RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 PLA2R1Q13018 1463 aa19.23■□□□□ 0.67
PRPF8-215ENST00000576958 KDM5DQ9BY66 1539 aa19.22■□□□□ 0.67
PRPF8-215ENST00000576958 ARHGEF5Q12774 1597 aa19.22■□□□□ 0.67
PRPF8-215ENST00000576958 NEURL4Q96JN8 1562 aa19.22■□□□□ 0.67
PRPF8-215ENST00000576958 TNRQ92752 1358 aa19.2■□□□□ 0.66
PRPF8-215ENST00000576958 DISP3Q9P2K9 1392 aa19.2■□□□□ 0.66
PRPF8-215ENST00000576958 PZPP20742 1482 aa19.2■□□□□ 0.66
PRPF8-215ENST00000576958 WASHC2CQ9Y4E1 1318 aa19.18■□□□□ 0.66
PRPF8-215ENST00000576958 PKD2Q13563 968 aa19.17■□□□□ 0.66
PRPF8-215ENST00000576958 PPP6R1Q9UPN7 881 aa19.17■□□□□ 0.66
PRPF8-215ENST00000576958 POLR1AO95602 1720 aaPredicted RBP19.17■□□□□ 0.66
PRPF8-215ENST00000576958 MROH1Q8NDA8 1641 aa19.16■□□□□ 0.66
PRPF8-215ENST00000576958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.16■□□□□ 0.66
PRPF8-215ENST00000576958 IQSEC2Q5JU85 1478 aa19.15■□□□□ 0.66
PRPF8-215ENST00000576958 ABCC3O15438 1527 aa19.15■□□□□ 0.66
PRPF8-215ENST00000576958 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
PRPF8-215ENST00000576958 RNF17Q9BXT8 1623 aaKnown RBP19.14■□□□□ 0.66
PRPF8-215ENST00000576958 SPATA31D1Q6ZQQ2 1576 aa19.14■□□□□ 0.65
PRPF8-215ENST00000576958 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
PRPF8-215ENST00000576958 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
PRPF8-215ENST00000576958 CEP152O94986 1710 aa19.13■□□□□ 0.65
PRPF8-215ENST00000576958 MIA2Q96PC5 1412 aa19.12■□□□□ 0.65
PRPF8-215ENST00000576958 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
PRPF8-215ENST00000576958 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
PRPF8-215ENST00000576958 CFAP65Q6ZU64 1925 aaKnown RBP19.1■□□□□ 0.65
PRPF8-215ENST00000576958 RSPH4AQ5TD94 716 aa19.1■□□□□ 0.65
PRPF8-215ENST00000576958 VWDEQ8N2E2 1590 aa19.09■□□□□ 0.65
PRPF8-215ENST00000576958 UGGT1Q9NYU2 1555 aa19.09■□□□□ 0.65
PRPF8-215ENST00000576958 MAP3K1Q13233 1512 aa19.08■□□□□ 0.64
PRPF8-215ENST00000576958 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.64
PRPF8-215ENST00000576958 ERVK-7P63135 1459 aa19.07■□□□□ 0.64
PRPF8-215ENST00000576958 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
PRPF8-215ENST00000576958 EIF2AK4Q9P2K8 1649 aaKnown RBP19.06■□□□□ 0.64
PRPF8-215ENST00000576958 ABCC5O15440 1437 aa19.06■□□□□ 0.64
PRPF8-215ENST00000576958 CROCC2H7BZ55 1655 aa19.05■□□□□ 0.64
PRPF8-215ENST00000576958 SHANK2Q9UPX8 1470 aa19.05■□□□□ 0.64
PRPF8-215ENST00000576958 ALKQ9UM73 1620 aa19.05■□□□□ 0.64
PRPF8-215ENST00000576958 NLRP1Q9C000 1473 aa19.04■□□□□ 0.64
PRPF8-215ENST00000576958 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
PRPF8-215ENST00000576958 ZC3H13Q5T200 1668 aaKnown RBP19.04■□□□□ 0.64
PRPF8-215ENST00000576958 PTPN23Q9H3S7 1636 aa19.03■□□□□ 0.64
PRPF8-215ENST00000576958 PIP4K2BP78356 416 aa19.03■□□□□ 0.64
PRPF8-215ENST00000576958 RRP7BPQ9NSQ0 103 aa19.03■□□□□ 0.64
PRPF8-215ENST00000576958 ANKLE2Q86XL3 938 aa19.02■□□□□ 0.64
PRPF8-215ENST00000576958 IQGAP1P46940 1657 aa19.01■□□□□ 0.63
PRPF8-215ENST00000576958 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
PRPF8-215ENST00000576958 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
PRPF8-215ENST00000576958 KIF15Q9NS87 1388 aa19.01■□□□□ 0.63
PRPF8-215ENST00000576958 DEPDC5O75140 1603 aa19■□□□□ 0.63
PRPF8-215ENST00000576958 UBR1Q8IWV7 1749 aa19■□□□□ 0.63
PRPF8-215ENST00000576958 HSPA1LP34931 641 aa19■□□□□ 0.63
PRPF8-215ENST00000576958 THEMISQ8N1K5 641 aaPredicted RBP19■□□□□ 0.63
PRPF8-215ENST00000576958 MED14O60244 1454 aa19■□□□□ 0.63
PRPF8-215ENST00000576958 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
PRPF8-215ENST00000576958 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
PRPF8-215ENST00000576958 CPS1P31327 1500 aa18.99■□□□□ 0.63
PRPF8-215ENST00000576958 DAPK1P53355 1430 aa18.99■□□□□ 0.63
PRPF8-215ENST00000576958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.98■□□□□ 0.632e-9■□□□□ 9.8
PRPF8-215ENST00000576958 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
PRPF8-215ENST00000576958 FGD6Q6ZV73 1430 aa18.96■□□□□ 0.63
PRPF8-215ENST00000576958 SOCS7O14512 581 aa18.95■□□□□ 0.62
PRPF8-215ENST00000576958 LTKP29376 864 aa18.95■□□□□ 0.62
PRPF8-215ENST00000576958 PIK3C2BO00750 1634 aa18.93■□□□□ 0.62
PRPF8-215ENST00000576958 LRRC7Q96NW7 1537 aa18.93■□□□□ 0.62
PRPF8-215ENST00000576958 ERBINQ96RT1 1412 aa18.92■□□□□ 0.62
PRPF8-215ENST00000576958 ARHGAP23Q9P227 1491 aa18.9■□□□□ 0.62
PRPF8-215ENST00000576958 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
PRPF8-215ENST00000576958 SYNMO15061 1565 aa18.89■□□□□ 0.62
PRPF8-215ENST00000576958 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.62
PRPF8-215ENST00000576958 ARHGAP31Q2M1Z3 1444 aa18.89■□□□□ 0.61
PRPF8-215ENST00000576958 XIRP1Q702N8 1843 aaKnown RBP18.88■□□□□ 0.61
PRPF8-215ENST00000576958 TOM1O60784 492 aa18.87■□□□□ 0.61
PRPF8-215ENST00000576958 SLIT1O75093 1534 aa18.87■□□□□ 0.61
PRPF8-215ENST00000576958 APLP2Q06481 763 aa18.87■□□□□ 0.61
PRPF8-215ENST00000576958 TXNDC2Q86VQ3 553 aa18.86■□□□□ 0.61
PRPF8-215ENST00000576958 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
PRPF8-215ENST00000576958 IDI1Q13907 227 aa18.83■□□□□ 0.6
PRPF8-215ENST00000576958 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.6
PRPF8-215ENST00000576958 LMTK2Q8IWU2 1503 aa18.83■□□□□ 0.6
PRPF8-215ENST00000576958 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
PRPF8-215ENST00000576958 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
PRPF8-215ENST00000576958 EFCAB6Q5THR3 1501 aa18.81■□□□□ 0.6
PRPF8-215ENST00000576958 ADGRL2O95490 1459 aa18.8■□□□□ 0.6
PRPF8-215ENST00000576958 NOS1P29475 1434 aa18.79■□□□□ 0.6
PRPF8-215ENST00000576958 KANK1Q14678 1352 aa18.79■□□□□ 0.6
PRPF8-215ENST00000576958 SLC26A8Q96RN1 970 aa18.78■□□□□ 0.6
PRPF8-215ENST00000576958 MYO5BQ9ULV0 1848 aa18.78■□□□□ 0.6
PRPF8-215ENST00000576958 PPARGC1BQ86YN6 1023 aaKnown RBP18.77■□□□□ 0.6
PRPF8-215ENST00000576958 TET3O43151 1660 aa18.76■□□□□ 0.59
PRPF8-215ENST00000576958 ADGRB3O60242 1522 aa18.76■□□□□ 0.59
PRPF8-215ENST00000576958 STAG3Q9UJ98 1225 aa18.76■□□□□ 0.59
PRPF8-215ENST00000576958 EID1Q9Y6B2 187 aa18.74■□□□□ 0.59
PRPF8-215ENST00000576958 ANKRD50Q9ULJ7 1429 aa18.74■□□□□ 0.59
PRPF8-215ENST00000576958 TMEM94Q12767 1356 aa18.72■□□□□ 0.59
PRPF8-215ENST00000576958 KDM5AP29375 1690 aaKnown RBP18.72■□□□□ 0.59
PRPF8-215ENST00000576958 GCC2Q8IWJ2 1684 aa18.72■□□□□ 0.59
PRPF8-215ENST00000576958 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
PRPF8-215ENST00000576958 UNC13BO14795 1591 aa18.68■□□□□ 0.58
PRPF8-215ENST00000576958 ZFYVE9O95405 1425 aa18.68■□□□□ 0.58
PRPF8-215ENST00000576958 E9PCH4 1651 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms