■□□ 2.95
CDC6-203ENST00000577249 CFTRP13569 1480 aa33.41■■■□□ 2.94
CDC6-203ENST00000577249 CCDC88BA6NC98 1476 aa33.31■■■□□ 2.92
CDC6-203ENST00000577249 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
CDC6-203ENST00000577249 PRDM2Q13029 1718 aa33.17■■■□□ 2.9
CDC6-203ENST00000577249 SUPT5HO00267 1087 aaKnown RBP33.14■■■□□ 2.9
CDC6-203ENST00000577249 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
CDC6-203ENST00000577249 OSCARQ8IYS5 282 aa32.86■■■□□ 2.85
CDC6-203ENST00000577249 TOPBP1Q92547 1522 aa32.83■■■□□ 2.85
CDC6-203ENST00000577249 IFT140Q96RY7 1462 aa32.81■■■□□ 2.84
CDC6-203ENST00000577249 ZNF608Q9ULD9 1512 aaPredicted RBP32.8■■■□□ 2.84
CDC6-203ENST00000577249 DNMBPQ6XZF7 1577 aa32.73■■■□□ 2.83
CDC6-203ENST00000577249 ABCC8Q09428 1581 aa32.71■■■□□ 2.83
CDC6-203ENST00000577249 EIF4G3O43432 1585 aaKnown RBP32.65■■■□□ 2.82
CDC6-203ENST00000577249 TARBP1Q13395 1621 aaKnown RBP32.52■■■□□ 2.8
CDC6-203ENST00000577249 RIMBP3CA6NJZ7 1639 aa32.5■■■□□ 2.79
CDC6-203ENST00000577249 RIMBP3BA6NNM3 1639 aa32.5■■■□□ 2.79
CDC6-203ENST00000577249 RIMBP3Q9UFD9 1639 aa32.5■■■□□ 2.79
CDC6-203ENST00000577249 AQRO60306 1485 aaKnown RBP eCLIP32.49■■■□□ 2.79
CDC6-203ENST00000577249 POLA1P09884 1462 aaPredicted RBP32.49■■■□□ 2.79
CDC6-203ENST00000577249 CHD1O14646 1710 aa32.43■■■□□ 2.78
CDC6-203ENST00000577249 RAD54L2Q9Y4B4 1467 aa32.41■■■□□ 2.78
CDC6-203ENST00000577249 ARHGEF11O15085 1522 aa32.38■■■□□ 2.77
CDC6-203ENST00000577249 FBLN2P98095 1184 aa32.35■■■□□ 2.77
CDC6-203ENST00000577249 SOGA1O94964 1423 aa32.34■■■□□ 2.77
CDC6-203ENST00000577249 FGD5Q6ZNL6 1462 aa32.32■■■□□ 2.76
CDC6-203ENST00000577249 TDRD9Q8NDG6 1382 aaKnown RBP32.3■■■□□ 2.76
CDC6-203ENST00000577249 CUX1P39880 1505 aa32.28■■■□□ 2.76
CDC6-203ENST00000577249 SNAPC4Q5SXM2 1469 aa32.19■■■□□ 2.74
CDC6-203ENST00000577249 WDR97A6NE52 1622 aa32.16■■■□□ 2.74
CDC6-203ENST00000577249 CYB5RLQ6IPT4 315 aa32.15■■■□□ 2.74
CDC6-203ENST00000577249 WRNQ14191 1432 aaPredicted RBP eCLIP32.11■■■□□ 2.73
CDC6-203ENST00000577249 GRIN2BQ13224 1484 aa32.06■■■□□ 2.72
CDC6-203ENST00000577249 ARAP1Q96P48 1450 aa32.05■■■□□ 2.72
CDC6-203ENST00000577249 MAGI1Q96QZ7 1491 aaPredicted RBP32.05■■■□□ 2.72
CDC6-203ENST00000577249 CHMP7Q8WUX9 453 aaPredicted RBP32.05■■■□□ 2.72
CDC6-203ENST00000577249 PBRM1Q86U86 1689 aa32.01■■■□□ 2.71
CDC6-203ENST00000577249 TOP2BQ02880 1626 aa32■■■□□ 2.71
CDC6-203ENST00000577249 SYNJ1O43426 1573 aa32■■■□□ 2.71
CDC6-203ENST00000577249 BIVM-ERCC5R4GMW8 1640 aa31.98■■■□□ 2.71
CDC6-203ENST00000577249 CLASP1Q7Z460 1538 aa31.97■■■□□ 2.71
CDC6-203ENST00000577249 GAPVD1Q14C86 1478 aa31.97■■■□□ 2.71
CDC6-203ENST00000577249 SYNJ2O15056 1496 aa31.96■■■□□ 2.71
CDC6-203ENST00000577249 ABCA10Q8WWZ4 1543 aa31.92■■■□□ 2.7
CDC6-203ENST00000577249 ABCA5Q8WWZ7 1642 aa31.89■■■□□ 2.7
CDC6-203ENST00000577249 TRHP20396 242 aaPredicted RBP31.85■■■□□ 2.69
CDC6-203ENST00000577249 ADAMTS12P58397 1594 aa31.68■■■□□ 2.66
CDC6-203ENST00000577249 GRIN2AQ12879 1464 aa31.66■■■□□ 2.66
CDC6-203ENST00000577249 CEP170Q5SW79 1584 aa31.56■■■□□ 2.64
CDC6-203ENST00000577249 ERICH3Q5RHP9 1530 aa31.54■■■□□ 2.64
CDC6-203ENST00000577249 FHAD1B1AJZ9 1412 aa31.53■■■□□ 2.64
CDC6-203ENST00000577249 ERCC6L2Q5T890 1561 aa31.52■■■□□ 2.64
CDC6-203ENST00000577249 NUP160Q12769 1436 aa31.51■■■□□ 2.64
CDC6-203ENST00000577249 KIF27Q86VH2 1401 aa31.48■■■□□ 2.63
CDC6-203ENST00000577249 SHROOM2Q13796 1616 aa31.39■■■□□ 2.62
CDC6-203ENST00000577249 IGF1RP08069 1367 aa31.32■■■□□ 2.6
CDC6-203ENST00000577249 PRG4Q92954 1404 aaPredicted RBP31.25■■■□□ 2.59
CDC6-203ENST00000577249 RUSC2Q8N2Y8 1516 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms