RNA–Protein interactions for RNA: ENST00000571299.5

SLC12A4-207, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-207ENST00000571299 NISCHQ9Y2I1 1504 aa40.38■■■■■ 4.06
SLC12A4-207ENST00000571299 ABCC9O60706 1549 aa36.97■■■■□ 3.51
SLC12A4-207ENST00000571299 CCDC180Q9P1Z9 1646 aa36.34■■■■□ 3.41
SLC12A4-207ENST00000571299 DNAJC5BQ9UF47 199 aa35.21■■■■□ 3.23
SLC12A4-207ENST00000571299 RB1CC1Q8TDY2 1594 aa34.82■■■■□ 3.16
SLC12A4-207ENST00000571299 NACADO15069 1562 aa34.45■■■■□ 3.11
SLC12A4-207ENST00000571299 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.12e-9■□□□□ 10.9
SLC12A4-207ENST00000571299 DCAF8L2P0C7V8 631 aa34.33■■■■□ 3.09
SLC12A4-207ENST00000571299 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
SLC12A4-207ENST00000571299 BICRAQ9NZM4 1560 aa34.01■■■■□ 3.03
SLC12A4-207ENST00000571299 MYO15BQ96JP2 1530 aa33.76■■■■□ 3
SLC12A4-207ENST00000571299 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
SLC12A4-207ENST00000571299 CC2D2AQ9P2K1 1620 aa33.34■■■□□ 2.93
SLC12A4-207ENST00000571299 CECR2Q9BXF3 1484 aa33.27■■■□□ 2.92
SLC12A4-207ENST00000571299 SCRIBQ14160 1630 aa33.26■■■□□ 2.91
SLC12A4-207ENST00000571299 DCAF1Q9Y4B6 1507 aa33.21■■■□□ 2.91
SLC12A4-207ENST00000571299 SHROOM4Q9ULL8 1493 aa33.18■■■□□ 2.9
SLC12A4-207ENST00000571299 EIF4G1Q04637 1599 aaKnown RBP33.13■■■□□ 2.89
SLC12A4-207ENST00000571299 DNAJC5Q9H3Z4 198 aa32.45■■■□□ 2.79
SLC12A4-207ENST00000571299 CUX2O14529 1486 aa31.87■■■□□ 2.69
SLC12A4-207ENST00000571299 NCAPD3P42695 1498 aa31.85■■■□□ 2.69
SLC12A4-207ENST00000571299 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
SLC12A4-207ENST00000571299 ATAD2BQ9ULI0 1458 aa31.76■■■□□ 2.67
SLC12A4-207ENST00000571299 NESP48681 1621 aa31.69■■■□□ 2.66
SLC12A4-207ENST00000571299 SMARCA4P51532 1647 aa31.62■■■□□ 2.65
SLC12A4-207ENST00000571299 HMGXB3Q12766 1538 aa31.55■■■□□ 2.64
SLC12A4-207ENST00000571299 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
SLC12A4-207ENST00000571299 BAZ1BQ9UIG0 1483 aaKnown RBP31.38■■■□□ 2.61
SLC12A4-207ENST00000571299 THOC2Q8NI27 1593 aaKnown RBP31.38■■■□□ 2.61
SLC12A4-207ENST00000571299 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
SLC12A4-207ENST00000571299 PEG3Q9GZU2 1588 aa31.24■■■□□ 2.59
SLC12A4-207ENST00000571299 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
SLC12A4-207ENST00000571299 MROH2BQ7Z745 1585 aa31.21■■■□□ 2.59
SLC12A4-207ENST00000571299 LAMC3Q9Y6N6 1575 aa31.18■■■□□ 2.58
SLC12A4-207ENST00000571299 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
SLC12A4-207ENST00000571299 TRIM41Q8WV44 630 aa30.93■■■□□ 2.54
SLC12A4-207ENST00000571299 CADPSQ9ULU8 1353 aa30.87■■■□□ 2.53
SLC12A4-207ENST00000571299 WIZO95785 1651 aa30.83■■■□□ 2.53
SLC12A4-207ENST00000571299 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.52
SLC12A4-207ENST00000571299 WDR62O43379 1518 aa30.78■■■□□ 2.52
SLC12A4-207ENST00000571299 CEP164Q9UPV0 1460 aa30.6■■■□□ 2.49
SLC12A4-207ENST00000571299 FANCD2Q9BXW9 1451 aa30.56■■■□□ 2.48
SLC12A4-207ENST00000571299 CFTRP13569 1480 aa30.44■■■□□ 2.46
SLC12A4-207ENST00000571299 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
SLC12A4-207ENST00000571299 OSCARQ8IYS5 282 aa30.35■■■□□ 2.45
SLC12A4-207ENST00000571299 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
SLC12A4-207ENST00000571299 TOP2AP11388 1531 aaKnown RBP30.28■■■□□ 2.44
SLC12A4-207ENST00000571299 RIMBP3CA6NJZ7 1639 aa30.15■■■□□ 2.42
SLC12A4-207ENST00000571299 RIMBP3BA6NNM3 1639 aa30.15■■■□□ 2.42
SLC12A4-207ENST00000571299 RIMBP3Q9UFD9 1639 aa30.15■■■□□ 2.42
SLC12A4-207ENST00000571299 ZNF608Q9ULD9 1512 aaPredicted RBP30.15■■■□□ 2.42
SLC12A4-207ENST00000571299 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
SLC12A4-207ENST00000571299 CCDC88BA6NC98 1476 aa30.01■■■□□ 2.4
SLC12A4-207ENST00000571299 IFT140Q96RY7 1462 aa29.98■■■□□ 2.39
SLC12A4-207ENST00000571299 ARHGEF11O15085 1522 aa29.96■■■□□ 2.39
SLC12A4-207ENST00000571299 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
SLC12A4-207ENST00000571299 EIF4G3O43432 1585 aaKnown RBP29.89■■■□□ 2.38
SLC12A4-207ENST00000571299 CYB5RLQ6IPT4 315 aa29.79■■■□□ 2.36
SLC12A4-207ENST00000571299 AQRO60306 1485 aaKnown RBP eCLIP29.79■■■□□ 2.366e-7■■■■□ 22.4
SLC12A4-207ENST00000571299 CHD1O14646 1710 aa29.79■■■□□ 2.36
SLC12A4-207ENST00000571299 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
SLC12A4-207ENST00000571299 TARBP1Q13395 1621 aaKnown RBP29.75■■■□□ 2.35
SLC12A4-207ENST00000571299 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
SLC12A4-207ENST00000571299 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
SLC12A4-207ENST00000571299 POLA1P09884 1462 aaPredicted RBP29.63■■■□□ 2.33
SLC12A4-207ENST00000571299 FBLN2P98095 1184 aa29.62■■■□□ 2.33
SLC12A4-207ENST00000571299 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
SLC12A4-207ENST00000571299 TRHP20396 242 aaPredicted RBP29.56■■■□□ 2.32
SLC12A4-207ENST00000571299 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
SLC12A4-207ENST00000571299 SOGA1O94964 1423 aa29.45■■■□□ 2.3
SLC12A4-207ENST00000571299 SNAPC4Q5SXM2 1469 aa29.43■■■□□ 2.3
SLC12A4-207ENST00000571299 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
SLC12A4-207ENST00000571299 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
SLC12A4-207ENST00000571299 CUX1P39880 1505 aa29.33■■■□□ 2.29
SLC12A4-207ENST00000571299 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
SLC12A4-207ENST00000571299 SYNJ1O43426 1573 aa29.23■■■□□ 2.27
SLC12A4-207ENST00000571299 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
SLC12A4-207ENST00000571299 WDR97A6NE52 1622 aa29.21■■■□□ 2.27
SLC12A4-207ENST00000571299 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
SLC12A4-207ENST00000571299 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
SLC12A4-207ENST00000571299 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
SLC12A4-207ENST00000571299 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
SLC12A4-207ENST00000571299 ERCC6L2Q5T890 1561 aa29.05■■■□□ 2.24
SLC12A4-207ENST00000571299 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
SLC12A4-207ENST00000571299 ABCA10Q8WWZ4 1543 aa28.96■■■□□ 2.23
SLC12A4-207ENST00000571299 AEBP2Q6ZN18 517 aaPredicted RBP28.94■■■□□ 2.22
SLC12A4-207ENST00000571299 CEP170Q5SW79 1584 aa28.88■■■□□ 2.21
SLC12A4-207ENST00000571299 GRIN2AQ12879 1464 aa28.87■■■□□ 2.21
SLC12A4-207ENST00000571299 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
SLC12A4-207ENST00000571299 NUP160Q12769 1436 aa28.78■■■□□ 2.2
SLC12A4-207ENST00000571299 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
SLC12A4-207ENST00000571299 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
SLC12A4-207ENST00000571299 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
SLC12A4-207ENST00000571299 BIVM-ERCC5R4GMW8 1640 aa28.68■■■□□ 2.18
SLC12A4-207ENST00000571299 KIF13AQ9H1H9 1805 aa28.66■■■□□ 2.18
SLC12A4-207ENST00000571299 TOP2BQ02880 1626 aa28.65■■■□□ 2.18
SLC12A4-207ENST00000571299 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
SLC12A4-207ENST00000571299 PRG4Q92954 1404 aaPredicted RBP28.56■■■□□ 2.16
SLC12A4-207ENST00000571299 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
SLC12A4-207ENST00000571299 JPH4Q96JJ6 628 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms