RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 TSPY10P0CW01 314 aa20.93■□□□□ 0.94
ATP2A3-215ENST00000576957 LRRC9Q6ZRR7 1453 aa20.92■□□□□ 0.94
ATP2A3-215ENST00000576957 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
ATP2A3-215ENST00000576957 KDM5DQ9BY66 1539 aa20.9■□□□□ 0.94
ATP2A3-215ENST00000576957 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
ATP2A3-215ENST00000576957 PZPP20742 1482 aa20.88■□□□□ 0.93
ATP2A3-215ENST00000576957 WASHC2CQ9Y4E1 1318 aa20.88■□□□□ 0.93
ATP2A3-215ENST00000576957 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
ATP2A3-215ENST00000576957 DNMT1P26358 1616 aaKnown RBP20.88■□□□□ 0.93
ATP2A3-215ENST00000576957 TNRQ92752 1358 aa20.87■□□□□ 0.93
ATP2A3-215ENST00000576957 ZNF335Q9H4Z2 1342 aaPredicted RBP20.86■□□□□ 0.93
ATP2A3-215ENST00000576957 FBXO31Q5XUX0 539 aaPredicted RBP20.85■□□□□ 0.93
ATP2A3-215ENST00000576957 MIA2Q96PC5 1412 aa20.84■□□□□ 0.93
ATP2A3-215ENST00000576957 MAST1Q9Y2H9 1570 aa20.84■□□□□ 0.93
ATP2A3-215ENST00000576957 KANK4Q5T7N3 995 aaPredicted RBP20.81■□□□□ 0.92
ATP2A3-215ENST00000576957 MYOM3Q5VTT5 1437 aa20.8■□□□□ 0.92
ATP2A3-215ENST00000576957 NLRP1Q9C000 1473 aa20.8■□□□□ 0.92
ATP2A3-215ENST00000576957 RNF17Q9BXT8 1623 aaKnown RBP20.79■□□□□ 0.92
ATP2A3-215ENST00000576957 THEMISQ8N1K5 641 aaPredicted RBP20.79■□□□□ 0.92
ATP2A3-215ENST00000576957 DISP3Q9P2K9 1392 aa20.78■□□□□ 0.92
ATP2A3-215ENST00000576957 POLR1AO95602 1720 aaPredicted RBP20.78■□□□□ 0.92
ATP2A3-215ENST00000576957 EIF2AK4Q9P2K8 1649 aaKnown RBP20.78■□□□□ 0.92
ATP2A3-215ENST00000576957 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.91
ATP2A3-215ENST00000576957 UBAP1LF5GYI3 381 aa20.76■□□□□ 0.91
ATP2A3-215ENST00000576957 ANKLE2Q86XL3 938 aa20.76■□□□□ 0.91
ATP2A3-215ENST00000576957 NEURL4Q96JN8 1562 aa20.75■□□□□ 0.91
ATP2A3-215ENST00000576957 UGGT1Q9NYU2 1555 aa20.75■□□□□ 0.91
ATP2A3-215ENST00000576957 ABCC3O15438 1527 aa20.74■□□□□ 0.91
ATP2A3-215ENST00000576957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.73■□□□□ 0.91
ATP2A3-215ENST00000576957 CPS1P31327 1500 aa20.72■□□□□ 0.91
ATP2A3-215ENST00000576957 DUOX2Q9NRD8 1548 aa20.72■□□□□ 0.91
ATP2A3-215ENST00000576957 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
ATP2A3-215ENST00000576957 MED14O60244 1454 aa20.71■□□□□ 0.91
ATP2A3-215ENST00000576957 DEPDC5O75140 1603 aa20.71■□□□□ 0.91
ATP2A3-215ENST00000576957 SHANK2Q9UPX8 1470 aa20.7■□□□□ 0.9
ATP2A3-215ENST00000576957 APLP2Q06481 763 aa20.7■□□□□ 0.9
ATP2A3-215ENST00000576957 MROH1Q8NDA8 1641 aa20.69■□□□□ 0.9
ATP2A3-215ENST00000576957 NPHP4O75161 1426 aaPredicted RBP20.68■□□□□ 0.9
ATP2A3-215ENST00000576957 ERVK-7P63135 1459 aa20.68■□□□□ 0.9
ATP2A3-215ENST00000576957 ILDR2Q71H61 639 aa20.66■□□□□ 0.9
ATP2A3-215ENST00000576957 KIF15Q9NS87 1388 aa20.66■□□□□ 0.9
ATP2A3-215ENST00000576957 ABCC5O15440 1437 aa20.65■□□□□ 0.9
ATP2A3-215ENST00000576957 ERBINQ96RT1 1412 aa20.65■□□□□ 0.9
ATP2A3-215ENST00000576957 PTPN23Q9H3S7 1636 aa20.64■□□□□ 0.9
ATP2A3-215ENST00000576957 TOM1O60784 492 aa20.64■□□□□ 0.89
ATP2A3-215ENST00000576957 CEP152O94986 1710 aa20.64■□□□□ 0.89
ATP2A3-215ENST00000576957 CROCC2H7BZ55 1655 aa20.64■□□□□ 0.89
ATP2A3-215ENST00000576957 VWDEQ8N2E2 1590 aa20.63■□□□□ 0.89
ATP2A3-215ENST00000576957 ARHGAP31Q2M1Z3 1444 aa20.63■□□□□ 0.89
ATP2A3-215ENST00000576957 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
ATP2A3-215ENST00000576957 IQGAP1P46940 1657 aa20.62■□□□□ 0.89
ATP2A3-215ENST00000576957 RRP7BPQ9NSQ0 103 aa20.62■□□□□ 0.89
ATP2A3-215ENST00000576957 DAPK1P53355 1430 aa20.61■□□□□ 0.89
ATP2A3-215ENST00000576957 FGD6Q6ZV73 1430 aa20.61■□□□□ 0.89
ATP2A3-215ENST00000576957 SOCS7O14512 581 aa20.6■□□□□ 0.89
ATP2A3-215ENST00000576957 UBR1Q8IWV7 1749 aa20.58■□□□□ 0.89
ATP2A3-215ENST00000576957 CFAP65Q6ZU64 1925 aaKnown RBP20.58■□□□□ 0.88
ATP2A3-215ENST00000576957 KANK1Q14678 1352 aa20.57■□□□□ 0.88
ATP2A3-215ENST00000576957 PIP4K2BP78356 416 aa20.56■□□□□ 0.88
ATP2A3-215ENST00000576957 ANKRD30AQ9BXX3 1397 aa20.56■□□□□ 0.88
ATP2A3-215ENST00000576957 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
ATP2A3-215ENST00000576957 SCAF11Q99590 1463 aaKnown RBP20.55■□□□□ 0.88
ATP2A3-215ENST00000576957 ARHGAP23Q9P227 1491 aa20.55■□□□□ 0.88
ATP2A3-215ENST00000576957 SLIT1O75093 1534 aa20.54■□□□□ 0.88
ATP2A3-215ENST00000576957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.54■□□□□ 0.88
ATP2A3-215ENST00000576957 HSPA1LP34931 641 aa20.53■□□□□ 0.88
ATP2A3-215ENST00000576957 TXNDC2Q86VQ3 553 aa20.52■□□□□ 0.88
ATP2A3-215ENST00000576957 LMTK2Q8IWU2 1503 aa20.52■□□□□ 0.87
ATP2A3-215ENST00000576957 CHIC2Q9UKJ5 165 aa20.51■□□□□ 0.87
ATP2A3-215ENST00000576957 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
ATP2A3-215ENST00000576957 LRRC7Q96NW7 1537 aa20.51■□□□□ 0.87
ATP2A3-215ENST00000576957 SYNMO15061 1565 aa20.51■□□□□ 0.87
ATP2A3-215ENST00000576957 STRCP1A6NGW2 1772 aa20.5■□□□□ 0.87
ATP2A3-215ENST00000576957 LTKP29376 864 aa20.5■□□□□ 0.87
ATP2A3-215ENST00000576957 ALKQ9UM73 1620 aa20.48■□□□□ 0.87
ATP2A3-215ENST00000576957 ADGRL2O95490 1459 aa20.48■□□□□ 0.87
ATP2A3-215ENST00000576957 KDM5AP29375 1690 aaKnown RBP20.48■□□□□ 0.87
ATP2A3-215ENST00000576957 PIK3C2BO00750 1634 aa20.47■□□□□ 0.87
ATP2A3-215ENST00000576957 TMEM2Q9UHN6 1383 aa20.46■□□□□ 0.87
ATP2A3-215ENST00000576957 STAG3Q9UJ98 1225 aa20.46■□□□□ 0.87
ATP2A3-215ENST00000576957 IDI1Q13907 227 aa20.45■□□□□ 0.86
ATP2A3-215ENST00000576957 EFCAB6Q5THR3 1501 aa20.43■□□□□ 0.86
ATP2A3-215ENST00000576957 NOS1P29475 1434 aa20.43■□□□□ 0.86
ATP2A3-215ENST00000576957 MED1Q15648 1581 aaPredicted RBP20.42■□□□□ 0.86
ATP2A3-215ENST00000576957 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
ATP2A3-215ENST00000576957 SLC52A1Q9NWF4 448 aa20.41■□□□□ 0.86
ATP2A3-215ENST00000576957 ANKRD50Q9ULJ7 1429 aa20.4■□□□□ 0.86
ATP2A3-215ENST00000576957 RPRD2Q5VT52 1461 aaKnown RBP20.39■□□□□ 0.85
ATP2A3-215ENST00000576957 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
ATP2A3-215ENST00000576957 TET3O43151 1660 aa20.35■□□□□ 0.85
ATP2A3-215ENST00000576957 KCNA6P17658 529 aa20.35■□□□□ 0.85
ATP2A3-215ENST00000576957 HRCP23327 699 aa20.35■□□□□ 0.85
ATP2A3-215ENST00000576957 XIRP1Q702N8 1843 aaKnown RBP20.34■□□□□ 0.85
ATP2A3-215ENST00000576957 SLC26A8Q96RN1 970 aa20.31■□□□□ 0.84
ATP2A3-215ENST00000576957 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
ATP2A3-215ENST00000576957 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
ATP2A3-215ENST00000576957 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
ATP2A3-215ENST00000576957 FAM135BQ49AJ0 1406 aa20.29■□□□□ 0.84
ATP2A3-215ENST00000576957 ROCK1Q13464 1354 aa20.29■□□□□ 0.84
ATP2A3-215ENST00000576957 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms