RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 NISCHQ9Y2I1 1504 aa33.06■■■□□ 2.88
ATP2A3-215ENST00000576957 CCDC180Q9P1Z9 1646 aa29.69■■■□□ 2.34
ATP2A3-215ENST00000576957 ABCC9O60706 1549 aa29.65■■■□□ 2.34
ATP2A3-215ENST00000576957 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
ATP2A3-215ENST00000576957 NACADO15069 1562 aa28.09■■■□□ 2.09
ATP2A3-215ENST00000576957 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
ATP2A3-215ENST00000576957 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
ATP2A3-215ENST00000576957 MYO15BQ96JP2 1530 aa27.74■■■□□ 2.03
ATP2A3-215ENST00000576957 PABPN1Q86U42 306 aaKnown RBP eCLIP27.6■■■□□ 2.01
ATP2A3-215ENST00000576957 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
ATP2A3-215ENST00000576957 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
ATP2A3-215ENST00000576957 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
ATP2A3-215ENST00000576957 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
ATP2A3-215ENST00000576957 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
ATP2A3-215ENST00000576957 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
ATP2A3-215ENST00000576957 CC2D2AQ9P2K1 1620 aa26.81■■□□□ 1.88
ATP2A3-215ENST00000576957 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
ATP2A3-215ENST00000576957 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
ATP2A3-215ENST00000576957 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
ATP2A3-215ENST00000576957 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.73
ATP2A3-215ENST00000576957 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
ATP2A3-215ENST00000576957 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
ATP2A3-215ENST00000576957 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
ATP2A3-215ENST00000576957 BAZ1AQ9NRL2 1556 aaPredicted RBP25.68■■□□□ 1.7
ATP2A3-215ENST00000576957 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
ATP2A3-215ENST00000576957 CUX2O14529 1486 aa25.64■■□□□ 1.69
ATP2A3-215ENST00000576957 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
ATP2A3-215ENST00000576957 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
ATP2A3-215ENST00000576957 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
ATP2A3-215ENST00000576957 NESP48681 1621 aa25.46■■□□□ 1.67
ATP2A3-215ENST00000576957 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
ATP2A3-215ENST00000576957 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
ATP2A3-215ENST00000576957 THOC2Q8NI27 1593 aaKnown RBP25.22■■□□□ 1.63
ATP2A3-215ENST00000576957 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
ATP2A3-215ENST00000576957 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
ATP2A3-215ENST00000576957 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
ATP2A3-215ENST00000576957 WIZO95785 1651 aa25.12■■□□□ 1.61
ATP2A3-215ENST00000576957 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
ATP2A3-215ENST00000576957 RSF1Q96T23 1441 aaPredicted RBP24.93■■□□□ 1.58
ATP2A3-215ENST00000576957 WDR62O43379 1518 aa24.91■■□□□ 1.58
ATP2A3-215ENST00000576957 CEP164Q9UPV0 1460 aa24.86■■□□□ 1.57
ATP2A3-215ENST00000576957 CFTRP13569 1480 aa24.84■■□□□ 1.57
ATP2A3-215ENST00000576957 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
ATP2A3-215ENST00000576957 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.56
ATP2A3-215ENST00000576957 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
ATP2A3-215ENST00000576957 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
ATP2A3-215ENST00000576957 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
ATP2A3-215ENST00000576957 OSCARQ8IYS5 282 aa24.47■■□□□ 1.51
ATP2A3-215ENST00000576957 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
ATP2A3-215ENST00000576957 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
ATP2A3-215ENST00000576957 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
ATP2A3-215ENST00000576957 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
ATP2A3-215ENST00000576957 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
ATP2A3-215ENST00000576957 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
ATP2A3-215ENST00000576957 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
ATP2A3-215ENST00000576957 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
ATP2A3-215ENST00000576957 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
ATP2A3-215ENST00000576957 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
ATP2A3-215ENST00000576957 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
ATP2A3-215ENST00000576957 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
ATP2A3-215ENST00000576957 AQRO60306 1485 aaKnown RBP eCLIP24.08■■□□□ 1.458e-7■■■■□ 19.8
ATP2A3-215ENST00000576957 ARHGEF11O15085 1522 aa24.03■■□□□ 1.44
ATP2A3-215ENST00000576957 SOGA1O94964 1423 aa24.01■■□□□ 1.43
ATP2A3-215ENST00000576957 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
ATP2A3-215ENST00000576957 CHD1O14646 1710 aa23.98■■□□□ 1.43
ATP2A3-215ENST00000576957 WDR97A6NE52 1622 aa23.95■■□□□ 1.43
ATP2A3-215ENST00000576957 FGD5Q6ZNL6 1462 aa23.94■■□□□ 1.42
ATP2A3-215ENST00000576957 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
ATP2A3-215ENST00000576957 FBLN2P98095 1184 aa23.93■■□□□ 1.42
ATP2A3-215ENST00000576957 CUX1P39880 1505 aa23.9■■□□□ 1.42
ATP2A3-215ENST00000576957 CYB5RLQ6IPT4 315 aa23.86■■□□□ 1.41
ATP2A3-215ENST00000576957 SNAPC4Q5SXM2 1469 aa23.84■■□□□ 1.41
ATP2A3-215ENST00000576957 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
ATP2A3-215ENST00000576957 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
ATP2A3-215ENST00000576957 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
ATP2A3-215ENST00000576957 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
ATP2A3-215ENST00000576957 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
ATP2A3-215ENST00000576957 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
ATP2A3-215ENST00000576957 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
ATP2A3-215ENST00000576957 SYNJ2O15056 1496 aa23.73■■□□□ 1.39
ATP2A3-215ENST00000576957 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
ATP2A3-215ENST00000576957 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
ATP2A3-215ENST00000576957 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
ATP2A3-215ENST00000576957 ABCA5Q8WWZ7 1642 aa23.63■■□□□ 1.37
ATP2A3-215ENST00000576957 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
ATP2A3-215ENST00000576957 TRHP20396 242 aaPredicted RBP23.6■■□□□ 1.37
ATP2A3-215ENST00000576957 TOP2BQ02880 1626 aa23.54■■□□□ 1.36
ATP2A3-215ENST00000576957 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
ATP2A3-215ENST00000576957 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
ATP2A3-215ENST00000576957 ADAMTS12P58397 1594 aa23.45■■□□□ 1.34
ATP2A3-215ENST00000576957 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
ATP2A3-215ENST00000576957 NUP160Q12769 1436 aa23.42■■□□□ 1.34
ATP2A3-215ENST00000576957 ERICH3Q5RHP9 1530 aa23.41■■□□□ 1.34
ATP2A3-215ENST00000576957 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
ATP2A3-215ENST00000576957 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
ATP2A3-215ENST00000576957 SHROOM2Q13796 1616 aa23.31■■□□□ 1.32
ATP2A3-215ENST00000576957 JPH4Q96JJ6 628 aa23.19■■□□□ 1.3
ATP2A3-215ENST00000576957 PRG4Q92954 1404 aaPredicted RBP23.18■■□□□ 1.3
ATP2A3-215ENST00000576957 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
ATP2A3-215ENST00000576957 KIF27Q86VH2 1401 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms