RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
PRPF8-215ENST00000576958 ABCC9O60706 1549 aa27.51■■□□□ 1.99
PRPF8-215ENST00000576958 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
PRPF8-215ENST00000576958 RB1CC1Q8TDY2 1594 aa25.98■■□□□ 1.75
PRPF8-215ENST00000576958 DNAJC5BQ9UF47 199 aa25.93■■□□□ 1.74
PRPF8-215ENST00000576958 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
PRPF8-215ENST00000576958 NACADO15069 1562 aa25.77■■□□□ 1.72
PRPF8-215ENST00000576958 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.7
PRPF8-215ENST00000576958 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
PRPF8-215ENST00000576958 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.65
PRPF8-215ENST00000576958 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
PRPF8-215ENST00000576958 ZCCHC6Q5VYS8 1495 aaKnown RBP25.24■■□□□ 1.63
PRPF8-215ENST00000576958 DCAF1Q9Y4B6 1507 aa25.03■■□□□ 1.6
PRPF8-215ENST00000576958 SCRIBQ14160 1630 aa25.03■■□□□ 1.6
PRPF8-215ENST00000576958 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
PRPF8-215ENST00000576958 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
PRPF8-215ENST00000576958 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
PRPF8-215ENST00000576958 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
PRPF8-215ENST00000576958 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
PRPF8-215ENST00000576958 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
PRPF8-215ENST00000576958 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
PRPF8-215ENST00000576958 NESP48681 1621 aa23.66■■□□□ 1.38
PRPF8-215ENST00000576958 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.37
PRPF8-215ENST00000576958 SMARCA2P51531 1590 aa23.64■■□□□ 1.37
PRPF8-215ENST00000576958 HMGXB3Q12766 1538 aa23.64■■□□□ 1.37
PRPF8-215ENST00000576958 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
PRPF8-215ENST00000576958 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.37
PRPF8-215ENST00000576958 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
PRPF8-215ENST00000576958 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
PRPF8-215ENST00000576958 CUX2O14529 1486 aa23.54■■□□□ 1.36
PRPF8-215ENST00000576958 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
PRPF8-215ENST00000576958 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
PRPF8-215ENST00000576958 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
PRPF8-215ENST00000576958 WIZO95785 1651 aa23.3■■□□□ 1.32
PRPF8-215ENST00000576958 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
PRPF8-215ENST00000576958 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
PRPF8-215ENST00000576958 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
PRPF8-215ENST00000576958 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
PRPF8-215ENST00000576958 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
PRPF8-215ENST00000576958 WDR62O43379 1518 aa22.96■■□□□ 1.27
PRPF8-215ENST00000576958 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
PRPF8-215ENST00000576958 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.25
PRPF8-215ENST00000576958 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
PRPF8-215ENST00000576958 CFTRP13569 1480 aa22.85■■□□□ 1.25
PRPF8-215ENST00000576958 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
PRPF8-215ENST00000576958 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
PRPF8-215ENST00000576958 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
PRPF8-215ENST00000576958 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
PRPF8-215ENST00000576958 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
PRPF8-215ENST00000576958 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
PRPF8-215ENST00000576958 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
PRPF8-215ENST00000576958 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
PRPF8-215ENST00000576958 EIF4G3O43432 1585 aaKnown RBP22.36■■□□□ 1.17
PRPF8-215ENST00000576958 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
PRPF8-215ENST00000576958 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
PRPF8-215ENST00000576958 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
PRPF8-215ENST00000576958 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
PRPF8-215ENST00000576958 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.161e-9■■■□□ 15.8
PRPF8-215ENST00000576958 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
PRPF8-215ENST00000576958 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
PRPF8-215ENST00000576958 RAD54L2Q9Y4B4 1467 aa22.25■■□□□ 1.15
PRPF8-215ENST00000576958 CHD1O14646 1710 aa22.23■■□□□ 1.15
PRPF8-215ENST00000576958 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
PRPF8-215ENST00000576958 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
PRPF8-215ENST00000576958 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
PRPF8-215ENST00000576958 CUX1P39880 1505 aa22.13■■□□□ 1.13
PRPF8-215ENST00000576958 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
PRPF8-215ENST00000576958 FBLN2P98095 1184 aa22.12■■□□□ 1.13
PRPF8-215ENST00000576958 SOGA1O94964 1423 aa22.1■■□□□ 1.13
PRPF8-215ENST00000576958 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
PRPF8-215ENST00000576958 SNAPC4Q5SXM2 1469 aa22.04■■□□□ 1.12
PRPF8-215ENST00000576958 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
PRPF8-215ENST00000576958 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
PRPF8-215ENST00000576958 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
PRPF8-215ENST00000576958 CLASP1Q7Z460 1538 aa21.92■■□□□ 1.1
PRPF8-215ENST00000576958 GRIN2BQ13224 1484 aa21.89■■□□□ 1.09
PRPF8-215ENST00000576958 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
PRPF8-215ENST00000576958 MAGI1Q96QZ7 1491 aaPredicted RBP21.86■■□□□ 1.09
PRPF8-215ENST00000576958 CHMP7Q8WUX9 453 aaPredicted RBP21.86■■□□□ 1.09
PRPF8-215ENST00000576958 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.09
PRPF8-215ENST00000576958 SYNJ2O15056 1496 aa21.83■■□□□ 1.08
PRPF8-215ENST00000576958 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
PRPF8-215ENST00000576958 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
PRPF8-215ENST00000576958 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
PRPF8-215ENST00000576958 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
PRPF8-215ENST00000576958 ERCC6L2Q5T890 1561 aa21.73■■□□□ 1.07
PRPF8-215ENST00000576958 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
PRPF8-215ENST00000576958 TOP2BQ02880 1626 aa21.68■■□□□ 1.06
PRPF8-215ENST00000576958 ADAMTS12P58397 1594 aa21.66■■□□□ 1.06
PRPF8-215ENST00000576958 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
PRPF8-215ENST00000576958 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.06
PRPF8-215ENST00000576958 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
PRPF8-215ENST00000576958 NUP160Q12769 1436 aa21.56■■□□□ 1.04
PRPF8-215ENST00000576958 FHAD1B1AJZ9 1412 aa21.52■■□□□ 1.04
PRPF8-215ENST00000576958 SHROOM2Q13796 1616 aa21.49■■□□□ 1.03
PRPF8-215ENST00000576958 ERICH3Q5RHP9 1530 aa21.48■■□□□ 1.03
PRPF8-215ENST00000576958 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
PRPF8-215ENST00000576958 RUSC2Q8N2Y8 1516 aa21.37■■□□□ 1.01
PRPF8-215ENST00000576958 JPH4Q96JJ6 628 aa21.32■■□□□ 1
PRPF8-215ENST00000576958 KIF13AQ9H1H9 1805 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms