RNA–Protein interactions for RNA: ENST00000571011.1

TRAP1-205, Transcript of TNF receptor associated protein 1, human

TSL 5

Gene TRAP1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAP1-205	ENST00000571011	WASHC2C	Q9Y4E1	1318 aa		33.38	■■■□□ 2.93
TRAP1-205	ENST00000571011	MYO3A	Q8NEV4	1616 aa		33.38	■■■□□ 2.93
TRAP1-205	ENST00000571011	KDM5D	Q9BY66	1539 aa		33.38	■■■□□ 2.93
TRAP1-205	ENST00000571011	ZNF142	P52746	1687 aa	Predicted RBP	33.37	■■■□□ 2.93
TRAP1-205	ENST00000571011	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.34	■■■□□ 2.93
TRAP1-205	ENST00000571011	PZP	P20742	1482 aa		33.31	■■■□□ 2.92
TRAP1-205	ENST00000571011	PLA2R1	Q13018	1463 aa		33.31	■■■□□ 2.92
TRAP1-205	ENST00000571011	PKD2	Q13563	968 aa		33.3	■■■□□ 2.92
TRAP1-205	ENST00000571011	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.3	■■■□□ 2.92
TRAP1-205	ENST00000571011	A2ML1	A8K2U0	1454 aa		33.29	■■■□□ 2.92
TRAP1-205	ENST00000571011	NCKAP5L	Q9HCH0	1330 aa		33.28	■■■□□ 2.92
TRAP1-205	ENST00000571011	TNR	Q92752	1358 aa		33.28	■■■□□ 2.92
TRAP1-205	ENST00000571011	RNF17	Q9BXT8	1623 aa	Known RBP	33.27	■■■□□ 2.92
TRAP1-205	ENST00000571011	PTPN23	Q9H3S7	1636 aa		33.26	■■■□□ 2.91
TRAP1-205	ENST00000571011	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.25	■■■□□ 2.91
TRAP1-205	ENST00000571011	TCOF1	Q13428	1488 aa	Known RBP	33.25	■■■□□ 2.91
TRAP1-205	ENST00000571011	ABCC5	O15440	1437 aa		33.24	■■■□□ 2.91
TRAP1-205	ENST00000571011	SHANK2	Q9UPX8	1470 aa		33.24	■■■□□ 2.91
TRAP1-205	ENST00000571011	FGD6	Q6ZV73	1430 aa		33.23	■■■□□ 2.91
TRAP1-205	ENST00000571011	DUOX2	Q9NRD8	1548 aa		33.23	■■■□□ 2.91
TRAP1-205	ENST00000571011	DNMT1	P26358	1616 aa	Known RBP	33.21	■■■□□ 2.91
TRAP1-205	ENST00000571011	LTBP4	Q8N2S1	1624 aa		33.2	■■■□□ 2.91
TRAP1-205	ENST00000571011	ABCC3	O15438	1527 aa		33.18	■■■□□ 2.9
TRAP1-205	ENST00000571011	KIF15	Q9NS87	1388 aa		33.18	■■■□□ 2.9
TRAP1-205	ENST00000571011	DAPK1	P53355	1430 aa		33.17	■■■□□ 2.9
TRAP1-205	ENST00000571011	CROCC2	H7BZ55	1655 aa		33.16	■■■□□ 2.9
TRAP1-205	ENST00000571011	ZC3H13	Q5T200	1668 aa	Known RBP	33.16	■■■□□ 2.9
TRAP1-205	ENST00000571011	MROH1	Q8NDA8	1641 aa		33.14	■■■□□ 2.9
TRAP1-205	ENST00000571011	NLRP1	Q9C000	1473 aa		33.14	■■■□□ 2.9
TRAP1-205	ENST00000571011	RRP7BP	Q9NSQ0	103 aa		33.14	■■■□□ 2.9
TRAP1-205	ENST00000571011	ERBIN	Q96RT1	1412 aa		33.12	■■■□□ 2.89
TRAP1-205	ENST00000571011	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.11	■■■□□ 2.89
TRAP1-205	ENST00000571011	IQSEC2	Q5JU85	1478 aa		33.11	■■■□□ 2.89
TRAP1-205	ENST00000571011	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.08	■■■□□ 2.89
TRAP1-205	ENST00000571011	SPATA31D1	Q6ZQQ2	1576 aa		33.07	■■■□□ 2.88
TRAP1-205	ENST00000571011	ANKRD30A	Q9BXX3	1397 aa		33.05	■■■□□ 2.88
TRAP1-205	ENST00000571011	UGGT1	Q9NYU2	1555 aa		33.04	■■■□□ 2.88
TRAP1-205	ENST00000571011	ANKLE2	Q86XL3	938 aa		33.04	■■■□□ 2.88
TRAP1-205	ENST00000571011	ERVK-7	P63135	1459 aa		33.04	■■■□□ 2.88
TRAP1-205	ENST00000571011	PRDM15	P57071	1507 aa	Predicted RBP	33.03	■■■□□ 2.88
TRAP1-205	ENST00000571011	CHIC2	Q9UKJ5	165 aa		33.03	■■■□□ 2.88
TRAP1-205	ENST00000571011	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.03	■■■□□ 2.88	3e-7	■□□□□ 9.3
TRAP1-205	ENST00000571011	CEP152	O94986	1710 aa		33.02	■■■□□ 2.88
TRAP1-205	ENST00000571011	ARHGAP31	Q2M1Z3	1444 aa		33.01	■■■□□ 2.87
TRAP1-205	ENST00000571011	POLR1A	O95602	1720 aa	Predicted RBP	32.99	■■■□□ 2.87
TRAP1-205	ENST00000571011	NEURL4	Q96JN8	1562 aa		32.99	■■■□□ 2.87
TRAP1-205	ENST00000571011	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.97	■■■□□ 2.87	5e-11	■□□□□ 8.7
TRAP1-205	ENST00000571011	DEPDC5	O75140	1603 aa		32.97	■■■□□ 2.87
TRAP1-205	ENST00000571011	FAM50A	Q14320	339 aa	Known RBP	32.96	■■■□□ 2.87
TRAP1-205	ENST00000571011	CFAP65	Q6ZU64	1925 aa	Known RBP	32.96	■■■□□ 2.87
TRAP1-205	ENST00000571011	KANK1	Q14678	1352 aa		32.96	■■■□□ 2.87
TRAP1-205	ENST00000571011	ADGRL2	O95490	1459 aa		32.94	■■■□□ 2.86
TRAP1-205	ENST00000571011	MED14	O60244	1454 aa		32.93	■■■□□ 2.86
TRAP1-205	ENST00000571011	NPHP4	O75161	1426 aa	Predicted RBP	32.89	■■■□□ 2.86
TRAP1-205	ENST00000571011	LMTK2	Q8IWU2	1503 aa		32.87	■■■□□ 2.85
TRAP1-205	ENST00000571011	VWDE	Q8N2E2	1590 aa		32.87	■■■□□ 2.85
TRAP1-205	ENST00000571011	UBR1	Q8IWV7	1749 aa		32.83	■■■□□ 2.85
TRAP1-205	ENST00000571011	CPS1	P31327	1500 aa		32.82	■■■□□ 2.85
TRAP1-205	ENST00000571011	UBAP1L	F5GYI3	381 aa		32.82	■■■□□ 2.84
TRAP1-205	ENST00000571011	ANKRD50	Q9ULJ7	1429 aa		32.8	■■■□□ 2.84
TRAP1-205	ENST00000571011	IQGAP1	P46940	1657 aa		32.78	■■■□□ 2.84
TRAP1-205	ENST00000571011	ARHGAP23	Q9P227	1491 aa		32.76	■■■□□ 2.84
TRAP1-205	ENST00000571011	SLIT1	O75093	1534 aa		32.76	■■■□□ 2.83
TRAP1-205	ENST00000571011	SCAF11	Q99590	1463 aa	Known RBP	32.74	■■■□□ 2.83
TRAP1-205	ENST00000571011	LTK	P29376	864 aa		32.73	■■■□□ 2.83
TRAP1-205	ENST00000571011	TXNDC2	Q86VQ3	553 aa		32.73	■■■□□ 2.83
TRAP1-205	ENST00000571011	EFCAB6	Q5THR3	1501 aa		32.72	■■■□□ 2.83
TRAP1-205	ENST00000571011	IDI1	Q13907	227 aa		32.72	■■■□□ 2.83
TRAP1-205	ENST00000571011	NOS1	P29475	1434 aa		32.71	■■■□□ 2.83
TRAP1-205	ENST00000571011	ROCK1	Q13464	1354 aa		32.7	■■■□□ 2.83
TRAP1-205	ENST00000571011	PIK3C2B	O00750	1634 aa		32.7	■■■□□ 2.83
TRAP1-205	ENST00000571011	EID1	Q9Y6B2	187 aa		32.7	■■■□□ 2.83
TRAP1-205	ENST00000571011	STAG3	Q9UJ98	1225 aa		32.69	■■■□□ 2.82
TRAP1-205	ENST00000571011	TMEM2	Q9UHN6	1383 aa		32.69	■■■□□ 2.82
TRAP1-205	ENST00000571011	KDM5A	P29375	1690 aa	Known RBP	32.67	■■■□□ 2.82
TRAP1-205	ENST00000571011	SYNM	O15061	1565 aa		32.66	■■■□□ 2.82
TRAP1-205	ENST00000571011	SLC52A1	Q9NWF4	448 aa		32.66	■■■□□ 2.82
TRAP1-205	ENST00000571011	RPRD2	Q5VT52	1461 aa	Known RBP	32.66	■■■□□ 2.82
TRAP1-205	ENST00000571011	TOM1	O60784	492 aa		32.65	■■■□□ 2.82
TRAP1-205	ENST00000571011	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.62	■■■□□ 2.81
TRAP1-205	ENST00000571011	STRCP1	A6NGW2	1772 aa		32.59	■■■□□ 2.81
TRAP1-205	ENST00000571011	TET3	O43151	1660 aa		32.59	■■■□□ 2.81
TRAP1-205	ENST00000571011	UNC13B	O14795	1591 aa		32.58	■■■□□ 2.81
TRAP1-205	ENST00000571011	DISP3	Q9P2K9	1392 aa		32.57	■■■□□ 2.8
TRAP1-205	ENST00000571011	LRRC7	Q96NW7	1537 aa		32.56	■■■□□ 2.8
TRAP1-205	ENST00000571011	ADGRB3	O60242	1522 aa		32.55	■■■□□ 2.8
TRAP1-205	ENST00000571011	ITGAE	P38570	1179 aa		32.54	■■■□□ 2.8
TRAP1-205	ENST00000571011	PIP4K2B	P78356	416 aa		32.54	■■■□□ 2.8
TRAP1-205	ENST00000571011	GCC2	Q8IWJ2	1684 aa		32.52	■■■□□ 2.8
TRAP1-205	ENST00000571011	SCAF1	Q9H7N4	1312 aa	Known RBP	32.51	■■■□□ 2.8
TRAP1-205	ENST00000571011	ALK	Q9UM73	1620 aa		32.47	■■■□□ 2.79
TRAP1-205	ENST00000571011	NUP155	O75694	1391 aa		32.46	■■■□□ 2.79
TRAP1-205	ENST00000571011	HSPA1L	P34931	641 aa		32.46	■■■□□ 2.79
TRAP1-205	ENST00000571011	IQGAP3	Q86VI3	1631 aa		32.46	■■■□□ 2.79
TRAP1-205	ENST00000571011	RRBP1	Q9P2E9	1410 aa	Known RBP	32.43	■■■□□ 2.78
TRAP1-205	ENST00000571011		E9PCH4	1651 aa		32.43	■■■□□ 2.78
TRAP1-205	ENST00000571011	HDGF	P51858	240 aa	Known RBP	32.42	■■■□□ 2.78
TRAP1-205	ENST00000571011	SLC26A8	Q96RN1	970 aa		32.42	■■■□□ 2.78
TRAP1-205	ENST00000571011	KCNA6	P17658	529 aa		32.41	■■■□□ 2.78
TRAP1-205	ENST00000571011	ZFYVE9	O95405	1425 aa		32.41	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms