RNA–Protein interactions for RNA: ENST00000571299.5

SLC12A4-207, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-207ENST00000571299 SCAF1Q9H7N4 1312 aaKnown RBP25.64■■□□□ 1.7
SLC12A4-207ENST00000571299 MED1Q15648 1581 aaPredicted RBP25.63■■□□□ 1.69
SLC12A4-207ENST00000571299 DHX29Q7Z478 1369 aaKnown RBP25.62■■□□□ 1.69
SLC12A4-207ENST00000571299 TNRQ92752 1358 aa25.6■■□□□ 1.69
SLC12A4-207ENST00000571299 ALKQ9UM73 1620 aa25.6■■□□□ 1.69
SLC12A4-207ENST00000571299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.59■■□□□ 1.69
SLC12A4-207ENST00000571299 KIF3BO15066 747 aa25.59■■□□□ 1.69
SLC12A4-207ENST00000571299 SHANK2Q9UPX8 1470 aa25.59■■□□□ 1.69
SLC12A4-207ENST00000571299 RTEL1-TNFRSF6BF6WH68 1400 aa25.58■■□□□ 1.69
SLC12A4-207ENST00000571299 EHBP1L1Q8N3D4 1523 aa25.58■■□□□ 1.68
SLC12A4-207ENST00000571299 VWDEQ8N2E2 1590 aa25.57■■□□□ 1.68
SLC12A4-207ENST00000571299 PZPP20742 1482 aa25.56■■□□□ 1.68
SLC12A4-207ENST00000571299 KDM5DQ9BY66 1539 aa25.55■■□□□ 1.68
SLC12A4-207ENST00000571299 CPS1P31327 1500 aa25.54■■□□□ 1.68
SLC12A4-207ENST00000571299 CEP162Q5TB80 1403 aa25.53■■□□□ 1.68
SLC12A4-207ENST00000571299 STRCP1A6NGW2 1772 aa25.52■■□□□ 1.68
SLC12A4-207ENST00000571299 CAMSAP2Q08AD1 1489 aa25.52■■□□□ 1.68
SLC12A4-207ENST00000571299 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
SLC12A4-207ENST00000571299 CCDC141Q6ZP82 1450 aa25.51■■□□□ 1.67
SLC12A4-207ENST00000571299 WASHC2CQ9Y4E1 1318 aa25.49■■□□□ 1.67
SLC12A4-207ENST00000571299 MIA2Q96PC5 1412 aa25.48■■□□□ 1.67
SLC12A4-207ENST00000571299 TOM1O60784 492 aa25.48■■□□□ 1.67
SLC12A4-207ENST00000571299 UGGT1Q9NYU2 1555 aa25.48■■□□□ 1.67
SLC12A4-207ENST00000571299 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
SLC12A4-207ENST00000571299 ANKLE2Q86XL3 938 aa25.47■■□□□ 1.67
SLC12A4-207ENST00000571299 NPHP4O75161 1426 aaPredicted RBP25.46■■□□□ 1.67
SLC12A4-207ENST00000571299 MED14O60244 1454 aa25.44■■□□□ 1.66
SLC12A4-207ENST00000571299 DEPDC5O75140 1603 aa25.43■■□□□ 1.66
SLC12A4-207ENST00000571299 IQGAP1P46940 1657 aa25.42■■□□□ 1.66
SLC12A4-207ENST00000571299 NLRP1Q9C000 1473 aa25.42■■□□□ 1.66
SLC12A4-207ENST00000571299 THEMISQ8N1K5 641 aaPredicted RBP25.42■■□□□ 1.66
SLC12A4-207ENST00000571299 FAM135AQ9P2D6 1515 aa25.4■■□□□ 1.66
SLC12A4-207ENST00000571299 LRRC7Q96NW7 1537 aa25.39■■□□□ 1.66
SLC12A4-207ENST00000571299 ARHGEF5Q12774 1597 aa25.38■■□□□ 1.65
SLC12A4-207ENST00000571299 ABCC3O15438 1527 aa25.37■■□□□ 1.65
SLC12A4-207ENST00000571299 CFAP65Q6ZU64 1925 aaKnown RBP25.37■■□□□ 1.65
SLC12A4-207ENST00000571299 MROH1Q8NDA8 1641 aa25.36■■□□□ 1.65
SLC12A4-207ENST00000571299 RNF17Q9BXT8 1623 aaKnown RBP25.36■■□□□ 1.65
SLC12A4-207ENST00000571299 ZC3H13Q5T200 1668 aaKnown RBP25.35■■□□□ 1.65
SLC12A4-207ENST00000571299 CEP152O94986 1710 aa25.34■■□□□ 1.65
SLC12A4-207ENST00000571299 ERVK-7P63135 1459 aa25.33■■□□□ 1.65
SLC12A4-207ENST00000571299 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
SLC12A4-207ENST00000571299 UBR1Q8IWV7 1749 aa25.31■■□□□ 1.64
SLC12A4-207ENST00000571299 XIRP1Q702N8 1843 aaKnown RBP25.29■■□□□ 1.64
SLC12A4-207ENST00000571299 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
SLC12A4-207ENST00000571299 TSPY4P0CV99 314 aa25.28■■□□□ 1.64
SLC12A4-207ENST00000571299 TSPY10P0CW01 314 aa25.28■■□□□ 1.64
SLC12A4-207ENST00000571299 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
SLC12A4-207ENST00000571299 LTKP29376 864 aa25.27■■□□□ 1.64
SLC12A4-207ENST00000571299 RGS17Q9UGC6 210 aaPredicted RBP25.27■■□□□ 1.64
SLC12A4-207ENST00000571299 SYNMO15061 1565 aa25.27■■□□□ 1.64
SLC12A4-207ENST00000571299 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
SLC12A4-207ENST00000571299 LRRC9Q6ZRR7 1453 aa25.22■■□□□ 1.63
SLC12A4-207ENST00000571299 KANK4Q5T7N3 995 aaPredicted RBP25.22■■□□□ 1.63
SLC12A4-207ENST00000571299 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
SLC12A4-207ENST00000571299 ARHGAP23Q9P227 1491 aa25.19■■□□□ 1.62
SLC12A4-207ENST00000571299 TXNDC2Q86VQ3 553 aa25.16■■□□□ 1.62
SLC12A4-207ENST00000571299 SLIT1O75093 1534 aa25.16■■□□□ 1.62
SLC12A4-207ENST00000571299 PIK3C2BO00750 1634 aa25.15■■□□□ 1.62
SLC12A4-207ENST00000571299 RBM33Q96EV2 1170 aaKnown RBP25.12■■□□□ 1.61
SLC12A4-207ENST00000571299 DUOX2Q9NRD8 1548 aa25.12■■□□□ 1.61
SLC12A4-207ENST00000571299 PRDM15P57071 1507 aaPredicted RBP25.11■■□□□ 1.61
SLC12A4-207ENST00000571299 MYOM3Q5VTT5 1437 aa25.1■■□□□ 1.61
SLC12A4-207ENST00000571299 VPS8Q8N3P4 1428 aa25.1■■□□□ 1.61
SLC12A4-207ENST00000571299 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
SLC12A4-207ENST00000571299 POTEAQ6S8J7 498 aa25.08■■□□□ 1.61
SLC12A4-207ENST00000571299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.08■■□□□ 1.61
SLC12A4-207ENST00000571299 ARHGAP31Q2M1Z3 1444 aa25.07■■□□□ 1.6
SLC12A4-207ENST00000571299 RRP7BPQ9NSQ0 103 aa25.07■■□□□ 1.6
SLC12A4-207ENST00000571299 KIF15Q9NS87 1388 aa25.06■■□□□ 1.6
SLC12A4-207ENST00000571299 CROCC2H7BZ55 1655 aa25.06■■□□□ 1.6
SLC12A4-207ENST00000571299 ABCC5O15440 1437 aa25.05■■□□□ 1.6
SLC12A4-207ENST00000571299 TMEM94Q12767 1356 aa25.05■■□□□ 1.6
SLC12A4-207ENST00000571299 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
SLC12A4-207ENST00000571299 MAP3K1Q13233 1512 aa25.04■■□□□ 1.6
SLC12A4-207ENST00000571299 ROBO1Q9Y6N7 1651 aa25.03■■□□□ 1.6
SLC12A4-207ENST00000571299 SLC26A8Q96RN1 970 aa25.02■■□□□ 1.6
SLC12A4-207ENST00000571299 FAM135BQ49AJ0 1406 aa25.02■■□□□ 1.6
SLC12A4-207ENST00000571299 EID1Q9Y6B2 187 aa25.01■■□□□ 1.59
SLC12A4-207ENST00000571299 TET3O43151 1660 aa25.01■■□□□ 1.59
SLC12A4-207ENST00000571299 IDI1Q13907 227 aa25■■□□□ 1.59
SLC12A4-207ENST00000571299 ERBINQ96RT1 1412 aa24.99■■□□□ 1.59
SLC12A4-207ENST00000571299 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
SLC12A4-207ENST00000571299 PTPN23Q9H3S7 1636 aa24.97■■□□□ 1.59
SLC12A4-207ENST00000571299 EFCAB6Q5THR3 1501 aa24.97■■□□□ 1.59
SLC12A4-207ENST00000571299 STAG3Q9UJ98 1225 aa24.95■■□□□ 1.58
SLC12A4-207ENST00000571299 DAPK1P53355 1430 aa24.95■■□□□ 1.58
SLC12A4-207ENST00000571299 KCNA6P17658 529 aa24.94■■□□□ 1.58
SLC12A4-207ENST00000571299 PROSER2Q86WR7 435 aaPredicted RBP24.94■■□□□ 1.58
SLC12A4-207ENST00000571299 CHIC2Q9UKJ5 165 aa24.94■■□□□ 1.58
SLC12A4-207ENST00000571299 KDM5AP29375 1690 aaKnown RBP24.91■■□□□ 1.58
SLC12A4-207ENST00000571299 LMTK2Q8IWU2 1503 aa24.91■■□□□ 1.58
SLC12A4-207ENST00000571299 NWD1Q149M9 1564 aa24.9■■□□□ 1.58
SLC12A4-207ENST00000571299 NOS1P29475 1434 aa24.89■■□□□ 1.58
SLC12A4-207ENST00000571299 ADGRB3O60242 1522 aa24.89■■□□□ 1.57
SLC12A4-207ENST00000571299 MYO5BQ9ULV0 1848 aa24.89■■□□□ 1.57
SLC12A4-207ENST00000571299 PHLPP1O60346 1717 aa24.86■■□□□ 1.57
SLC12A4-207ENST00000571299 KANK1Q14678 1352 aa24.86■■□□□ 1.57
SLC12A4-207ENST00000571299 FGD6Q6ZV73 1430 aa24.84■■□□□ 1.57
SLC12A4-207ENST00000571299 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms